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ORCIDFrontiers in Neuroinformatics, Volume 5
Volume 5, 2011
- Daniel J. Sperka, Jochen Ditterich:
Splash: A Software Tool for Stereotactic Planning of Recording Chamber Placement and Electrode Trajectories. 1 - Lisa J. Kjonigsen, Trygve B. Leergaard
, Menno Witter, Jan G. Bjaalie:
Digital Atlas of Anatomical Subdivisions and Boundaries of the Rat Hippocampal Region. 2 - Stephan Gerhard, Alessandro Daducci, Alia Lemkaddem, Reto Meuli, Jean-Philippe Thiran, Patric Hagmann:
The Connectome Viewer Toolkit: An Open Source Framework to Manage, Analyze, and Visualize Connectomes. 3 - Daniel S. Marcus, John W. Harwell, Timothy R. Olsen, Michael R. Hodge, Matthew F. Glasser, Fred W. Prior, Mark Jenkinson, Timothy O. Laumann, Sandra W. Curtiss, David C. Van Essen:
Informatics and Data Mining Tools and Strategies for the Human Connectome Project. 4 - Deepak Ropireddy, Giorgio A. Ascoli:
Potential Synaptic Connectivity of Different Neurons onto Pyramidal Cells in a 3D Reconstruction of the Rat Hippocampus. 5 - Andreas Daffertshofer, Bernadette C. M. van Wijk:
On the Influence of Amplitude on the Connectivity between Phases. 6 - Jørgen Sugar, Menno Witter, Niels van Strien, Natalie L. M. Cappaert:
The Retrosplenial Cortex: Intrinsic Connectivity and Connections with the (Para)Hippocampal Region in the Rat. An Interactive Connectome. 7 - Michael Hanke, Yaroslav O. Halchenko:
Neuroscience Runs on GNU/Linux. 8 - Bertrand Fontaine, Dan F. M. Goodman, Victor Benichoux, Romain Brette:
Brian Hears: Online Auditory Processing Using Vectorization Over Channels. 9 - Christoph Echtermeyer, Cheol E. Han, Anna Rotarska-Jagiela, Harald Mohr, Peter Uhlhaas, Marcus Kaiser:
Integrating Temporal and Spatial Scales: Human Structural Network Motifs Across Age and Region of Interest Size. 10 - Tilman Kispersky, Michael N. Economo, Pratik Randeria, John A. White:
GenNet: A Platform for Hybrid Network Experiments. 11 - Leon French, Powell Patrick Cheng Tan, Paul Pavlidis:
Large-Scale Analysis of Gene Expression and Connectivity in the Rodent Brain: Insights through Data Integration. 12 - Krzysztof J. Gorgolewski, Christopher D. Burns, Cindee M. Madison, Dav Clark, Yaroslav O. Halchenko, Michael L. Waskom, Satrajit S. Ghosh:
Nipype: A Flexible, Lightweight and Extensible Neuroimaging Data Processing Framework in Python. 13 - Wei Wu, Diek W. Wheeler, Gordon Pipa:
Bivariate and Multivariate NeuroXidence: A Robust and Reliable Method to Detect Modulations of Spike-Spike Synchronization Across Experimental Conditions. 14 - James R. Kozloski, John Wagner:
An Ultrascalable Solution to Large-scale Neural Tissue Simulation. 15 - Jan Grewe, Thomas Wachtler, Jan Benda:
A Bottom-up Approach to Data Annotation in Neurophysiology. 16 - Russell A. Poldrack, Aniket Kittur, Donald J. Kalar, Eric Miller, Christian Seppa, Yolanda Gil, Douglas Stott Parker, Fred W. Sabb, Robert M. Bilder:
The Cognitive Atlas: Toward a Knowledge Foundation for Cognitive Neuroscience. 17 - Nico S. Gorbach, Christoph Schütte, Corina Melzer, Mathias Goldau, Olivia Sujazow, Jenia Jitsev, Tania S. Douglas, Marc Tittgemeyer:
Hierarchical Information-Based Clustering for Connectivity-Based Cortex Parcellation. 18 - Micah Richert, Jayram Moorkanikara Nageswaran, Nikil D. Dutt, Jeffrey L. Krichmar:
An Efficient Simulation Environment for Modeling Large-Scale Cortical Processing. 19 - Roman Borisyuk, Abul Kalam al Azad, Deborah Conte, Alan Roberts, Stephen R. Soffe:
Modeling the Connectome of a Simple Spinal Cord. 20 - Jin Hyung Lee:
Tracing Activity Across the Whole Brain Neural Network with Optogenetic Functional Magnetic Resonance Imaging. 21 - Ramon Casanova, Christopher T. Whitlow, Benjamin C. Wagner, Jeff Williamson, Sally A. Shumaker, Joseph A. Maldjian, Mark A. Espeland:
High Dimensional Classification of Structural MRI Alzheimer's Disease Data Based on Large Scale Regularization. 22 - Anastasia Yendiki, Patricia Panneck, Priti Srinivasan, Allison Stevens, Lilla Zöllei, Jean Augustinack, Ruopeng Wang, David H. Salat, Stefan Ehrlich, Tim E. J. Behrens, Saâd Jbabdi, Randy L. Gollub, Bruce Fischl:
Automated Probabilistic Reconstruction of White-Matter Pathways in Health and Disease Using an Atlas of the Underlying Anatomy. 23 - Marcelo Tallis, Richard H. Thompson, Thomas A. Russ, Gully A. P. C. Burns:
Knowledge Synthesis with Maps of Neural Connectivity. 24 - Dimiter Prodanov:
Data Ontology and an Information System Realization for Web-Based Management of Image Measurements. 25 - Pedro A. Valdés-Hernández, Akira Sumiyoshi, Hiroi Nonaka, Risa Haga, Eduardo Aubert-Vásquez, Takeshi Ogawa, Yasser Iturria-Medina, Jorge J. Riera, Ryuta Kawashima:
An in vivo MRI Template Set for Morphometry, Tissue Segmentation, and fMRI Localization in Rats. 26 - James Voyvodic, Gary H. Glover, Douglas N. Greve, Syam Gadde, The FBIRN Consortium:
Automated real-time behavioral and physiological data acquisition and display integrated with stimulus presentation for fMRI. 27 - Hubertus Axer, Sindy Beck, Markus Axer, Friederike Schuchardt, Jörn Heepe, Anja Flücken, Martina Axer, Andreas Prescher, Otto W. Witte:
Microstructural Analysis of Human White Matter Architecture Using Polarized Light Imaging: Views from Neuroanatomy. 28 - Ji Ryang Chung, Chul Sung, David Mayerich, Jaerock Kwon, Daniel E. Miller, Todd Huffman, John Keyser, Louise C. Abbott, Yoonsuck Choe:
Multiscale Exploration of Mouse Brain Microstructures Using the Knife-Edge Scanning Microscope Brain Atlas. 29 - Gernot R. Müller-Putz, Christian Breitwieser, Febo Cincotti, Robert Leeb, Martijn Schreuder, Francesco Leotta, Michele Tavella, Luigi Bianchi, Alex Kreilinger, Andrew Ramsay, Martin Rohm, Max Sagebaum, Luca Tonin, Christa Neuper, José del R. Millán:
Tools for Brain-Computer Interaction: A General Concept for a Hybrid BCI. 30 - Jessica A. Turner, Susan R. Lane, Henry Jeremy Bockholt, Vince D. Calhoun:
The Clinical Assessment and Remote Administration Tablet. 31 - Sergey L. Gratiy, Anna Devor, Gaute T. Einevoll, Anders M. Dale:
On the Estimation of Population-Specific Synaptic Currents from Laminar Multielectrode Recordings. 32 - Adam Scott, William Courtney, Dylan Wood, Raul de la Garza, Susan R. Lane, Margaret D. King, Runtang Wang, Jody Roberts, Jessica A. Turner, Vince D. Calhoun:
COINS: An Innovative Informatics and Neuroimaging Tool Suite Built for Large Heterogeneous Datasets. 33 - Markus Axer, David Gräßel, Melanie Kleiner, Jürgen Dammers, Timo Dickscheid, Julia Reckfort, Tim Hütz, Björn Eiben, Uwe Pietrzyk, Karl Zilles, Katrin Amunts:
High-Resolution Fiber Tract Reconstruction in the Human Brain by Means of Three-Dimensional Polarized Light Imaging. 34 - Susanne Kunkel, Tobias C. Potjans, Jochen M. Eppler, Hans Ekkehard Plesser, Abigail Morrison, Markus Diesmann:
Meeting the Memory Challenges of Brain-Scale Network Simulation. 35 - Rajnish Ranjan, Georges Khazen, Luca Gambazzi, Srikanth Ramaswamy, Sean L. Hill, Felix Schürmann, Henry Markram:
Channelpedia: An Integrative and Interactive Database for Ion Channels. 36 - Samir Das, Alex P. Zijdenbos, Jonathan Harlap, Dario Vins, Alan C. Evans:
LORIS: a web-based data management system for multi-center studies. 37
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