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Journal of Biomedical Informatics, Volume 57
Volume 57, October 2015
- Bin Liu, Min Jin, Pan Zeng
:
Prioritization of candidate disease genes by combining topological similarity and semantic similarity. 1-5 - Samira Noferesti, Mehrnoush Shamsfard
:
Using Linked Data for polarity classification of patients' experiences. 6-19 - Jianxu Zhu, Ran Liu, Zhibin Jiang, Peilian Wang, Yang Yao, Zan Shen:
Optimization of drug regimen in chemotherapy based on semi-mechanistic model for myelosuppression. 20-27 - Robert Leaman, Ritu Khare, Zhiyong Lu:
Challenges in clinical natural language processing for automated disorder normalization. 28-37 - Yan Wen, Jingcan Hao, Xiong Guo, Xiao Xiao, Cuiyan Wu, Sen Wang, Tielin Yang, Hui Shen, Xiangding Chen, Lijun Tan, Qing Tian, Hong-Wen Deng
, Feng Zhang
:
SWGDT: A sliding window-based genotype dependence testing tool for genome-wide susceptibility gene scan. 38-41 - Claire L. Gordon
, Chunhua Weng
:
Combining expert knowledge and knowledge automatically acquired from electronic data sources for continued ontology evaluation and improvement. 42-52 - Patricia Flatley Brennan, Kevin Ponto, Gail R. Casper, Ross Tredinnick, Markus Broecker:
Virtualizing living and working spaces: Proof of concept for a biomedical space-replication methodology. 53-61 - Patrick Aboagye-Sarfo, Qun Mai, Frank M. Sanfilippo
, David B. Preen
, Louise M. Stewart
, Daniel M. Fatovich
:
A comparison of multivariate and univariate time series approaches to modelling and forecasting emergency department demand in Western Australia. 62-73 - Anja Bethge, Udo Schumacher, Gero Wedemann
:
Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy. 74-87 - Vojtech Huser
, Chandan Sastry, Matthew Breymaier, Asma Idriss, James J. Cimino:
Standardizing data exchange for clinical research protocols and case report forms: An assessment of the suitability of the Clinical Data Interchange Standards Consortium (CDISC) Operational Data Model (ODM). 88-99 - Libera Fresiello
, Gianfranco Ferrari, Arianna Di Molfetta, Krzysztof Zielinski
, Alexandros T. Tzallas
, Steven Jacobs
, Marek Darowski, Maciej Kozarski
, Bart Meyns, Nikolaos S. Katertsidis, E. C. Karvounis
, Markos G. Tsipouras
, Maria Giovanna Trivella
:
A cardiovascular simulator tailored for training and clinical uses. 100-112 - Aqueasha M. Martin, Tamirat Abegaz, Juan E. Gilbert
:
Designing an over-the-counter consumer decision-making tool for older adults. 113-123 - Qi Li
, Eric S. Kirkendall, Eric S. Hall, Yizhao Ni, Todd Lingren
, Megan Kaiser, Nataline Lingren, Haijun Zhai, Imre Solti, Kristin Melton:
Automated detection of medication administration errors in neonatal intensive care. 124-133 - Wu Zheng, Catherine Blake
:
Using distant supervised learning to identify protein subcellular localizations from full-text scientific articles. 134-144 - Khaled El Emam, Hanna Farah, Saeed Samet
, Aleksander Essex, Elizabeth Jonker, Murat Kantarcioglu, Craig Earle:
A privacy preserving protocol for tracking participants in phase I clinical trials. 145-162
- Beatriz Pontes, Raúl Giráldez
, Jesús S. Aguilar-Ruiz
:
Biclustering on expression data: A review. 163-180
- Fatemeh Kargarfard, Ashkan Sami
, Esmaeil Ebrahimie
:
Knowledge discovery and sequence-based prediction of pandemic influenza using an integrated classification and association rule mining (CBA) algorithm. 181-188 - Hai Huang, Shaohong Zhang, Wen-Jun Shen, Hau-San Wong
, Dongqing Xie:
Gene set enrichment ensemble using fold change data only. 189-203 - Leyla Jael García Castro
, Rafael Berlanga Llavori
, Alexander García Castro:
In the pursuit of a semantic similarity metric based on UMLS annotations for articles in PubMed Central Open Access. 204-218 - Benjamin Alan Goldstein, Tara I. Chang, Wolfgang C. Winkelmayer:
