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ORCIDVladimir Brusic
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2020 – today
- 2023
[j42]Wenshuo Wang, Xu Li, Xiuqin Qiu, Xiang Zhang, Jindong Zhao
, Vladimir Brusic:
A privacy preserving framework for federated learning in smart healthcare systems. Inf. Process. Manag. 60(1): 103167 (2023)- 2022
- [j41]Shuyu Li, Sherif Welsen, Vladimir Brusic:
Multi-AP and Test Point Accuracy of the Results in WiFi Indoor Localization. Sensors 22(10): 3709 (2022) - [c45]Xiang Zhang, Matthew Pike, Nasser Mustafa, Vladimir Brusic:
Ethically Informed Software Process for Smart Health Home. CBMS 2022: 187-192 - [c44]Stuart McDonald, Dave Towey, Vladimir Brusic:
Social Impact of Smart Environments: Software Engineering Perspectives and Challenges. COMPSAC 2022: 1592-1597 - [c43]Kun Shang, Stuart McDonald, Giampaolo Buticchi, Vladimir Brusic:
The development of ethically informed standards for intelligent monitoring systems of electric machines. COMPSAC 2022: 1598-1605 - 2021
- [j40]Guanglan Zhang, Lou Chitkushev, Lars Rønn Olsen, Derin B. Keskin, Vladimir Brusic:
TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes. BMC Bioinform. 22-S(8): 40 (2021) - [c42]Xin Lin, Minjie Lyu, Yihan Zhang, Derin B. Keskin, Lubomir T. Chitkushev, Guanglan Zhang, Vladimir Brusic:
Correctness of Cell Labels in Public Single Cell Transcriptomics Datasets. BIBM 2021: 3280-3284 - [c41]Minjie Lyu, Yihan Zhang, Luning Yang, Xin Lin, Yilin Li, Huan Jin, Anthony Graham Bellotti, Nenad Mitic, Vladimir Brusic:
PBMC Cell Classification from Single Cell mRNA Expression by Artificial Neural Networks, Profiles, Gene Markers, and Protein Markers. BIBM 2021: 3285-3290 - [c40]Aleksandar Veljkovic, Mirjana Maljkovic, Nenad Mitic, Sasa N. Malkov, Minjie Lyu, Xin Lin, Marek T. Michalewicz, Guanglan Zhang, Vladimir Brusic:
Classification of Single Cell Types using Small Sets of Expressed Genes: Comparative Analysis of Supervised Machine Learning Methods. BIBM 2021: 3322-3326 - [c39]Luning Yang, Yihan Zhang, Nenad Mitic, Derin B. Keskin, Guanglan Zhang, Lubomir T. Chitkushev, Richard Rankin, Vladimir Brusic:
Applications of single cell profiles of PBMC: Improvements of cell type classification. BIBM 2021: 3334-3340 - [c38]Shuyu Li, Sherif Welsen, Vladimir Brusic:
Multi-Step Optimization of Indoor Localization Accuracy Using Commodity WiFi. PIMRC 2021: 1267-1272 - 2020
- [c37]Xin Lin, Jiahui Zhong, Minjie Lyu, Sen Lin, Derin B. Keskin, Guanglan Zhang, Vladimir Brusic, Lou Chitkushev:
Artificial Neural Network System for Cell Classification using Single Cell RNA Expression. BIBM 2020: 1253-1257 - [c36]Minjie Lyu, Milena Radenkovic, Derin B. Keskin, Vladimir Brusic:
Classification of Single Cell Types During Leukemia Therapy using Artificial Neural Networks. BIBM 2020: 1258-1261 - [c35]Luning Yang, Yihan Zhang, Nenad Mitic, Derin B. Keskin, Guanglan Zhang, Lou Chitkushev, Vladimir Brusic:
Single-cell mRNA Profiles in PBMC. BIBM 2020: 1318-1323 - [c34]Luning Yang, Yihan Zhang, Nenad Mitic, Derin B. Keskin, Guanglan Zhang, Lou Chitkushev, Vladimir Brusic:
Prediction of PBMC Cell Types Using scRNAseq Reference Profiles. BIBM 2020: 1324-1328 - [c33]Yihan Zhang, Luning Yang, Vladimir Brusic:
Automation of Gene Expression Profile Analysis in Single Cell Data. BIBM 2020: 1329-1334 - [c32]Bangrui Zheng, Minjie Lyu, Sen Lin, Vladimir Brusic:
