umiAnalyzer: Tools for Analyzing Sequencing Data with Unique Molecular
Identifiers
Tools for analyzing sequencing data containing unique
molecular identifiers generated by 'UMIErrorCorrect'
(<https://github.com/stahlberggroup/umierrorcorrect>).
| Version: |
1.0.0 |
| Depends: |
R (≥ 4.1.0) |
| Imports: |
BiocManager, dplyr (≥ 0.7.5), DT (≥ 0.19), forcats (≥
0.5.0), ggplot2 (≥ 2.2.1), graphics, grDevices, gridExtra (≥
2.3), magrittr (≥ 1.5), methods, pheatmap (≥ 1.0.12), plotly (≥ 4.9.2.1), readr (≥ 1.1.1), Rsamtools (≥ 1.32.3), scales (≥ 1.1.0), shiny (≥ 1.7.1), shinydashboard (≥ 0.7.2), shinyFiles (≥ 0.9.0), shinyWidgets (≥ 0.6.2), stats, stringr (≥ 1.4.0), tibble (≥ 1.4.2), tidyr (≥ 0.8.1), utils, viridis (≥ 0.5.1) |
| Suggests: |
knitr (≥ 1.27), rmarkdown (≥ 2.1) |
| Published: |
2021-11-25 |
| DOI: |
10.32614/CRAN.package.umiAnalyzer |
| Author: |
Stefan Filges 
[aut, cre] (<https://orcid.org/0000-0002-5994-6699>),
Gustav Johansson [ctb] |
| Maintainer: |
Stefan Filges <stefan.filges at gu.se> |
| BugReports: |
https://github.com/sfilges/umiAnalyzer/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/sfilges/umiAnalyzer |
| NeedsCompilation: |
no |
| Language: |
en-US |
| Materials: |
README NEWS |
| CRAN checks: |
umiAnalyzer results |
Documentation:
Downloads:
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