Cyclops: Cyclic Coordinate Descent for Logistic, Poisson and Survival
Analysis
This model fitting tool incorporates cyclic coordinate descent and
majorization-minimization approaches to fit a variety of regression models
found in large-scale observational healthcare data. Implementations focus
on computational optimization and fine-scale parallelization to yield
efficient inference in massive datasets. Please see:
Suchard, Simpson, Zorych, Ryan and Madigan (2013) <doi:10.1145/2414416.2414791>.
| Version: |
3.5.0 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
rlang, Matrix, Rcpp (≥ 0.12.12), Andromeda (≥ 0.3.1), dplyr, methods, survival, bit64 |
| LinkingTo: |
Rcpp, RcppEigen (≥ 0.3.2), RcppParallel |
| Suggests: |
testthat, readr, MASS, gnm, ggplot2, microbenchmark, cmprsk |
| Published: |
2024-12-02 |
| DOI: |
10.32614/CRAN.package.Cyclops |
| Author: |
Marc A. Suchard [aut, cre],
Martijn J. Schuemie [aut],
Trevor R. Shaddox [aut],
Yuxi Tian [aut],
Jianxiao Yang [aut],
Eric Kawaguchi [aut],
Sushil Mittal [ctb],
Observational Health Data Sciences and Informatics [cph],
Marcus Geelnard [cph, ctb] (provided the TinyThread library),
Rutgers University [cph, ctb] (provided the HParSearch routine),
R Development Core Team [cph, ctb] (provided the ZeroIn routine) |
| Maintainer: |
Marc A. Suchard <msuchard at ucla.edu> |
| BugReports: |
https://github.com/ohdsi/cyclops/issues |
| License: |
Apache License 2.0 |
| URL: |
https://github.com/ohdsi/cyclops |
| NeedsCompilation: |
yes |
| Citation: |
Cyclops citation info |
| Materials: |
README NEWS |
| In views: |
Survival |
| CRAN checks: |
Cyclops results |
Documentation:
Downloads:
Reverse dependencies:
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