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2020 – today
- 2024
[j22]Lanya T. Cai
, Joseph Y. Moon, Paul B. Camacho, Aaron T. Anderson, Won Jong Chwa, Bradley P. Sutton, Amy J. Markowitz, Eva M. Palacios, Alexis A. Rodriguez, Geoffrey T. Manley, Shivsundaram Shankar, Peer-Timo Bremer, Pratik Mukherjee, Ravi K. Madduri, Shankar Gopinath, Ramesh Grandhi, C. Dirk Keene, Michael A. McCrea, Randall Merchant, Laura B. Ngwenya, Ava M. Puccio, David Schnyer, Sabrina R. Taylor, John K. Yue, Esther L. Yuh, Ross Zafonte:
MaPPeRTrac: A Massively Parallel, Portable, and Reproducible Tractography Pipeline. Neuroinformatics 22(2): 177-191 (2024)- [c31]Zilinghan Li, Pranshu Chaturvedi, Shilan He, Han Chen, Gagandeep Singh, Volodymyr V. Kindratenko, Eliu A. Huerta, Kibaek Kim, Ravi K. Madduri:
FedCompass: Efficient Cross-Silo Federated Learning on Heterogeneous Client Devices Using a Computing Power-Aware Scheduler. ICLR 2024 - [i10]Zilinghan Li, Shilan He, Pranshu Chaturvedi, Volodymyr V. Kindratenko, Eliu A. Huerta, Kibaek Kim, Ravi K. Madduri:
Secure Federated Learning Across Heterogeneous Cloud and High-Performance Computing Resources - A Case Study on Federated Fine-tuning of LLaMA 2. CoRR abs/2402.12271 (2024) - [i9]Zilinghan Li, Shilan He, Ze Yang, Minseok Ryu, Kibaek Kim, Ravi K. Madduri:
Advances in APPFL: A Comprehensive and Extensible Federated Learning Framework. CoRR abs/2409.11585 (2024) - [i8]Ravi K. Madduri, Zilinghan Li, Tarak Nandi, Kibaek Kim, Minseok Ryu, Alex Rodriguez:
Advances in Privacy Preserving Federated Learning to Realize a Truly Learning Healthcare System. CoRR abs/2409.19756 (2024) - 2023
- [c30]Zilinghan Li, Shilan He, Pranshu Chaturvedi, Trung-Hieu Hoang, Minseok Ryu, Eliu A. Huerta, Volodymyr V. Kindratenko, Jordan D. Fuhrman, Maryellen L. Giger, Ryan Chard, Kibaek Kim, Ravi K. Madduri:
APPFLx: Providing Privacy-Preserving Cross-Silo Federated Learning as a Service. e-Science 2023: 1-4 - [i7]Zilinghan Li, Shilan He, Pranshu Chaturvedi, Trung-Hieu Hoang, Minseok Ryu, Eliu A. Huerta, Volodymyr V. Kindratenko, Jordan D. Fuhrman, Maryellen L. Giger, Ryan Chard, Kibaek Kim, Ravi K. Madduri:
APPFLx: Providing Privacy-Preserving Cross-Silo Federated Learning as a Service. CoRR abs/2308.08786 (2023) - [i6]Zilinghan Li, Pranshu Chaturvedi, Shilan He, Han Chen, Gagandeep Singh, Volodymyr V. Kindratenko, Eliu A. Huerta, Kibaek Kim, Ravi K. Madduri:
FedCompass: Efficient Cross-Silo Federated Learning on Heterogeneous Client Devices using a Computing Power Aware Scheduler. CoRR abs/2309.14675 (2023) - [i5]Trung-Hieu Hoang, Jordan D. Fuhrman, Ravi K. Madduri, Miao Li, Pranshu Chaturvedi, Zilinghan Li, Kibaek Kim, Minseok Ryu, Ryan Chard, Eliu A. Huerta, Maryellen L. Giger:
Enabling End-to-End Secure Federated Learning in Biomedical Research on Heterogeneous Computing Environments with APPFLx. CoRR abs/2312.08701 (2023) - 2022
- [j21]Joseph Y. Moon, Pratik Mukherjee, Ravi K. Madduri, Amy J. Markowitz, Lanya T. Cai, Eva M. Palacios, Geoffrey T. Manley, Peer-Timo Bremer:
The Case for Optimized Edge-Centric Tractography at Scale. Frontiers Neuroinformatics 16: 752471 (2022) - [c29]Minseok Ryu, Youngdae Kim, Kibaek Kim, Ravi K. Madduri:
APPFL: Open-Source Software Framework for Privacy-Preserving Federated Learning. IPDPS Workshops 2022: 1074-1083 - [i4]Minseok Ryu, Youngdae Kim, Kibaek Kim, Ravi K. Madduri:
