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Knotify: An Efficient Parallel Platform for RNA Pseudoknot Prediction Using Syntactic Pattern Recognition.
Methods Protoc. 2022 Feb 2;5(1):14. doi: 10.3390/mps5010014.
Methods Protoc. 2022.
PMID: 35200530
Free PMC article.
Knotify+: Toward the Prediction of RNA H-Type Pseudoknots, Including Bulges and Internal Loops.
Makris E, Kolaitis A, Andrikos C, Moulos V, Tsanakas P, Pavlatos C.
Makris E, et al. Among authors: pavlatos c.
Biomolecules. 2023 Feb 6;13(2):308. doi: 10.3390/biom13020308.
Biomolecules. 2023.
PMID: 36830677
Free PMC article.
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Knotify_V2.0: Deciphering RNA Secondary Structures with H-Type Pseudoknots and Hairpin Loops.
Kolaitis A, Makris E, Karagiannis AA, Tsanakas P, Pavlatos C.
Kolaitis A, et al. Among authors: pavlatos c.
Genes (Basel). 2024 May 23;15(6):670. doi: 10.3390/genes15060670.
Genes (Basel). 2024.
PMID: 38927606
Free PMC article.
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