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2020 – today
- 2024
[j24]Jianran Ren, Jingyi Che, Peicong Gong, Xiaojun Wang, Xiangning Li, Anan Li
, Chi Xiao:
Cross comparison representation learning for semi-supervised segmentation of cellular nuclei in immunofluorescence staining. Comput. Biol. Medicine 171: 108102 (2024)- [j23]Wenwei Li, Wu Chen, Zimin Dai, Xiaokang Chai, Sile An, Zhuang Guan, Wei Zhou, Jianwei Chen, Hui Gong, Qingming Luo, Zhao Feng, Anan Li:
Graph-based cell pattern recognition for merging the multi-modal optical microscopic image of neurons. Comput. Methods Programs Biomed. 256: 108392 (2024) - [j22]Wu Chen, Mingwei Liao, Shengda Bao, Sile An, Wenwei Li, Xin Liu, Ganghua Huang, Hui Gong, Qingming Luo, Chi Xiao, Anan Li:
A hierarchically annotated dataset drives tangled filament recognition in digital neuron reconstruction. Patterns 5(8): 101007 (2024) - 2023
- [j21]Yuxin Li, Xuhua Liu, Xueyan Jia, Tao Jiang, Jianghao Wu, Qianlong Zhang, Junhuai Li, Xiangning Li, Anan Li:
A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution. Bioinform. 39(4) (2023) - [j20]Xin Liu, Anan Li, Yue Luo, Shengda Bao, Tao Jiang, Xiangning Li, Jing Yuan, Zhao Feng:
An interactive image segmentation method for the anatomical structures of the main olfactory bulb with micro-level resolution. Frontiers Neuroinformatics 17 (2023) - [j19]Ruifang Cao, Yunchao Ling, Jiayue Meng, Ao Jiang, Ruijin Luo, Qinwen He, Anan Li, Yujie Chen, Zoutao Zhang, Feng Liu, Yixue Li, Guoqing Zhang:
SMDB: a Spatial Multimodal Data Browser. Nucleic Acids Res. 51(W1): 553-559 (2023) - [j18]Tianfang Zhu, Gang Yao, Dongli Hu, Chuangchuang Xie, Pengcheng Li, Xiaoquan Yang, Hui Gong, Qingming Luo, Anan Li:
Data-Driven Morphological Feature Perception of Single Neuron With Graph Neural Network. IEEE Trans. Medical Imaging 42(10): 3069-3079 (2023) - 2022
- [j17]Yuxin Li, Tong Ren, Junhuai Li, Huaijun Wang, Xiangning Li, Anan Li:
VBNet: An end-to-end 3D neural network for vessel bifurcation point detection in mesoscopic brain images. Comput. Methods Programs Biomed. 214: 106567 (2022) - [j16]Xiaokang Chai, Yachao Di, Zhao Feng, Yue Guan, Guoqing Zhang, Anan Li, Qingming Luo:
Deep learning-based large-scale named entity recognition for anatomical region of mammalian brain. Quant. Biol. 10(3): 253 (2022) - [j15]Qing Huang, Tingting Cao, Shaoqun Zeng, Anan Li, Tingwei Quan:
Minimizing Probability Graph Connectivity Cost for Discontinuous Filamentary Structures Tracing in Neuron Image. IEEE J. Biomed. Health Informatics 26(7): 3092-3103 (2022) - 2021
- [j14]Tianfang Zhu, Yutong Han, Anan Li, Jing Yuan, Hui Gong, Yue Guan:
Denoising Across Data Acquisition Modalities for Mesoscopic Scale Optical Neuroimaging. IEEE Access 9: 23624-23632 (2021) - [j13]Hong Ni, Zhao Feng, Yue Guan, Xueyan Jia, Wu Chen, Tao Jiang, Qiuyuan Zhong, Jing Yuan, Miao Ren, Xiangning Li, Hui Gong, Qingming Luo, Anan Li:
DeepMapi: a Fully Automatic Registration Method for Mesoscopic Optical Brain Images Using Convolutional Neural Networks. Neuroinformatics 19(2): 267-284 (2021) - [j12]Hang Zhou, Shiwei Li, Anan Li, Qing Huang, Feng Xiong, Ning Li, Jiacheng Han, Hongtao Kang, Yijun Chen, Yun Li, Huimin Lin, Yu-Hui Zhang, Xiaohua Lv, Xiuli Liu, Hui Gong, Qingming Luo, Shaoqun Zeng, Tingwei Quan:
GTree: an Open-source Tool for Dense Reconstruction of Brain-wide Neuronal Population. Neuroinformatics 19(2): 305-317 (2021) - [i2]Tianfang Zhu, Yue Guan, Anan Li:
PointManifoldCut: Point-wise Augmentation in the Manifold for Point Clouds. CoRR abs/2109.07324 (2021) - [i1]Tianfang Zhu, Yue Guan, Anan Li:
Joint Optical Neuroimaging Denoising with Semantic Tasks. CoRR abs/2109.10499 (2021) - 2020
- [j11]Siqi Jiang, Zhengyu Pan, Zhao Feng, Yue Guan, Miao Ren, Zhangheng Ding, Shangbin Chen, Hui Gong, Qingming Luo, Anan Li:
Skeleton optimization of neuronal morphology based on three-dimensional shape restrictions. BMC Bioinform. 21(1): 395 (2020) - [j10]Yuxin Li, Anan Li, Junhuai Li, Hongfang Zhou, Ting Cao, Huaijun Wang, Kan Wang:
webTDat: A Web-Based, Real-Time, 3D Visualization Framework for Mesoscopic Whole-Brain Images. Frontiers Neuroinformatics 14: 542169 (2020) - [j9]Xiaofeng Xu, Yue Guan, Hui Gong, Zhao Feng, Wenjuan Shi, Anan Li, Miao Ren, Jing Yuan, Qingming Luo:
Automated Brain Region Segmentation for Single Cell Resolution Histological Images Based on Markov Random Field. Neuroinformatics 18(2): 181-197 (2020) - [j8]Shiwei Li, Tingwei Quan, Hang Zhou, Qing Huang, Tao Guan, Yijun Chen, Cheng Xu, Hongtao Kang, Anan Li, Ling Fu, Qingming Luo, Hui Gong, Shaoqun Zeng:
Brain-Wide Shape Reconstruction of a Traced Neuron Using the Convex Image Segmentation Method. Neuroinformatics 18(2): 199-218 (2020)
2010 – 2019
- 2019
- [j7]Anan Li, Yue Guan, Hui Gong, Qingming Luo:
Challenges of Processing and Analyzing Big Data in Mesoscopic Whole-brain Imaging. Genom. Proteom. Bioinform. 17(4): 337-343 (2019) - [j6]Shiwei Li, Tingwei Quan, Hang Zhou, Fangfang Yin, Anan Li, Ling Fu, Qingming Luo, Hui Gong, Shaoqun Zeng:
Identifying Weak Signals in Inhomogeneous Neuronal Images for Large-Scale Tracing of Sparsely Distributed Neurites. Neuroinformatics 17(4): 497-514 (2019) - 2017
- [j5]Shiwei Li, Hang Zhou, Tingwei Quan, Jing Li, Yuxin Li, Anan Li, Qingming Luo, Hui Gong, Shaoqun Zeng:
SparseTracer: the Reconstruction of Discontinuous Neuronal Morphology in Noisy Images. Neuroinformatics 15(2): 133-149 (2017) - 2016
- [j4]Zhao Feng, Anan Li, Hui Gong, Qingming Luo:
An Automatic Method for Nucleus Boundary Segmentation Based on a Closed Cubic Spline. Frontiers Neuroinformatics 10: 21 (2016) - 2014
- [j3]Jingpeng Wu, Yong He, Zhongqin Yang, Congdi Guo, Qingming Luo, Wei Zhou, Shangbin Chen, Anan Li, Benyi Xiong, Tao Jiang, Hui Gong:
3D BrainCV: Simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution. NeuroImage 87: 199-208 (2014) - [j2]Bo Li, Ling Gong, Ruiqi Wu, Anan Li, Fuqiang Xu:
Complex relationship between BOLD-fMRI and electrophysiological signals in different olfactory bulb layers. NeuroImage 95: 29-38 (2014) - 2013
- [j1]Hui Gong, Shaoqun Zeng, Cheng Yan, Xiaohua Lv, Zhongqin Yang, Tonghui Xu, Zhao Feng, Wenxiang Ding, Xiaoli Qi, Anan Li, Jingpeng Wu, Qingming Luo:
Continuously tracing brain-wide long-distance axonal projections in mice at a one-micron voxel resolution. NeuroImage 74: 87-98 (2013)
Coauthor Index
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