APPFL: Open-Source Software Framework for Privacy-Preserving Federated Learning. CoRR abs/2202.03672 (2022) - [i3]Eliu A. Huerta, Ben Blaiszik, L. Catherine Brinson, Kristofer E. Bouchard, Daniel Diaz, Caterina Doglioni, Javier M. Duarte, Murali Emani, Ian T. Foster, Geoffrey C. Fox, Philip C. Harris, Lukas Heinrich, Shantenu Jha, Daniel S. Katz, Volodymyr V. Kindratenko, Christine R. Kirkpatrick, Kati Lassila-Perini, Ravi K. Madduri, Mark S. Neubauer, Fotis E. Psomopoulos, Avik Roy, Oliver Rübel, Zhizhen Zhao, Ruike Zhu:
FAIR for AI: An interdisciplinary, international, inclusive, and diverse community building perspective. CoRR abs/2210.08973 (2022) - 2020
- [j20]Raffaele Montella, Alison Brizius, Diana Di Luccio, Cheryl H. Porter, Joshua Elliott, Ravi K. Madduri, David Kelly, Angelo Riccio, Ian T. Foster:
Using the FACE-IT portal and workflow engine for operational food quality prediction and assessment: An application to mussel farms monitoring in the Bay of Napoli, Italy. Future Gener. Comput. Syst. 110: 453-467 (2020)
2010 – 2019
- 2019
- [i2]Mike D'Arcy, Kyle Chard, Ian T. Foster, Carl Kesselman, Ravi K. Madduri, Nickolaus D. Saint, Rick Wagner:
Big Data Bags: A Scalable Packaging Format for Science. RO 2019 - 2018
- [j19]Ryan Chard, Ravi K. Madduri, Nicholas T. Karonis, Kyle Chard, Kirk L. Duffin, Caesar E. Ordoñez, Thomas D. Uram, Justin Fleischauer, Ian T. Foster, Michael E. Papka, John Winans:
Scalable pCT Image Reconstruction Delivered as a Cloud Service. IEEE Trans. Cloud Comput. 6(1): 182-195 (2018) - [i1]Ravi K. Madduri, Kyle Chard, Michel D'Arcy, Segun Jung, Alexis A. Rodriguez, Dinanath Sulakhe, Eric Deutsch, Cory C. Funk, Benjamin D. Heavner, Matthew A. Richards, Paul Shannon, Gustavo Glusman, Nathan D. Price, Carl Kesselman, Ian T. Foster:
Reproducible big data science: A case study in continuous FAIRness. RO 2018 - 2017
- [j18]Ryan Chard, Kyle Chard, Rich Wolski, Ravi K. Madduri, Bryan C. K. Ng, Kris Bubendorfer, Ian T. Foster:
Cost-Aware Cloud Profiling, Prediction, and Provisioning as a Service. IEEE Cloud Comput. 4(4): 48-59 (2017) - [j17]Kathleen M. Jagodnik, Simon Koplev, Sherry L. Jenkins, Lucila Ohno-Machado, Benedict Paten, Stephan C. Schürer, Michel Dumontier, Ruben Verborgh, Alex Bui, Peipei Ping, Neil J. McKenna, Ravi K. Madduri, Ajay Pillai, Avi Ma'ayan:
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop. J. Biomed. Informatics 71: 49-57 (2017) - 2016
- [j16]Ravi K. Madduri, Ian T. Foster:
Science as a Service [Guest editors' introduction]. Comput. Sci. Eng. 18(5): 8-9 (2016) - [c28]Kyle Chard, Mike D'Arcy, Benjamin D. Heavner, Ian T. Foster, Carl Kesselman, Ravi K. Madduri, Alexis A. Rodriguez, Stian Soiland-Reyes, Carole A. Goble, Kristi Clark, Eric W. Deutsch, Ivo D. Dinov, Nathan D. Price, Arthur W. Toga:
I'll take that to go: Big data bags and minimal identifiers for exchange of large, complex datasets. IEEE BigData 2016: 319-328 - [c27]Ryan Chard, Kyle Chard, Bryan C. K. Ng, Kris Bubendorfer, Alex A. Rodriguez, Ravi K. Madduri, Ian T. Foster:
An Automated Tool Profiling Service for the Cloud. CCGrid 2016: 223-232 - [c26]Raffaele Montella, Alison Brizius, Diana Di Luccio, Cheryl H. Porter, Joshua Elliott, Ravi K. Madduri, David Kelly, Angelo Riccio, Ian T. Foster:
