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invivoPKfit: Fits Toxicokinetic Models to In Vivo PK Data Sets

Takes in vivo toxicokinetic concentration-time data and fits parameters of 1-compartment and 2-compartment models for each chemical. These methods are described in detail in "Informatics for Toxicokinetics" (submitted).

Version: 2.0.0
Depends: R (≥ 3.5.0)
Imports: cli, devtools, dplyr, ggplot2, glue, httk, magrittr, MASS, Matrix, multidplyr (≥ 0.1.3), numDeriv, optimx, PK, pracma, purrr, rlang, scales, tibble, tidyr, tidyselect
Suggests: cowplot, knitr, RColorBrewer, rmarkdown, stringr, testthat (≥ 3.0.0), tidyverse
Published: 2025-01-09
DOI: 10.32614/CRAN.package.invivoPKfit
Author: John Wambaugh ORCID iD [aut, cre], Caroline Ring ORCID iD [aut], Gilberto Padilla Mercado ORCID iD [aut], Chris Cook [aut]
Maintainer: John Wambaugh <wambaugh.john at epa.gov>
License: GPL-3
NeedsCompilation: no
Materials: NEWS
CRAN checks: invivoPKfit results

Documentation:

Reference manual: invivoPKfit.pdf
Vignettes: invivoPKfit User Guide (source, R code)
Wambaugh et al. (2018): Estimating TK Parameters from In Vivo Data (source, R code)
manuscript2023 (source, R code)
Informatics for toxicokinetics (source, R code)

Downloads:

Package source: invivoPKfit_2.0.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): invivoPKfit_2.0.0.tgz, r-oldrel (arm64): invivoPKfit_2.0.0.tgz, r-release (x86_64): invivoPKfit_2.0.0.tgz, r-oldrel (x86_64): invivoPKfit_2.0.0.tgz

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