default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDThomas D. Otto
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2023
[j14]José Luis Ruiz
, Susanne Reimering, Juan David Escobar-Prieto, Nicolas M. B. Brancucci, Diego F. Echeverry, Abdirahman I Abdi, Matthias Marti, Elena Gómez-Díaz, Thomas D. Otto:
From contigs towards chromosomes: automatic improvement of long read assemblies (ILRA). Briefings Bioinform. 24(4) (2023)- [j13]William Haese-Hill, Kathryn Crouch, Thomas D. Otto:
peaks2utr: a robust Python tool for the annotation of 3′ UTRs. Bioinform. 39(3) (2023) - 2022
- [j12]Gavin Mackenzie, Rasmus W. Jensen, Thomas Lavstsen, Thomas D. Otto:
Varia: a tool for prediction, analysis and visualisation of variable genes. BMC Bioinform. 23(1): 52 (2022) - [j11]Alexandrina Pancheva, Helen Wheadon, Simon Rogers, Thomas D. Otto:
Using topic modeling to detect cellular crosstalk in scRNA-seq. PLoS Comput. Biol. 18(4) (2022)
2010 – 2019
- 2016
- [j10]Sascha Steinbiss, Fatima Silva-Franco, Brian P. Brunk, Bernardo Foth, Christiane Hertz-Fowler, Matthew Berriman, Thomas D. Otto:
Companion: a web server for annotation and analysis of parasite genomes. Nucleic Acids Res. 44(Webserver-Issue): W29-W34 (2016) - 2015
- [j9]Martin Hunt, Astrid Gall, Swee Hoe Ong, Jacqui Brener, Bridget Ferns, Philip J. R. Goulder, Eleni Nastouli, Jacqueline A. Keane, Paul Kellam, Thomas D. Otto:
IVA: accurate de novo assembly of RNA virus genomes. Bioinform. 31(14): 2374-2376 (2015) - 2013
- [j8]Tim Carver, Simon R. Harris, Thomas D. Otto, Matthew Berriman, Julian Parkhill, Jacqueline A. McQuillan:
BamView: visualizing and interpretation of next-generation sequencing read alignments. Briefings Bioinform. 14(2): 203-212 (2013) - 2012
- [c2]Sérgio Lifschitz, Carlos Juliano M. Viana, Cristian Tristão, Marcos Catanho, Wim M. Degrave, Antonio Basílio de Miranda, Márcia Bezerra, Thomas D. Otto:
Design and Implementation of ProteinWorldDB. BSB 2012: 144-155 - 2010
- [j7]Tim Carver, Ulrike Böhme, Thomas D. Otto, Julian Parkhill, Matthew Berriman:
BamView: viewing mapped read alignment data in the context of the reference sequence. Bioinform. 26(5): 676-677 (2010) - [j6]Thomas D. Otto, Marcos Catanho, Cristian Tristão, Márcia Bezerra, Renan Mathias Fernandes, Guilherme Steinberger Elias, Alexandre Capeletto Scaglia, Bill Bovermann, Viktors Berstis, Sérgio Lifschitz, Antonio Basílio de Miranda, Wim M. Degrave:
ProteinWorldDB: querying radical pairwise alignments among protein sets from complete genomes. Bioinform. 26(5): 705-707 (2010) - [j5]Thomas D. Otto, Mandy Sanders, Matthew Berriman, Chris Newbold:
Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology. Bioinform. 26(14): 1704-1707 (2010)
2000 – 2009
- 2009
- [j4]Samuel A. Assefa, Thomas M. Keane, Thomas D. Otto, Chris Newbold, Matthew Berriman:
ABACAS: algorithm-based automatic contiguation of assembled sequences. Bioinform. 25(15): 1968-1969 (2009) - 2008
- [j3]Thomas D. Otto, Leonardo H. F. Gomes, Marcelo Alves-Ferreira, Antonio Basílio de Miranda, Wim M. Degrave:
ReRep: Computational detection of repetitive sequences in genome survey sequences (GSS). BMC Bioinform. 9 (2008) - [j2]Thomas D. Otto, Ana Carolina R. Guimarães, Wim M. Degrave, Antonio Basílio de Miranda:
AnEnPi: identification and annotation of analogous enzymes. BMC Bioinform. 9 (2008) - 2007
- [j1]Thomas D. Otto, Andreas M. Thurnherr:
Efficient algorithms for finding sills in digital topographic maps. Comput. Geosci. 33(5): 678-684 (2007) - 2003
- [c1]Anke Meyer-Bäse, Thomas D. Otto, Thomas Martinetz, Dorothee Auer, Axel Wismüller:
Model-Free Functional MRI Analysis Using Topographic Independent Component Analysis. ESANN 2003: 509-514
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 21:19 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