Applications of the FACE-IT Data Science Portal and Workflow Engine for Operational Food Quality Prediction and Assessment: Mussel Farm Monitoring in the Bay of Napoli, Italy. WORKS@SC 2016: 64-68 - 2015
- [j15]Vassily Trubetskoy, Alex A. Rodriguez, Uptal J. Dave, Nicholas Campbell, Emily L. Crawford, Edwin H. Cook Jr., James S. Sutcliffe, Ian T. Foster, Ravi K. Madduri, Nancy J. Cox, Lea K. Davis:
Consensus Genotyper for Exome Sequencing (CGES): improving the quality of exome variant genotypes. Bioinform. 31(2): 187-193 (2015) - [j14]Ravi K. Madduri, Kyle Chard, Ryan Chard, Lukasz Lacinski, Alex A. Rodriguez, Dinanath Sulakhe, David Kelly, Utpal J. Dave, Ian T. Foster:
The Globus Galaxies platform: delivering science gateways as a service. Concurr. Comput. Pract. Exp. 27(16): 4344-4360 (2015) - [j13]Raffaele Montella, David Kelly, Wei Xiong, Alison Brizius, Joshua Elliott, Ravi K. Madduri, Ketan Maheshwari, Cheryl H. Porter, Peter Vilter, Michael Wilde, Meng Zhang, Ian T. Foster:
FACE-IT: A science gateway for food security research. Concurr. Comput. Pract. Exp. 27(16): 4423-4436 (2015) - [j12]Ravi K. Madduri, Alex A. Rodriguez, Thomas D. Uram, Katrin Heitmann, Tanu Malik, Saba Sehrish, Ryan Chard, Shreyas Cholia, Marc F. Paterno, Jim Kowalkowski, Salman Habib:
PDACS: A Portal for Data Analysis Services for Cosmological Simulations. Comput. Sci. Eng. 17(5): 18-26 (2015) - [j11]Arthur W. Toga, Ian T. Foster, Carl Kesselman, Ravi K. Madduri, Kyle Chard, Eric W. Deutsch, Nathan D. Price, Gustavo Glusman, Benjamin D. Heavner, Ivo D. Dinov, Joseph Ames, John D. Van Horn, Roger Kramer, Leroy E. Hood:
Big biomedical data as the key resource for discovery science. J. Am. Medical Informatics Assoc. 22(6): 1126-1131 (2015) - [c25]Ryan Chard, Kyle Chard, Kris Bubendorfer, Lukasz Lacinski, Ravi K. Madduri, Ian T. Foster:
Cost-Aware Elastic Cloud Provisioning for Scientific Workloads. CLOUD 2015: 971-974 - [c24]Ryan Chard, Kyle Chard, Kris Bubendorfer, Lukasz Lacinski, Ravi K. Madduri, Ian T. Foster:
Cost-Aware Cloud Provisioning. e-Science 2015: 136-144 - 2014
- [j10]Ravi K. Madduri, Dinanath Sulakhe, Lukasz Lacinski, Bo Liu, Alex A. Rodriguez, Kyle Chard, Utpal J. Dave, Ian T. Foster:
Experiences building Globus Genomics: a next-generation sequencing analysis service using Galaxy, Globus, and Amazon Web Services. Concurr. Comput. Pract. Exp. 26(13): 2266-2279 (2014) - [j9]Bo Liu, Ravi K. Madduri, Borja Sotomayor, Kyle Chard, Lukasz Lacinski, Utpal J. Dave, Jianqiang Li, Chunchen Liu, Ian T. Foster:
Cloud-based bioinformatics workflow platform for large-scale next-generation sequencing analyses. J. Biomed. Informatics 49: 119-133 (2014) - [c23]Kyle Chard, Ravi K. Madduri, Xia Jiang, Farid Dahi, Michael W. Vannier, Ian T. Foster:
A cloud-based image analysis gateway for traumatic brain injury research. GCE@SC 2014: 13-16 - [c22]Ryan Chard, Saba Sehrish, Alex A. Rodriguez, Ravi K. Madduri, Thomas D. Uram, Marc F. Paterno, Katrin Heitmann, Shreyas Cholia, Jim Kowalkowski, Salman Habib:
PDACS: a portal for data analysis services for cosmological simulations. GCE@SC 2014: 30-33 - [c21]Raffaele Montella, Alison Brizius, Joshua Elliott, David Kelly, Ravi K. Madduri, Ketan Maheshwari, Cheryl H. Porter, Peter Vilter, Michael Wilde, Wei Xiong, Meng Zhang, Ian T. Foster:
