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ORCIDTrevor Bedford
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2020 – today
- 2024
[j15]Eslam Abousamra
, Marlin Figgins, Trevor Bedford:
Fitness models provide accurate short-term forecasts of SARS-CoV-2 variant frequency. PLoS Comput. Biol. 20(9): 1012443 (2024)- 2023
- [j14]Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford, John Huddleston:
Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition. Frontiers Bioinform. 3 (2023) - 2021
- [j13]John Huddleston, James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A. Neher, Emma B. Hodcroft:
Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. J. Open Source Softw. 6(57): 2906 (2021) - 2020
- [j12]Sarah Hilton, John Huddleston, Allison Black, Khrystyna North, Adam S. Dingens, Trevor Bedford, Jesse D. Bloom:
dms-view: Interactive visualization tool for deep mutational scanning data. J. Open Source Softw. 5(52): 2353 (2020) - [j11]Lauren Castro, Trevor Bedford, Lauren Ancel Meyers:
Early prediction of antigenic transitions for influenza A/H3N2. PLoS Comput. Biol. 16(2) (2020)
2010 – 2019
- 2018
- [j10]James Hadfield, Colin Megill, Sidney M. Bell, John Huddleston, Barney Potter, Charlton Callender, Pavel Sagulenko, Trevor Bedford, Richard A. Neher:
Nextstrain: real-time tracking of pathogen evolution. Bioinform. 34(23): 4121-4123 (2018) - 2017
- [j9]Gytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele, Nuno R. Faria, Daniel J. Park, Jason T. Ladner, Armando Arias, Danny Asogun, Filip Bielejec, Sarah L. Caddy, Matthew Cotten, Jonathan D'Ambrozio, Simon Dellicour, Antonino Di Caro, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans, Julian A. Hiscox, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu, Christine M. Malboeuf, Suzanne Mate, David A. Matthews, Christian B. Matranga, Luke W. Meredith, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan, Georgios Pollakis, Chantal B. Reusken, Mariano Sanchez-Lockhart, Stephen F. Schaffner, John S. Schieffelin, Rachel S. G. Sealfon, Etienne Simon-Loriere, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin, Mohamed A. Vandi, Simon J. Watson, Kendra West, Shannon Whitmer, Michael R. Wiley, Sarah M. Winnicki, Shirlee Wohl, Roman Wölfel, Nathan L. Yozwiak, Kristian G. Andersen, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser, George F. Gao, Robert F. Garry, Ian Goodfellow, Stephan Günther, Christian T. Happi, Edward C. Holmes, Brima Kargbo, Sakoba Keïta, Paul Kellam, Marion Koopmans, Jens H. Kuhn, Nicholas J. Loman, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios, Oliver G. Pybus, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut:
Virus genomes reveal factors that spread and sustained the Ebola epidemic. Nat. 544(7650): 309-315 (2017) - [j8]Nuno R. Faria, Joshua Quick, I. M. Claro, Julien Thézé, J. G. de Jesus, Marta Giovanetti, Moritz U. G. Kraemer, S. C. Hill, Allison Black, A. C. Da Costa, L. C. Franco, S. P. Silva, Chieh-Hsi Wu, Jayna Raghwani, Simon Cauchemez, Louis du Plessis, M. P. Verotti, W. K. de Oliveira, E. H. Carmo, G. E. Coelho, A. C. F. S. Santelli, L. C. Vinhal, C. M. Henriques, J. T. Simpson, Matthew Loose, Kristian G. Andersen, N. D. Grubaugh, S. Somasekar, C. Y. Chiu, J. E. Muñoz-Medina, C. R. Gonzalez-Bonilla, Carolina Fócil Arias, L. L. Lewis-Ximenez, S. A. Baylis, A. O. Chieppe, S. F. Aguiar, C. A. Fernandes, P. S. Lemos, B. L. S. Nascimento, H. A. O. Monteiro, I. C. Siqueira, M. G. de Queiroz, T. R. de Souza, J. F. Bezerra, M. R. Lemos, G. F. Pereira, D. Loudal, L. C. Moura, R. Dhalia, R. F. França, T. Magalhães, E. T. Marques Jr, Thomas Jaenisch, Gabriel da Luz Wallau, M. C. de Lima, V. Nascimento, E. M. de Cerqueira, M. M. de Lima, D. L. Mascarenhas, J. P. Moura Neto, A. S. Levin, T. R. Tozetto-Mendoza, S. N. Fonseca, M. C. Mendes-Correa, F. P. Milagres, Aluisio Segurado, Edward C. Holmes, Andrew Rambaut, Trevor Bedford, M. R. T. Nunes, Ester C. Sabino, Luis Carlos Alcantara, Nicholas J. Loman, Oliver G. Pybus:
Establishment and cryptic transmission of Zika virus in Brazil and the Americas. Nat. 546(7658): 406-410 (2017) - [j7]Ramon Lorenzo-Redondo, Helen R. Fryer, Trevor Bedford, Eun-Young Kim, John A. C. Archer, Sergei L. Kosakovsky Pond, Yoon-Seok Chung, Sudhir Penugonda, Jeffrey G. Chipman, Courtney V. Fletcher, Timothy W. Schacker, Michael H. Malim, Andrew Rambaut, Ashley T. Haase, Angela R. McLean, Steven M. Wolinsky:
Lorenzo-Redondo et al. reply. Nat. 551(7681): E10-E10 (2017) - 2016
- [j6]Michael D. Karcher, Julia A. Palacios, Trevor Bedford, Marc A. Suchard, Vladimir N. Minin:
Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference. PLoS Comput. Biol. 12(3) (2016) - 2015
- [j5]Richard A. Neher, Trevor Bedford:
nextflu: real-time tracking of seasonal influenza virus evolution in humans. Bioinform. 31(21): 3546-3548 (2015) - [j4]Trevor Bedford, Steven Riley, Ian G. Barr, Shobha Broor, Mandeep Chadha, Nancy J. Cox, Rodney S. Daniels, C. Palani Gunasekaran, Aeron C. Hurt, Anne Kelso, Alexander Klimov, Nicola S. Lewis, Xiyan Li, John W. McCauley, Takato Odagiri, Varsha Potdar, Andrew Rambaut, Yuelong Shu, Eugene Skepner, Derek J. Smith, Marc A. Suchard, Masato Tashiro, Dayan Wang, Xiyan Xu, Philippe Lemey, Colin A. Russell:
Global circulation patterns of seasonal influenza viruses vary with antigenic drift. Nat. 523(7559): 217-220 (2015) - 2014
- [j3]Michael J. Landis, Trevor Bedford:
Phylowood: interactive web-based animations of biogeographic and phylogeographic histories. Bioinform. 30(1): 123-124 (2014) - 2013
- [j2]Erik M. Volz, Katia Koelle, Trevor Bedford:
Viral Phylodynamics. PLoS Comput. Biol. 9(3) (2013) - 2011
- [j1]Edward B. Baskerville, Andy P. Dobson, Trevor Bedford, Stefano Allesina, T. Michael Anderson, Mercedes Pascual:
Spatial Guilds in the Serengeti Food Web Revealed by a Bayesian Group Model. PLoS Comput. Biol. 7(12) (2011)
Coauthor Index
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