Classifying individuals based on a densely captured sequence of vital signs: An example using repeated blood pressure measurements during hemodialysis treatment. 219-224 - Lukasz Czekierda, Filip Malawski, Przemyslaw Wyszkowski
:
Holistic approach to design and implementation of a medical teleconsultation workspace. 225-244 - Kamran Munir, Khawar Hasham, Richard McClatchey
:
Development of a large-scale neuroimages and clinical variables data atlas in the neuGRID4You (N4U) project. 245-262
- Elizabeth V. Eikey
, Madhu C. Reddy, Craig E. Kuziemsky:
Examining the role of collaboration in studies of health information technologies in biomedical informatics: A systematic review of 25 years of research. 263-277
- Duo Helen Wei, Huanying Helen Gu, Yehoshua Perl, Michael Halper, Christopher Ochs, Gai Elhanan, Yan Chen:
Structural measures to track the evolution of SNOMED CT hierarchies. 278-287 - Timothy Jay Carney, Geoffrey P. Morgan, Josette Jones, Anna M. McDaniel, Michael T. Weaver
, Bryan J. Weiner
, David A. Haggstrom:
Hypothesis generation using network structures on community health center cancer-screening performance. 288-307 - Saurav Mallik
, Ujjwal Maulik
:
MiRNA-TF-gene network analysis through ranking of biomolecules for multi-informative uterine leiomyoma dataset. 308-319 - Min Song
, Won Chul Kim
, Dahee Lee, Go Eun Heo, Keun Young Kang:
PKDE4J: Entity and relation extraction for public knowledge discovery. 320-332 - Aron Henriksson, Maria Kvist, Hercules Dalianis, Martin Duneld:
Identifying adverse drug event information in clinical notes with distributional semantic representations of context. 333-349 - W. Scott Campbell, Jay Pedersen, James C. McClay, Praveen Rao, Dhundy Bastola, James R. Campbell:
An alternative database approach for management of SNOMED CT and improved patient data queries. 350-357 - Chao Li
, Cen Shi, Huan Zhang, Yazhu Chen, Su Zhang:
Multiple instance learning for computer aided detection and diagnosis of gastric cancer with dual-energy CT imaging. 358-368 - Simone Marini
, Emanuele Trifoglio, Nicola Barbarini, Francesco Sambo, Barbara Di Camillo, Alberto Malovini
, Marco Manfrini
, Claudio Cobelli, Riccardo Bellazzi
:
A Dynamic Bayesian Network model for long-term simulation of clinical complications in type 1 diabetes. 369-376 - Keith Feldman
, Darcy A. Davis
, Nitesh V. Chawla
:
Scaling and contextualizing personalized healthcare: A case study of disease prediction algorithm integration. 377-385 - Mustafa Ozkaynak, Oliwier Dziadkowiec, Rakesh Mistry, Tiffany Callahan
, Ze He, Sara J. Deakyne Davies, Eric Tham:
Characterizing workflow for pediatric asthma patients in emergency departments using electronic health records. 386-398 - Wenya Yu, Meina Li, Yang Ge, Ling Li, Yi Zhang, Yuan Liu, Lulu Zhang:
Transformation of potential medical demand in China: A system dynamics simulation model. 399-414 - Alicia Martinez-García
, J. A. García-García
, María José Escalona Cuaresma
, Carlos Luis Parra Calderón:
Working with the HL7 metamodel in a Model Driven Engineering context. 415-424 - Rainer Winnenburg
, Alfred Sorbello, Anna Ripple, Rave Harpaz, Joseph M. Tonning
, Ana Szarfman
, Henry Francis, Olivier Bodenreider:
Leveraging MEDLINE indexing for pharmacovigilance - Inherent limitations and mitigation strategies. 425-435 - Duy Duc An Bui, Siddhartha Jonnalagadda, Guilherme Del Fiol
:
Automatically finding relevant citations for clinical guideline development. 436-445 - Hong Zhou, Howard S. Burkom
, Carla A. Winston, Achintya Dey, Umed Ajani:
Practical comparison of aberration detection algorithms for biosurveillance systems. 446-455 - Leslie D. McIntosh
, Mukesh K. Sharma, David Mulvihill, Snehil Gupta, Anthony Juehne, Bijoy George, Suhas Khot
, Atul Kaushal, Mark A. Watson, Rakesh Nagarajan:
caTissue Suite to OpenSpecimen: Developing an extensible, open source, web-based biobanking management system. 456-464
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