TMB: Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'
With this tool, a user should be able to quickly implement
complex random effect models through simple C++ templates. The package combines
'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector
library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain
an efficient implementation of the applied Laplace approximation with exact
derivatives. Key features are: Automatic sparseness detection, parallelism
through 'BLAS' and parallel user templates.
| Version: |
1.9.16 |
| Depends: |
R (≥ 3.0.0) |
| Imports: |
graphics, methods, stats, utils, Matrix (≥ 1.0-12) |
| LinkingTo: |
Matrix, RcppEigen |
| Suggests: |
numDeriv, parallel |
| Published: |
2025-01-08 |
| DOI: |
10.32614/CRAN.package.TMB |
| Author: |
Kasper Kristensen [aut, cre, cph],
Brad Bell [cph],
Hans Skaug [ctb],
Arni Magnusson [ctb],
Casper Berg [ctb],
Anders Nielsen [ctb],
Martin Maechler [ctb],
Theo Michelot [ctb],
Mollie Brooks [ctb],
Alex Forrence [ctb],
Christoffer Moesgaard Albertsen [ctb],
Cole Monnahan [ctb] |
| Maintainer: |
Kasper Kristensen <kaskr at dtu.dk> |
| BugReports: |
https://github.com/kaskr/adcomp/issues |
| License: |
GPL-2 |
| Copyright: |
See the file COPYRIGHTS
TMB copyright details |
| URL: |
https://github.com/kaskr/adcomp/wiki |
| NeedsCompilation: |
yes |
| Citation: |
TMB citation info |
| Materials: |
NEWS |
| In views: |
Environmetrics, MixedModels |
| CRAN checks: |
TMB results |
Documentation:
Downloads:
Reverse dependencies:
| Reverse depends: |
ef, gllvm, hmmTMB, phylosem |
| Reverse imports: |
ASMbook, bage, BayesGP, clustTMB, disaggregation, DLMtool, dsem, ecostate, epigrowthfit, fishmethods, FRK, gadget3, GeoAdjust, glmmTMB, LocalCop, marked, MLZ, mmrm, QFASA, RNAdecay, RTMB, SAMtool, sdmTMB, SPAS, SpatialGEV, ssdtools, stelfi, tmbstan, tramME, tsdistributions, tsgarch, unmarked |
| Reverse linking to: |
bage, BayesGP, clustTMB, disaggregation, DLMtool, dsem, ef, epigrowthfit, fishmethods, FRK, GeoAdjust, gllvm, glmmTMB, hmmTMB, LocalCop, MLZ, mmrm, phylosem, QFASA, RTMB, SAMtool, sdmTMB, SPAS, SpatialGEV, ssdtools, stelfi, tmbstan, tramME, tsdistributions, tsgarch, unmarked |
| Reverse suggests: |
adnuts, broom.mixed, covafillr, insight, MSEtool, parameters, sjPlot |
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=TMB
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