GOCompare: Comprehensive GO Terms Comparison Between Species
Supports the assessment of functional enrichment analyses obtained for several lists of genes and provides a workflow to analyze them between two species via weighted graphs. Methods are described in Sosa et al. (2023) <doi:10.1016/j.ygeno.2022.110528>.
| Version: |
1.0.2.1 |
| Depends: |
R (≥ 4.0.0) |
| Imports: |
base (≥ 3.5), utils (≥ 3.5), methods (≥ 3.5), stats, grDevices, ape, vegan, ggplot2, ggrepel, igraph, parallel, stringr, mathjaxr |
| Suggests: |
testthat (≥ 3.0.0) |
| Published: |
2022-12-09 |
| DOI: |
10.32614/CRAN.package.GOCompare |
| Author: |
Chrystian Camilo Sosa
 [aut, cre,
cph],
Diana Carolina Clavijo-Buriticá [aut],
Mauricio Alberto Quimbaya [aut],
Maria Victoria Diaz [ctb],
Camila Riccio Rengifo [ctb],
Nicolas López-Rozo [ctb],
Victor Hugo García Merchán [aut, ctb],
Arlen James Mosquera [ctb],
Andrés Álvarez [ctb] |
| Maintainer: |
Chrystian Camilo Sosa <ccsosaa at javerianacali.edu.co> |
| BugReports: |
https://github.com/ccsosa/GOCompare/issues |
| License: |
GPL (≥ 3) |
| URL: |
https://github.com/ccsosa/GOCompare |
| NeedsCompilation: |
no |
| CRAN checks: |
GOCompare results |
Documentation:
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