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2020 – today
- 2024
[j13]Fabrizio Pucci
, Mehari B. Zerihun, Marianne Rooman, Alexander Schug:
pycofitness - Evaluating the fitness landscape of RNA and protein sequences. Bioinform. 40(2) (2024)- 2023
- [j12]Julian Herold, Eric Behle, Jakob Rosenbauer, Jacopo Ferruzzi, Alexander Schug:
Development of a scoring function for comparing simulated and experimental tumor spheroids. PLoS Comput. Biol. 19(3) (2023) - [c7]Oskar Taubert, Marie Weiel, Daniel Coquelin, Anis Farshian, Charlotte Debus, Alexander Schug, Achim Streit, Markus Götz:
Massively Parallel Genetic Optimization Through Asynchronous Propagation of Populations. ISC 2023: 106-124 - [i3]Oskar Taubert, Marie Weiel, Daniel Coquelin, Anis Farshian, Charlotte Debus, Alexander Schug, Achim Streit, Markus Götz:
Massively Parallel Genetic Optimization through Asynchronous Propagation of Populations. CoRR abs/2301.08713 (2023) - 2021
- [j11]Arthur Voronin, Alexander Schug:
pyrexMD: Workflow-Orientated Python Package for Replica Exchange Molecular Dynamics. J. Open Source Softw. 6(68): 3325 (2021) - [j10]Marie Weiel, Markus Götz, André Klein, Daniel Coquelin, Ralf Floca, Alexander Schug:
Dynamic particle swarm optimization of biomolecular simulation parameters with flexible objective functions. Nat. Mach. Intell. 3(8): 727-734 (2021) - [j9]Ines Reinartz, Mona Sarter, Julia Otten, Henning Höfig, Martina Pohl, Alexander Schug, Andreas M. Stadler, Jörg Fitter:
Structural Analysis of a Genetically Encoded FRET Biosensor by SAXS and MD Simulations. Sensors 21(12): 4144 (2021) - [c6]Stefan Kesselheim, Andreas Herten, Kai Krajsek, Jan Ebert, Jenia Jitsev, Mehdi Cherti, Michael Langguth, Bing Gong, Scarlet Stadtler, Amirpasha Mozaffari, Gabriele Cavallaro, Rocco Sedona, Alexander Schug, Alexandre Strube, Roshni Kamath, Martin G. Schultz, Morris Riedel, Thomas Lippert:
JUWELS Booster - A Supercomputer for Large-Scale AI Research. ISC Workshops 2021: 453-468 - [i2]Stefan Kesselheim, Andreas Herten, Kai Krajsek, Jan Ebert, Jenia Jitsev, Mehdi Cherti, Michael Langguth, Bing Gong, Scarlet Stadtler, Amirpasha Mozaffari, Gabriele Cavallaro, Rocco Sedona, Alexander Schug, Alexandre Strube, Roshni Kamath, Martin G. Schultz, Morris Riedel, Thomas Lippert:
JUWELS Booster - A Supercomputer for Large-Scale AI Research. CoRR abs/2108.11976 (2021) - 2020
- [j8]Mehari B. Zerihun, Fabrizio Pucci, Emanuel K. Peter, Alexander Schug:
pydca v1.0: a comprehensive software for direct coupling analysis of RNA and protein sequences. Bioinform. 36(7): 2264-2265 (2020) - [j7]Marco Berghoff, Jakob Rosenbauer, Felix Hoffmann, Alexander Schug:
Cells in Silico - introducing a high-performance framework for large-scale tissue modeling. BMC Bioinform. 21(1): 436 (2020) - [j6]Jakob Rosenbauer, Chengting Zhang, Benjamin Mattes, Ines Reinartz, Kyle Wedgwood, Simone Schindler, Claude Sinner, Steffen Scholpp, Alexander Schug:
Modeling of Wnt-mediated tissue patterning in vertebrate embryogenesis. PLoS Comput. Biol. 16(6) (2020) - [c5]Oskar Taubert, Markus Götz, Alexander Schug, Achim Streit:
Loss Scheduling for Class-Imbalanced Image Segmentation Problems. ICMLA 2020: 426-431
2010 – 2019
- 2019
- [j5]Oskar Taubert, Ines Reinartz, Henning Meyerhenke, Alexander Schug:
diSTruct v1.0: generating biomolecular structures from distance constraints. Bioinform. 35(24): 5337-5338 (2019) - [j4]Semih Turk, Alexander Schug, Reinhard Viga, Andreas Jupe, Holger Vogt:
Optimization of the dielectric layer for electrowetting on dielectric. Integr. 67: 50-59 (2019) - [j3]Marie Weiel, Ines Reinartz, Alexander Schug:
Rapid interpretation of small-angle X-ray scattering data. PLoS Comput. Biol. 15(3) (2019) - 2017
- [c4]Michael Wegner, Oskar Taubert, Alexander Schug, Henning Meyerhenke:
Maxent-Stress Optimization of 3D Biomolecular Models. ESA 2017: 70:1-70:15 - [i1]Michael Wegner, Oskar Taubert, Alexander Schug, Henning Meyerhenke:
Maxent-Stress Optimization of 3D Biomolecular Models. CoRR abs/1706.06805 (2017) - 2014
- [j2]Benjamin Lutz, Claude Sinner, Stefan Bozic, Ivan Kondov, Alexander Schug:
Native structure-based modeling and simulation of biomolecular systems per mouse click. BMC Bioinform. 15: 292 (2014) - [c3]Stefan Bozic, Jens Krüger, Claude Sinner, Benjamin Lutz, Alexander Schug, Ivan Kondov:
Integration of eSBMTools into the MoSGrid Portal Using the gUSE Technology. IWSG 2014: 85-90 - 2013
- [j1]Benjamin Lutz, Claude Sinner, Geertje Heuermann, Abhinav Verma, Alexander Schug:
eSBMTools 1.0: enhanced native structure-based modeling tools. Bioinform. 29(21): 2795-2796 (2013)
2000 – 2009
- 2007
- [c2]Abhinav Verma, Srinivasa M. Gopal, Alexander Schug, Jung S. Oh, Konstantin V. Klenin, Kyu H. Lee, Wolfgang Wenzel:
Massively Parallel All Atom Protein Folding in a Single Day. PARCO 2007: 527-534 - 2004
- [c1]Thomas Herges, Alexander Schug, Wolfgang Wenzel:
Protein Structure Prediction with Stochastic Optimization Methods: Folding and Misfolding the Villin Headpiece. ICCSA (3) 2004: 454-464
Coauthor Index
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