Tissue of origin classification from single cell mRNA expression by Artificial Neural Networks. BIBM 2020: 1346-1350 - [c31]Jiahui Zhong, Razin Abdulrauf Shaikh, Haoguo Wu, Xin Lin, Zhiwei Cao, Lou Chitkushev, Guanglan Zhang, Derin B. Keskin, Vladimir Brusic:
Classification of PBMC cell types using scRNAseq, ANN, and incremental learning. BIBM 2020: 1351-1355 - [c30]Kun Shang, Michael Galea, Vladimir Brusic, Serhiy Korposh, Yaping Zhang:
Polyimide-Coated Fibre Bragg Grating (FBG) Sensors for Thermal Mapping of Electric Machine Windings. ICTON 2020: 1-4
2010 – 2019
- 2019
- [c29]Razin Abdulrauf Shaikh, Jiahui Zhong, Minjie Lyu, Sen Lin, Derin B. Keskin, Guanglan Zhang, Lou Chitkushev, Vladimir Brusic:
Classification of Five Cell Types from PBMC Samples using Single Cell Transcriptomics and Artificial Neural Networks. BIBM 2019: 2207-2213 - [c28]Guanglan Zhang, Lou Chitkushev, Derin B. Keskin, Vladimir Brusic:
TANTIGEN 2.0: an online database and analysis platform for tumor T cell antigens. BIBM 2019: 2228-2231 - [c27]Matthew Pike, Nasser Mustafa, Dave Towey, Vladimir Brusic:
Sensor Networks and Data Management in Healthcare: Emerging Technologies and New Challenges. COMPSAC (1) 2019: 834-839 - 2018
- [j39]Ping Zhang, Constantinos A. Georgiou, Vladimir Brusic:
Elemental metabolomics. Briefings Bioinform. 19(3): 524-536 (2018) - [c26]Jingjie Xu, Razin Abdulrauf Shaikh, Vladimir Brusic:
Single Cell Transcriptomics Reveals Summary Patterns Specific for PBMCs and Other Cell Types. BIBM 2018: 1435-1438 - 2017
- [c25]Jon B. Long, Yingyuan Zhang, Vladimir Brusic, Lou Chitkushev, Guanglan Zhang:
Antidote Application: An Educational System for Treatment of Common Toxin Overdose. BCB 2017: 442-448 - [c24]Guanglan Zhang, Derin B. Keskin, James A. DeCaprio, Catherine J. Wu, Lou Chitkushev, Vladimir Brusic:
MCVdb: A database for knowledge discovery in Merkel cell polyomavirus with applications in T cell immunology and vaccinology. BIBM 2017: 1483-1488 - 2015
- [j38]Luke Vandewater, Vladimir Brusic, William J. Wilson, Lance S. Macaulay, Ping Zhang:
An adaptive genetic algorithm for selection of blood-based biomarkers for prediction of Alzheimer's disease progression. BMC Bioinform. 16(S18): S1 (2015) - 2014
- [j37]Guanglan Zhang, Angelika Riemer, Derin B. Keskin, Lou Chitkushev, Ellis L. Reinherz, Vladimir Brusic:
HPVdb: a data mining system for knowledge discovery in human papillomavirus with applications in T cell immunology and vaccinology. Database J. Biol. Databases Curation 2014 (2014) - [c23]Jon Long, Yingyuan Zhang, Lubomir T. Chitkushev, Vladimir Brusic, Guanglan Zhang:
Antidote application: an educational system for treatment of common toxin overdose. BCB 2014: 598-599 - 2013
- [j36]Yongqun He, Zhiwei Cao, Anne S. De Groot, Vladimir Brusic, Christian Schönbach, Nikolai Petrovsky:
Computational vaccinology and the ICoVax 2012 workshop. BMC Bioinform. 14(S-4): I1 (2013) - [c22]Ping Zhang, Lou Chitkushev, Vladimir Brusic, Guanglan Zhang:
Biomarkers in Immunology: from Concepts to Applications. BCB 2013: 826 - [c21]Jing Sun, Guanglan Zhang, Lars Rønn Olsen, Ellis L. Reinherz, Vladimir Brusic:
Landscape of neutralizing assessment of monoclonal antibodies against dengue virus. BCB 2013: 836 - [c20]Guanglan Zhang, Angelika Riemer, Derin B. Keskin, Lou Chitkushev, Ellis L. Reinherz, Vladimir Brusic:
HPVdb: a Data Mining System for Knowledge Discovery in Human Papillomavirus with Applications in T cell Immunology and Vaccinology. BCB 2013: 843 - 2012