FACE-IT: a science gateway for food security research. GCE@SC 2014: 42-46 - 2013
- [c20]Ketan Maheshwari, Alex A. Rodriguez, David Kelly, Ravi K. Madduri, Justin M. Wozniak, Michael Wilde, Ian T. Foster:
Enabling multi-task computation on Galaxy-based gateways using swift. CLUSTER 2013: 1-3 - [c19]Ian T. Foster, Ravi K. Madduri:
Science as a service: how on-demand computing can accelerate discovery. ScienceCloud@HPDC 2013: 1-2 - [c18]Dinanath Sulakhe, Alex A. Rodriguez, Nick Prozorovsky, Nilesh Kavthekar, Ravi K. Madduri, Amol Parikh, Paul Dave, Lukasz Lacinski, Ian T. Foster:
Distributed tools deployment and management for multiple galaxy instances in globus genomics. WORKS@SC 2013: 106-111 - [c17]Ravi K. Madduri, Paul Dave, Dinanath Sulakhe, Lukasz Lacinski, Bo Liu, Ian T. Foster:
Experiences in building a next-generation sequencing analysis service using galaxy, globus online and Amazon web service. XSEDE 2013: 34:1-34:3 - 2012
- [c16]Bo Liu, Borja Sotomayor, Ravi K. Madduri, Kyle Chard, Ian T. Foster:
Deploying Bioinformatics Workflows on Clouds with Galaxy and Globus Provision. SC Companion 2012: 1087-1095 - 2011
- [j8]Karl G. Helmer, José Luis Ambite, Joseph Ames, Rachana Ananthakrishnan, Gully Burns, Ann L. Chervenak, Ian T. Foster, Lee Liming, David B. Keator, Fabio Macciardi, Ravi K. Madduri, John-Paul Navarro, Steven G. Potkin, Bruce R. Rosen, Seth Ruffins, Robert Schuler, Jessica A. Turner, Arthur W. Toga, Christina Williams, Carl Kesselman:
Enabling collaborative research using the Biomedical Informatics Research Network (BIRN). J. Am. Medical Informatics Assoc. 18(4): 416-422 (2011) - [c15]Jia Zhang, Wei Tan, John Alexander, Ian T. Foster, Ravi K. Madduri:
Recommend-As-You-Go: A Novel Approach Supporting Services-Oriented Scientific Workflow Reuse. IEEE SCC 2011: 48-55 - [c14]Wei Tan, Jia Zhang, Ravi K. Madduri, Ian T. Foster, David De Roure:
Providing Map and GPS Assistance to Service Composition in Bioinformatics. IEEE SCC 2011: 608-615 - [c13]Wei Tan, Jia Zhang, Ravi K. Madduri, Ian T. Foster, David De Roure, Carole A. Goble:
ServiceMap: Providing Map and GPS Assistance to Service Composition in Bioinformatics. IEEE SCC 2011: 632-639 - [c12]Tanu Malik, Neil Best, Joshua Elliott, Ravi K. Madduri, Ian T. Foster:
Improving the efficiency of subset queries on raster images. GIS-HPDGIS 2011: 34-37 - [c11]Jia Zhang, Ravi K. Madduri, Wei Tan, Kevin Deichl, John Alexander, Ian T. Foster:
Toward Semantics Empowered Biomedical Web Services. ICWS 2011: 371-378 - 2010
- [j7]Wei Tan, Ravi K. Madduri, Aleksandra Nenadic, Stian Soiland-Reyes, Dinanath Sulakhe, Ian T. Foster, Carole A. Goble:
caGrid Workflow Toolkit: A Taverna based workflow tool for cancer Grid. BMC Bioinform. 11: 542 (2010) - [j6]Wei Tan, Paolo Missier, Ian T. Foster, Ravi K. Madduri, David De Roure, Carole A. Goble:
A comparison of using Taverna and BPEL in building scientific workflows: the case of caGrid. Concurr. Comput. Pract. Exp. 22(9): 1098-1117 (2010)
2000 – 2009
- 2009
- [c10]Wantao Liu, Rajkumar Kettimuthu, Brian Tieman, Ravi K. Madduri, Bo Li, Ian T. Foster:
GridFTP GUI: An Easy and Efficient Way to Transfer Data in Grid. GridNets 2009: 57-66 - [c9]Kyle Chard, Wei Tan, Joshua Boverhof, Ravi K. Madduri, Ian T. Foster:
Wrap Scientific Applications as WSRF Grid Services Using gRAVI. ICWS 2009: 83-90 - [c8]Wei Tan, Kyle Chard, Dinanath Sulakhe, Ravi K. Madduri, Ian T. Foster, Stian Soiland-Reyes, Carole A. Goble:
