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ORCIDElena Beisswanger
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2010 – 2019
- 2013
[b1]Anna Elena Beißwanger:
Developing Ontological Background Knowledge for Biomedicine. University of Mannheim, 2013- 2012
- [j6]Elena Beisswanger, Udo Hahn:
Towards valid and reusable reference alignments - ten basic quality checks for ontology alignments and their application to three different reference data sets. J. Biomed. Semant. 3(S-1): S4 (2012) - [c17]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler:
Active Learning-Based Corpus Annotation - The PathoJen Experience. AMIA 2012 - [c16]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler, Jenny Traumüller, Susann Schröder, Kerstin Hornbostel:
Iterative Refinement and Quality Checking of Annotation Guidelines - How to Deal Effectively with Semantically Sloppy Named Entity Types, such as Pathological Phenomena. LREC 2012: 3881-3885 - [c15]Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
The Extraction of Pharmacogenetic and Pharmacogenomic Relations - A Case Study Using PharmGKB. Pacific Symposium on Biocomputing 2012: 376-387 - 2011
- [j5]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus. J. Biomed. Semant. 2(S-5): S11 (2011) - 2010
- [j4]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes
, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
Calbc Silver Standard Corpus. J. Bioinform. Comput. Biol. 8(1): 163-179 (2010) - [c14]Udo Hahn, Katrin Tomanek, Elena Beisswanger, Erik Faessler:
A Proposal for a Configurable Silver Standard. Linguistic Annotation Workshop 2010: 235-242 - [c13]Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
The GeneReg Corpus for Gene Expression Regulation Events - An Overview of the Corpus and its In-Domain and Out-of-Domain Interoperability. LREC 2010 - [c12]Dietrich Rebholz-Schuhmann, Antonio José Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Katrin Tomanek, Elena Beisswanger, Udo Hahn:
The CALBC Silver Standard Corpus for Biomedical Named Entities - A Study in Harmonizing the Contributions from Four Independent Named Entity Taggers. LREC 2010 - [c11]Elena Beisswanger, Joachim Wermter, Udo Hahn:
Aligning UniProt and MeSH - A Case Study on Human Protein Terms. MedInfo 2010: 1030-1034 - [c10]Elena Beisswanger:
Exploiting Relation Extraction for Ontology Alignment. ISWC (2) 2010: 289-296 - [c9]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC silver standard corpus. Semantic Mining in Biomedicine 2010
2000 – 2009
- 2009
- [j3]Stefan Schulz, Elena Beisswanger, László van den Hoek, Olivier Bodenreider, Erik M. van Mulligen:
Alignment of the UMLS semantic network with BioTop: methodology and assessment. Bioinform. 25(12) (2009) - [j2]David S. DeLuca, Elena Beisswanger, Joachim Wermter, Peter A. Horn, Udo Hahn, Rainer Blasczyk:
MaHCO: an ontology of the major histocompatibility complex for immunoinformatic applications and text mining. Bioinform. 25(16): 2064-2070 (2009) - 2008
- [j1]Elena Beisswanger, Stefan Schulz, Holger Stenzhorn, Udo Hahn:
BioTop: An upper domain ontology for the life sciencesA description of its current structure, contents and interfaces to OBO ontologies. Appl. Ontology 3(4): 205-212 (2008) - [c8]Michael Poprat, Elena Beisswanger, Udo Hahn:
Building a BioWordNet Using WordNet Data Structures and WordNet's Software Infrastructure-A Failure Story. SETQALNLP 2008: 31-39 - [c7]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Michael Poprat, Katrin Tomanek, Joachim Wermter:
Semantic Annotations for Biology: a Corpus Development Initiative at the Jena University Language & Information Engineering (JULIE) Lab. LREC 2008 - [c6]Elena Beisswanger, Vivian Lee, Jung-Jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, Udo Hahn:
Gene Regulation Ontology (GRO): Design Principles and Use Cases. MIE 2008: 9-14 - [c5]Holger Stenzhorn, Stefan Schulz, Elena Beisswanger, Udo Hahn, László van den Hoek, Erik M. van Mulligen:
BioTop and ChemTop - Top-Domain Ontologies for Biology and Chemistry. ISWC (Posters & Demos) 2008 - [i1]Elena Beisswanger, Michael Poprat, Udo Hahn:
WordNet-Inspired Terminological Resources for Bio-NLP. Ontologies and Text Mining for Life Sciences 2008 - 2007
- [c4]Elena Beisswanger, David S. DeLuca, Rainer Blasczyk, Udo Hahn:
An Ontology for Major Histocompatibility Complex (MHC) Alleles and Molecules. AMIA 2007 - [c3]Holger Stenzhorn, Elena Beisswanger, Stefan Schulz:
Towards a Top-Domain Ontology for Linking Biomedical Ontologies. MedInfo 2007: 1225-1229 - 2006
- [c2]Stefan Schulz, Elena Beisswanger, Joachim Wermter, Udo Hahn:
Towards an Upper-Level Ontology for Molecular Biology. AMIA 2006 - [c1]Stefan Schulz, Elena Beisswanger, Udo Hahn, Joachim Wermter, Anand Kumar, Holger Stenzhorn:
From GENIA to BIOTOP - Towards a Top-Level Ontology for Biology. FOIS 2006: 103-114
Coauthor Index
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