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ORCIDGenomics, Proteomics & Bioinformatics, Volume 13
Volume 13, Number 1, February 2015
- Runsheng Chen
:
On Bioinformatic Resources. 1-3
- Yanxiao Feng, Yuechuan Zhang, Cuifeng Ying, Deqiang Wang, Chunlei Du:
Nanopore-based Fourth-generation DNA Sequencing Technology. 4-16 - Jian Zhang, Sha Li, Lu Li, Meng Li, Chongye Guo, Jun Yao, Shuangli Mi:
Exosome and Exosomal MicroRNA: Trafficking, Sorting, and Function. 17-24
- Christopher M. Colangelo, Mark A. Shifman, Kei-Hoi Cheung, Kathryn L. Stone, Nicholas Carriero, Erol E. Gulcicek, TuKiet T. Lam, Terence Wu, Robert D. Bjornson, Can Bruce, Angus C. Nairn, Jesse Rinehart, Perry L. Miller, Kenneth R. Williams:
YPED: An Integrated Bioinformatics Suite and Database for Mass Spectrometry-based Proteomics Research. 25-35
- Tao Chen, Jie Zhao, Jie Ma, Yunping Zhu:
Web Resources for Mass Spectrometry-based Proteomics. 36-39 - Ting Wei, Xing Peng, Lili Ye, Jiajia Wang, Fuhai Song, Zhouxian Bai, Guangchun Han, Fengmin Ji, Hongxing Lei:
Web Resources for Stem Cell Research. 40-45 - Yadong Yang, Xunong Dong, Bingbing Xie, Nan Ding, Juan Chen, Yongjun Li, Qian Zhang, Hongzhu Qu, Xiangdong Fang:
Databases and Web Tools for Cancer Genomics Study. 46-50 - Guoqing Zhang, Yunsheng Zhang, Yunchao Ling, Jia Jia:
Web Resources for Pharmacogenomics. 51-54 - Dong Zou, Lina Ma, Jun Yu, Zhang Zhang:
Biological Databases for Human Research. 55-63 - Bixia Tang, Yanqing Wang, Junwei Zhu, Wenming Zhao:
Web Resources for Model Organism Studies. 64-68 - Qinglan Sun, Li Liu, Linhuan Wu, Wei Li, Quanhe Liu, Jianyuan Zhang, Di Liu, Juncai Ma:
Web Resources for Microbial Data. 69-72 - Jing-Fa Xiao, Zhewen Zhang, Jiayan Wu, Jun Yu:
A Brief Review of Software Tools for Pangenomics. 73-76
Volume 13, Number 2, 2015
- Kenneth B. Storey:
The Gray Mouse Lemur: A Model for Studies of Primate Metabolic Rate Depression. 77-80
- Kyle K. Biggar, Cheng-Wei Wu, Shannon N. Tessier, Jing Zhang, Fabien Pifferi, Martine Perret, Kenneth B. Storey:
Primate Torpor: Regulation of Stress-activated Protein Kinases During Daily Torpor in the Gray Mouse Lemur, Microcebus murinus. 81-90 - Shannon N. Tessier, Jing Zhang, Kyle K. Biggar, Cheng-Wei Wu, Fabien Pifferi, Martine Perret, Kenneth B. Storey:
Regulation of the PI3K/AKT Pathway and Fuel Utilization During Primate Torpor in the Gray Mouse Lemur, Microcebus murinus. 91-102 - Jing Zhang, Shannon N. Tessier, Kyle K. Biggar, Cheng-Wei Wu, Fabien Pifferi, Martine Perret, Kenneth B. Storey:
Regulation of Torpor in the Gray Mouse Lemur: Transcriptional and Translational Controls and Role of AMPK Signaling. 103-110 - Kyle K. Biggar, Cheng-Wei Wu, Shannon N. Tessier, Jing Zhang, Fabien Pifferi, Martine Perret, Kenneth B. Storey:
Modulation of Gene Expression in Key Survival Pathways During Daily Torpor in the Gray Mouse Lemur, Microcebus murinus. 111-118 - Cheng-Wei Wu, Kyle K. Biggar, Jing Zhang, Shannon N. Tessier, Fabien Pifferi, Martine Perret, Kenneth B. Storey:
Induction of Antioxidant and Heat Shock Protein Responses During Torpor in the Gray Mouse Lemur, Microcebus murinus. 119-126 - Shannon N. Tessier, Barbara A. Katzenback, Fabien Pifferi, Martine Perret, Kenneth B. Storey:
Cytokine and Antioxidant Regulation in the Intestine of the Gray Mouse Lemur (Microcebus murinus) During Torpor. 127-135
Volume 13, Number 3, June 2015
- Xue Liu, Lili Hao, Dayong Li, Lihuang Zhu, Songnian Hu:
Long Non-coding RNAs and Their Biological Roles in Plants. 137-147 - Rahul Shubhra Mandal, Sudipto Saha, Santasabuj Das:
Metagenomic Surveys of Gut Microbiota. 148-158
- Sachli Zafari, Christina Backes, Petra Leidinger, Eckart Meese, Andreas Keller:
Regulatory MicroRNA Networks: Complex Patterns of Target Pathways for Disease-related and Housekeeping MicroRNAs. 159-168 - Leili Tapak, Massoud Saidijam, Majid Sadeghifar, Jalal Poorolajal, Hossein Mahjub:
Competing Risks Data Analysis with High-dimensional Covariates: An Application in Bladder Cancer. 169-176
- Yang Liu, Steve Baker, Hui Jiang, Gary W. Stuart, Yongsheng Bai:
Correlating Bladder Cancer Risk Genes with Their Targeting MicroRNAs Using MMiRNA-Tar. 177-182 - Zara Ghodsi, Emmanuel Sirimal Silva, Hossein Hassani:
Bicoid Signal Extraction with a Selection of Parametric and Nonparametric Signal Processing Techniques. 183-191
- Ahmed Abdullah, S. M. Sabbir Alam, Munawar Sultana, M. Anwar Hossain:
BioCluster: Tool for Identification and Clustering of Enterobacteriaceae Based on Biochemical Data. 192-199
- Yanxiao Feng, Yuechuan Zhang, Cuifeng Ying, Deqiang Wang, Chunlei Du:
Corrigendum to 'Nanopore-based Fourth-generation DNA Sequencing Technology' [GPB 144 (2015) - GPB 13/1 (4-16)]. 200-201 - Yadong Yang, Xunong Dong, Bingbing Xie, Nan Ding, Juan Chen, Yongjun Li, Qian Zhang, Hongzhu Qu, Xiangdong Fang:
Corrigendum to 'Databases and Web Tools for Cancer Genomics Study' [GPB 137 (2015) - GPB 13/1 (46-50)]. 202-203
Volume 13, Number 4, August 2015
- Quan-Zhen Li, Edward K. Wakeland:
Autoimmune Diseases in the Bioinformatics Paradigm. 205-207
- Yigang Tong:
Metagenome-wide Association Studies Potentiate Precision Medicine for Rheumatoid Arthritis. 208-209
- Honglin Zhu, Hui Luo, Mei Yan, Xiaoxia Zuo, Quan-Zhen Li:
Autoantigen Microarray for High-throughput Autoantibody Profiling in Systemic Lupus Erythematosus. 210-218 - Weiqian Chen, Heng Cao, Jin Lin, Nancy Olsen, Song Guo Zheng:
Biomarkers for Primary Sjögren's Syndrome. 219-223 - Shan Jiang, Taylor E. Hinchliffe, Tianfu Wu:
Biomarkers of An Autoimmune Skin Disease - Psoriasis. 224-233 - Yisha Li, Jing Huang, Muyao Guo, Xiaoxia Zuo:
MicroRNAs Regulating Signaling Pathways: Potential Biomarkers in Systemic Sclerosis. 234-241 - Yiyangzi Ma, Na Shi, Mengtao Li, Fei Chen, Haitao Niu:
Applications of Next-generation Sequencing in Systemic Autoimmune Diseases. 242-249
- David H. Warshauer, Jennifer D. Churchill, Nicole Novroski, Jonathan L. King, Bruce Budowle:
Novel Y-chromosome Short Tandem Repeat Variants Detected Through the Use of Massively Parallel Sequencing. 250-257 - Qiyan Wang, Jian Bai, Amir Abliz, Ying Liu, Kenan Gong, Jingjing Li, Wenjie Shi, Yaqi Pan, Fangfang Liu, Shujuan Lai, Haijun Yang, Changdong Lu, Lixin Zhang, Wei Chen, Ruiping Xu, Hong Cai, Yang Ke, Changqing Zeng:
An Old Story Retold: Loss of G1 Control Defines A Distinct Genomic Subtype of Esophageal Squamous Cell Carcinoma. 258-270
Volume 13, Number 5, October 2015
- Fangqing Zhao, Vladimir B. Bajic:
The Value and Significance of Metagenomics of Marine Environments. 271-274
- Houjin Zhang, Kang Ning:
The Tara Oceans Project: New Opportunities and Greater Challenges Ahead. 275-277
- Anthony Rhoads, Kin-Fan Au:
PacBio Sequencing and Its Applications. 278-289 - Amani D. Alma'abadi, Takashi Gojobori, Katsuhiko Mineta:
Marine Metagenome as A Resource for Novel Enzymes. 290-295
- Pravin Dudhagara, Sunil Bhavsar, Chintan Bhagat, Anjana Ghelani, Shreyas Bhatt, Rajesh Patel:
Web Resources for Metagenomics Studies. 296-303
- André Antunes, Intikhab Alam, Marta Filipa Simões, Camille Daniels, Ari J. S. Ferreira, Rania Siam, Hamza El-Dorry, Vladimir B. Bajic:
First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea. 304-309 - Marta Filipa Simões, André Antunes, Cristiane A. Ottoni, Mohammad Shoaib Amini, Intikhab Alam, Hanin Alzubaidy, Noor-Azlin Mokhtar, John A. C. Archer, Vladimir B. Bajic:
Soil and Rhizosphere Associated Fungi in Gray Mangroves (Avicennia marina) from the Red Sea - A Metagenomic Approach. 310-320
- Guanghong Zuo, Bailin Hao:
CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy. 321-331
Volume 13, Number 6, December 2015
- Dongyuan Ma, Feng Liu:
Genome Editing and Its Applications in Model Organisms. 336-344 - Manxia An, Youhe Gao:
Urinary Biomarkers of Brain Diseases. 345-354
- Pablo Smircich, María Ana Duhagon, Beatriz Garat:
Conserved Curvature of RNA Polymerase I Core Promoter Beyond rRNA Genes: The Case of the Tritryps. 355-363 - Wanlin Zhang, Hailing Wang, Xiaomin Guan, Qing Niu, Wei Li:
Variant rs2237892 of KCNQ1 Is Potentially Associated with Hypertension and Macrovascular Complications in Type 2 Diabetes Mellitus in A Chinese Han Population. 364-370
- Jian Zhao, Mingyuan Yang, Jie Shao, Yushu Bai, Ming Li:
Association Between VDR FokI Polymorphism and Intervertebral Disk Degeneration. 371-376
- Fan Zhang, Li Cui, Michael D. Kuo:
Diversity of Gene Expression in Hepatocellular Carcinoma Cells. 377-382
- Yanxiao Feng, Yuechuan Zhang, Cuifeng Ying, Deqiang Wang, Chunlei Du:
Corrigendum to 'Nanopore-based Fourth-generation DNA Sequencing Technology' [GPB 144 (2015) - GPB 13/1 (4-16)]. 383
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