Scientific Workflows as Services in caGrid: A Taverna and gRAVI Approach. ICWS 2009: 413-420 - [c7]Wantao Liu, Rajkumar Kettimuthu, Ravi K. Madduri:
DataMover: A Lightweight, Extensible Data Movement Framework for Grid Environments. PDPTA 2009: 437-443 - 2008
- [j5]Joel H. Saltz, Tahsin M. Kurç, Shannon Hastings, Stephen Langella, Scott Oster, David Ervin, Ashish Sharma, Tony Pan, Metin N. Gurcan, Justin Permar, Renato Ferreira, Philip R. O. Payne, Ümit V. Çatalyürek, Enrico Caserta, Gustavo Leone, Michael C. Ostrowski, Ravi K. Madduri, Ian T. Foster, Subhasree Madhavan, Kenneth H. Buetow, Krishnakant Shanbhag, Eliot L. Siegel:
e-Science, caGrid, and Translational Biomedical Research. Computer 41(11): 58-66 (2008) - [j4]Wei Tan, Ian T. Foster, Ravi K. Madduri:
Combining the Power of Taverna and caGrid: Scientific Workflows that Enable Web-Scale Collaboration. IEEE Internet Comput. 12(6): 61-68 (2008) - [j3]Scott Oster, Stephen Langella, Shannon Hastings, David Ervin, Ravi K. Madduri, Joshua Phillips, Tahsin M. Kurç, Frank Siebenlist, Peter A. Covitz, Krishnakant Shanbhag, Ian T. Foster, Joel H. Saltz:
Model Formulation: caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical Research. J. Am. Medical Informatics Assoc. 15(2): 138-149 (2008) - [c6]Kyle Chard, Cem Onyuksel, Wei Tan, Dinanath Sulakhe, Ravi K. Madduri, Ian T. Foster:
Build Grid Enabled Scientific Workflows Using gRAVI and Taverna. eScience 2008: 614-619 - [c5]Joel H. Saltz, Shannon Hastings, Stephen Langella, Scott Oster, Tahsin M. Kurç, Philip R. O. Payne, Renato Ferreira, Beth Plale, Carole A. Goble, David Ervin, Ashish Sharma, Tony Pan, Justin Permar, Peter Brezany, Frank Siebenlist, Ravi K. Madduri, Ian T. Foster, Krishnakant Shanbhag, Charlie Mead, Neil P. Chue Hong:
A Roadmap for caGrid, an Enterprise Grid Architecture for Biomedical Research. HealthGrid 2008: 224-237 - [c4]Wei Tan, Paolo Missier, Ravi K. Madduri, Ian T. Foster:
Building Scientific Workflow with Taverna and BPEL: A Comparative Study in caGrid. ICSOC Workshops 2008: 118-129 - [c3]Wei Tan, Ravi K. Madduri, Kiran Keshav, Baris E. Suzek, Scott Oster, Ian T. Foster:
Orchestrating caGrid Services in Taverna. ICWS 2008: 14-20 - 2007
- [c2]Scott Oster, Stephen Langella, Shannon Hastings, David Ervin, Ravi K. Madduri, Tahsin M. Kurç, Frank Siebenlist, Peter A. Covitz, Krishnakant Shanbhag, Ian T. Foster, Joel H. Saltz:
caGrid 1.0: A Grid Enterprise Architecture for Cancer Research. AMIA 2007 - 2006
- [j2]Ian T. Foster, Veronika Nefedova, Mehran Ahsant, Rachana Ananthakrishnan, Lee Liming, Ravi K. Madduri, Olle Mulmo, Laura Pearlman, Frank Siebenlist:
Streamlining Grid Operations: Definition and Deployment of a Portal-based User Registration Service. J. Grid Comput. 4(2): 135-144 (2006) - 2004
- [j1]Gregor von Laszewski, Jarek Gawor, Pawel Plaszczak, Mihael Hategan, Kaizar Amin, Ravi K. Madduri, Scott Gose, S. Shankar:
An Overview of Grid File Transfer Patterns and Their Implementation in the Java CoG Kit. Neural Parallel Sci. Comput. 12(3): 329-352 (2004) - 2002
- [c1]Ravi K. Madduri, Cynthia S. Hood, William E. Allcock:
Reliable File Transfer in Grid Environments. LCN 2002: 737-738
Coauthor Index
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