- [j35]Christian Schönbach, Sissades Tongsima, Jonathan H. Chan, Vladimir Brusic, Tin Wee Tan, Shoba Ranganathan:
InCoB2012 Conference: from biological data to knowledge to technological breakthroughs. BMC Bioinform. 13(S-17): S1 (2012) - [j34]Francesco Pappalardo, Vladimir Brusic, Holger Fröhlich:
Immune System Modeling and Related Pathologies. Comput. Math. Methods Medicine 2012: 274702:1-274702:2 (2012) - 2011
- [j33]David S. DeLuca, Derin B. Keskin, Guang Zhang, Ellis L. Reinherz, Vladimir Brusic:
PB1-F2 Finder: scanning influenza sequences for PB1-F2 encoding RNA segments. BMC Bioinform. 12(S-13): S6 (2011) - [c19]Guanglan Zhang, Melisa L. Budde, Jennifer J. Lhost, David H. O'Connor, William H. Hildebrand, Vladimir Brusic:
PREDmafa: a system for prediction of peptide binding to several MHC class I molecules in cynomolgus macaques. BCB 2011: 602-606 - [c18]Guanglan Zhang, Ellis L. Reinherz, Derin B. Keskin, Vladimir Brusic:
A cDNA microarray for rapid and economical identification of HLA profiles of individuals. BIBM Workshops 2011: 677-679 - [c17]Esma Dilek, Tanya Zlateva, Guanglan Zhang, Lubomir T. Chitkushev, Jae Young Lee, Vladimir Brusic:
Probe design optimization of HLA microarray: Data cleaning of probe signals from cDNA tiling microarray: Outlier detection, noise reduction, and identification of uninformative probes in HLA typing application. BIBM Workshops 2011: 680-682 - [c16]Suresh Kalathur, Vladimir Brusic, Guanglan Zhang, Lubomir T. Chitkushev, Tanya Zlateva:
Visualization tools for presenting and analysis of global landscapes of vaccine targets. BIBM Workshops 2011: 683-688 - 2010
- [j32]Liwen You, Vladimir Brusic, Marcus Gallagher, Mikael Bodén:
Using Gaussian Process with Test Rejection to Detect T-Cell Epitopes in Pathogen Genomes. IEEE ACM Trans. Comput. Biol. Bioinform. 7(4): 741-751 (2010)
2000 – 2009
- 2009
- [j31]Francesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew P. J. Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pierluigi Lollini, Kaye E. Basford, Vladimir Brusic:
ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. Briefings Bioinform. 10(3): 330-340 (2009) - [c15]Francesco Pappalardo, Mark D. Halling-Brown, Marzio Pennisi, Ferdinando Chiacchio, Clare Sansom, Adrian J. Shepherd, David S. Moss, Santo Motta, Vladimir Brusic:
The ImmunoGrid Simulator: How to Use It. CIBB 2009: 1-19 - 2008
- [j30]Vladimir Brusic, Shoba Ranganathan:
Critical technologies for bioinformatics. Briefings Bioinform. 9(4): 261-262 (2008) - [j29]Olivo Miotto, A. T. Heiny, Tin Wee Tan, J. Thomas August, Vladimir Brusic:
Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis. BMC Bioinform. 9(S-1) (2008) - [j28]Olivo Miotto, Tin Wee Tan, Vladimir Brusic:
Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses. BMC Bioinform. 9(S-1) (2008) - [j27]Guanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, A. T. Heiny, Kenneth X. Lee, Chee Keong Kwoh, J. Thomas August, Vladimir Brusic:
Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen proteomes. BMC Bioinform. 9(S-1) (2008) - [j26]Honghuang Lin, Guanglan Zhang, Songsak Tongchusak, Ellis L. Reinherz, Vladimir Brusic:
Evaluation of MHC-II peptide binding prediction servers: applications for vaccine research. BMC Bioinform. 9(S-12) (2008) - [c14]Ping Zhang, Vladimir Brusic, Kaye E. Basford:
A Hybrid Model for Prediction of Peptide Binding to MHC Molecules. ICONIP (1) 2008: 529-536 - 2007
- [j25]Vladimir Brusic:
The growth of bioinformatics. Briefings Bioinform. 8(2): 69-70 (2007) - [j24]Menaka Rajapakse, Bertil Schmidt, Feng Lin, Vladimir Brusic:
Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms. BMC Bioinform. 8 (2007) - [c13]Liwen You, Ping Zhang, Mikael Bodén, Vladimir Brusic:
Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope Identification. PRIB 2007: 337-348 - 2006
- [j23]Joo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan:
Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides. Bioinform. 22(10): 1232-1238 (2006) - [j22]Asif M. Khan, A. T. Heiny, Kenneth X. Lee, Kellathur N. Srinivasan, Tin Wee Tan, J. Thomas August, Vladimir Brusic:
Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus. BMC Bioinform. 7(S-5) (2006) - [c12]Menaka Rajapakse, Bertil Schmidt, Vladimir Brusic:
Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs. EvoWorkshops 2006: 149-158 - [c11]Seng Hong Seah, Chee Keong Kwoh, Vladimir Brusic, Meena Kishore Sakharkar, Geok See Ng:
Functional Prediction of Snake Neurotoxins. ICARCV 2006: 1-4 - [c10]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Guanglan Zhang, Vladimir Brusic:
Extreme Learning Machine for Predicting HLA-Peptide Binding. ISNN (2) 2006: 716-721 - [c9]Kai-Tak Lam, Judice L. Y. Koh, Bharadwaj Veeravalli, Vladimir Brusic:
Incremental Maintenance of Biological Databases Using Association Rule Mining. PRIB 2006: 140-150 - 2005
- [j21]Guanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic:
Neural Models for Predicting Viral Vaccine Targets. J. Bioinform. Comput. Biol. 3(5): 1207-1226 (2005) - [j20]Guanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic:
MULTIPRED: a computational system for prediction of promiscuous HLA binding peptides. Nucleic Acids Res. 33(Web-Server-Issue): 172-179 (2005) - [j19]Guanglan Zhang, Kellathur N. Srinivasan, Anitha Veeramani, J. Thomas August, Vladimir Brusic:
PREDBALB/c: a system for the prediction of peptide binding to H2d molecules, a haplotype of the BALB/c mouse. Nucleic Acids Res. 33(Web-Server-Issue): 180-183 (2005) - [c8]Ivana Bozic, Guanglan Zhang, Vladimir Brusic:
Predictive Vaccinology: Optimisation of Predictions Using Support Vector Machine Classifiers. IDEAL 2005: 375-381 - [c7]Olivo Miotto, Tin Wee Tan, Vladimir Brusic:
Extraction by Example: Induction of Structural Rules for the Analysis of Molecular Sequence Data from Heterogeneous Sources. IDEAL 2005: 398-405 - [c6]Menaka Rajapakse, Lonce L. Wyse, Bertil Schmidt, Vladimir Brusic:
Deriving Matrix of Peptide-MHC Interactions in Diabetic Mouse by Genetic Algorithm. IDEAL 2005: 440-447 - 2004
- [j18]Joyce Phui Yee Siew, Asif M. Khan, Paul T. J. Tan, Judice L. Y. Koh, Seng Hong Seah, Chuay Yeng Koo, Siaw Ching Chai, Arunmozhiarasi Armugam, Vladimir Brusic, Kandiah Jeyaseelan:
Systematic analysis of snake neurotoxins' functional classification using a data warehousing approach. Bioinform. 20(18): 3466-3480 (2004) - [j17]Manisha Brahmachary, S. P. T. Krishnan, Judice L. Y. Koh, Asif M. Khan, Seng Hong Seah, Tin Wee Tan, Vladimir Brusic, Vladimir B. Bajic:
ANTIMIC: a database of antimicrobial sequences. Nucleic Acids Res. 32(Database-Issue): 586-589 (2004) - [j16]Johann Lenffer, Paulo Lai, Wafaa El Mejaber, Asif M. Khan, Judice L. Y. Koh, Paul T. J. Tan, Seng Hong Seah, Vladimir Brusic:
CysView: protein classification based on cysteine pairing patterns. Nucleic Acids Res. 32(Web-Server-Issue): 350-355 (2004) - [c5]Kellathur N. Srinivasan, Guanglan Zhang, Asif M. Khan, J. Thomas August, Vladimir Brusic:
Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens. ISMB/ECCB (Supplement of Bioinformatics) 2004: 297-302 - 2003
- [j15]Paul T. J. Tan, Asif M. Khan, Vladimir Brusic:
Bioinformatics for Venom and Toxin Sciences. Briefings Bioinform. 4(1): 53-62 (2003) - [j14]Nikolai Petrovsky, Christian Schönbach, Vladimir Brusic:
Bioinformatic strategies for better understanding of immune function. Silico Biol. 3(4): 411-416 (2003) - [j13]Vladimir Brusic:
From Immunoinformatics to Immunomics. J. Bioinform. Comput. Biol. 1(1): 179-182 (2003) - [c4]Vladimir B. Bajic, Vladimir Brusic, Jinyan Li, See-Kiong Ng, Limsoon Wong:
From Informatics to Bioinformatics. APBC 2003: 3-12 - 2002
- [j12]Vladimir B. Bajic, Seng Hong Seah, Allen Chong, Guanglan Zhang, Judice L. Y. Koh, Vladimir Brusic:
Dragon Promoter Finder: recognition of vertebrate RNA polymerase II promoters. Bioinform. 18(1): 198-199 (2002) - [j11]Vladimir B. Bajic, Allen Chong, Seng Hong Seah, Vladimir Brusic:
An Intelligent System for Vertebrate Promoter Recognition. IEEE Intell. Syst. 17(4): 64-70 (2002) - [j10]Vladimir B. Bajic, Suisheng Tang, Hao Han, Vladimir Brusic, Artemis G. Hatzigeorgiou:
Artificial Neural Networks Based Systems for Recognition of Genomic Signals and Regions: A Review. Informatica (Slovenia) 26(4) (2002) - [j9]Christian Schönbach, Judice L. Y. Koh, Darren R. Flower, Limsoon Wong, Vladimir Brusic:
FIMM, a database of functional molecular immunology: update 2002. Nucleic Acids Res. 30(1): 226-229 (2002) - 2000
- [j8]Christian Schönbach, Peter Kowalski-Saunders, Vladimir Brusic:
Data Warehousing in Molecular Biology. Briefings Bioinform. 1(1): 190-198 (2000) - [j7]Christian Schönbach, Judice L. Y. Koh, Xin Sheng, Limsoon Wong, Vladimir Brusic:
FIMM, a database of functional molecular immunology. Nucleic Acids Res. 28(1): 222-224 (2000)
1990 – 1999
- 1999
- [j6]Vladimir Brusic, John Zeleznikow:
Knowledge discovery and data mining in biological databases. Knowl. Eng. Rev. 14(3): 257-277 (1999) - [c3]Vladimir Brusic, John Zeleznikow:
Artificial neural network applications in immunology. IJCNN 1999: 3685-3689 - 1998
- [j5]Vladimir Brusic, George B. Rudy, G. Honeyman, Jürgen Hammer, Leonard C. Harrison:
Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network. Bioinform. 14(2): 121-130 (1998) - [j4]Vladimir Brusic, Peter van Endert, John Zeleznikow, Soizic Daniel, Jürgen Hammer, Nikolai Petrovsky:
A neural network model approach to the study of human TAP transporter. Silico Biol. 1(2): 109-121 (1998) - [j3]Vladimir Brusic, George B. Rudy, Leonard C. Harrison:
MHCPEP, a database of MHC-binding peptides: update 1997. Nucleic Acids Res. 26(1): 368-371 (1998) - [c2]Lawrence S. Hon, Neil F. Abernethy, Vladimir Brusic, Jenny Chai, Russ B. Altman:
MHCWeb: converting a WWW database into a knowledge-based collaborative environment. AMIA 1998 - 1997
- [j2]Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison:
MHCPEP, a database of MHC-binding peptides: update 1996. Nucleic Acids Res. 25(1): 269-271 (1997) - [c1]Vladimir Brusic, Christian Schönbach, Masafumi Takiguchi, Victor Ciesielski, Leonard C. Harrison:
Application of Genetic Search in Derivation of Matrix Models of Peptide Binding to MHC Molecules. ISMB 1997: 75-83 - 1996
- [j1]Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison:
MHCPEP--a database of MHC-binding peptides: update 1995. Nucleic Acids Res. 24(1): 242-244 (1996)
Coauthor Index
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