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ORCIDDaniel J. Brat
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2010 – 2019
- 2019
[j6]Floris P. Barthel
, Kevin C. Johnson, Frederick S. Varn, Anzhela D. Moskalik, Georgette Tanner, Emre Kocakavuk, Kevin J. Anderson, Olajide Abiola, Kenneth D. Aldape, Kristin D. Alfaro, Donat Alpar, Samirkumar B. Amin, David M. Ashley, Pratiti Bandopadhayay, Jill S. Barnholtz-Sloan, Rameen Beroukhim, Christoph Bock, Priscilla K. Brastianos, Daniel J. Brat, Andrew R. Brodbelt, Alexander F. Bruns, Ketan R. Bulsara, Aruna Chakrabarty, Arnab Chakravarti, Jeffrey H. Chuang, Elizabeth B. Claus, Elizabeth J. Cochran, Jennifer Connelly, Joseph F. Costello, Gaetano Finocchiaro, Michael N. Fletcher, Pim J. French, Hui K. Gan, Mark R. Gilbert, Peter V. Gould, Matthew R. Grimmer, Antonio Iavarone, Azzam Ismail, Michael D. Jenkinson, Mustafa Khasraw, Hoon Kim, Mathilde C. M. Kouwenhoven, Peter S. LaViolette, Meihong Li, Peter Lichter, Keith L. Ligon, Allison K. Lowman, Tathiane M. Malta, Tali Mazor, Kerrie L. McDonald, Annette M. Molinaro, Do-Hyun Nam, Naema Nayyar, Ho Keung Ng, Chew Yee Ngan, Simone P. Niclou, Johanna M. Niers, Houtan Noushmehr, Javad Noorbakhsh, D. Ryan Ormond, Chul-Kee Park, Laila M. Poisson, Raul Rabadan, Bernhard Radlwimmer, Ganesh Rao, Guido Reifenberger, Jason K. Sa, Michael Schuster, Brian L. Shaw, Susan C. Short, Peter A. E. Sillevis Smitt, Andrew E. Sloan, Marion Smits, Hiromichi Suzuki, Ghazaleh Tabatabai, Erwin G. Van Meir, Colin Watts, Michael Weller, Pieter Wesseling, Bart A. Westerman, Georg Widhalm, Adelheid Woehrer, W. K. Alfred Yung, Gelareh Zadeh, Jason T. Huse, John F. De Groot, Lucy F. Stead, Roel G. W. Verhaak:
Longitudinal molecular trajectories of diffuse glioma in adults. Nat. 576(7785): 112-120 (2019)- 2018
- [c15]Xiaoyuan Guo, Hanyi Yu, Blair J. Rossetti, George Teodoro, Daniel J. Brat, Jun Kong:
Clumped Nuclei Segmentation with Adjacent Point Match and Local Shape-Based Intensity Analysis in Fluorescence Microscopy Images. EMBC 2018: 3410-3413 - [c14]Mousumi Roy, Fusheng Wang, George Teodoro, Jose Velazqeuz Vega, Daniel J. Brat, Jun Kong:
Analysis of Cellular Feature Differences of Astrocytomas with Distinct Mutational Profiles Using Digitized Histopathology Images. EMBC 2018: 4644-4647 - [i2]Mousumi Roy, Fusheng Wang, George Teodoro, Jose Velazqeuz Vega, Daniel J. Brat, Jun Kong:
Analysis of Cellular Feature Differences of Astrocytomas with Distinct Mutational Profiles Using Digitized Histopathology Images. CoRR abs/1806.09093 (2018) - [i1]Xiaoyuan Guo, Hanyi Yu, Blair J. Rossetti, George Teodoro, Daniel J. Brat, Jun Kong:
Clumped Nuclei Segmentation with Adjacent Point Match and Local Shape based Intensity Analysis for Overlapped Nuclei in Fluorescence In-Situ Hybridization Images. CoRR abs/1808.04795 (2018) - 2017
- [c13]Blair J. Rossetti, Fusheng Wang, Pengyue Zhang, George Teodoro, Daniel J. Brat, Jun Kong:
Dynamic registration for gigapixel serial whole slide images. ISBI 2017: 424-428 - [c12]Pengyue Zhang, Fusheng Wang, George Teodoro, Yanhui Liang, Daniel J. Brat, Jun Kong:
Automated level set segmentation of histopathologic cells with sparse shape prior support and dynamic occlusion constraint. ISBI 2017: 718-722 - 2016
- [c11]Jun Kong, Pengyue Zhang, Yanhui Liang, George Teodoro, Daniel J. Brat, Fusheng Wang:
Robust cell segmentation for histological images of Glioblastoma. ISBI 2016: 1041-1045 - 2015
- [c10]Yue Hou, Lee A. D. Cooper, Scott Wilkinson, Adam I. Marcus, Daniel J. Brat:
Spatiotemporal visualization of cell membrane dynamics and protein colocalization reveals correlation between membrane dynamics and metastatic invasion. BCB 2015: 476-477 - [c9]Jun Kong, Fusheng Wang, George Teodoro, Yanhui Liang, Yangyang Zhu, Carol Tucker-Burden, Daniel J. Brat:
Automated cell segmentation with 3D fluorescence microscopy images. ISBI 2015: 1212-1215 - 2013
- [j5]David A. Gutman, Jake Cobb, Dhananjaya Somanna, Yuna Park, Fusheng Wang, Tahsin M. Kurç, Joel H. Saltz, Daniel J. Brat, Lee A. D. Cooper:
Research and applications: Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data. J. Am. Medical Informatics Assoc. 20(6): 1091-1098 (2013) - [c8]Jun Kong, Fusheng Wang, George Teodoro, Lee A. D. Cooper, Carlos Sanchez Moreno, Tahsin M. Kurç, Tony Pan, Joel H. Saltz, Daniel J. Brat:
High-performance computational analysis of glioblastoma pathology images with database support identifies molecular and survival correlates. BIBM 2013: 229-236 - 2012
- [j4]Lee A. D. Cooper, Jun Kong, David A. Gutman, Fusheng Wang, Jingjing Gao, Christina Appin, Sharath R. Cholleti, Tony Pan, Ashish Sharma, Lisa Scarpace, Tom Mikkelsen, Tahsin M. Kurç, Carlos Sanchez Moreno, Daniel J. Brat, Joel H. Saltz:
Integrated morphologic analysis for the identification and characterization of disease subtypes. J. Am. Medical Informatics Assoc. 19(2): 317-323 (2012) - [j3]Lee A. D. Cooper, Alexis B. Carter, Alton B. Farris, Fusheng Wang, Jun Kong, David A. Gutman, Patrick M. Widener, Tony C. Pan, Sharath R. Cholleti, Ashish Sharma, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz:
Digital Pathology: Data-Intensive Frontier in Medical Imaging. Proc. IEEE 100(4): 991-1003 (2012) - [c7]Tahsin M. Kurç, Joel H. Saltz, George Teodoro, Tony Pan, Lee A. D. Cooper, Jun Kong, David A. Gutman, Daniel J. Brat, Fusheng Wang:
High Performance Computing for Integrative Analysis of Large Pathology Image Datasets. AMIA 2012 - 2011
- [j2]Jun Kong, Lee A. D. Cooper, Fusheng Wang, David A. Gutman, Jingjing Gao, Candace Chisolm, Ashish Sharma, Tony Pan, Erwin G. Van Meir, Tahsin M. Kurç, Carlos Sanchez Moreno, Joel H. Saltz, Daniel J. Brat:
Integrative, Multimodal Analysis of Glioblastoma Using TCGA Molecular Data, Pathology Images, and Clinical Outcomes. IEEE Trans. Biomed. Eng. 58(12): 3469-3474 (2011) - [c6]Jun Kong, Lee A. D. Cooper, Carlos Sanchez Moreno, Fusheng Wang, Tahsin M. Kurç, Joel H. Saltz, Daniel J. Brat:
In silico analysis of nuclei in glioblastoma using large-scale microscopy images improves prediction of treatment response. EMBC 2011: 87-90 - [c5]Jun Kong, Lee A. D. Cooper, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz:
Towards building computerized image analysis framework for nucleus discrimination in microscopy images of diffuse glioma. EMBC 2011: 6605-6608 - [c4]Lee A. D. Cooper, Jun Kong, Fusheng Wang, Tahsin M. Kurç, Carlos Sanchez Moreno, Daniel J. Brat, Joel H. Saltz:
Morphological signatures and genomic correlates in glioblastoma. ISBI 2011: 1624-1627 - [c3]Jun Kong, Lee A. D. Cooper, Fusheng Wang, Candace Chisolm, Carlos Sanchez Moreno, Tahsin M. Kurç, Patrick M. Widener, Daniel J. Brat, Joel H. Saltz:
A comprehensive framework for classification of nuclei in digital microscopy imaging: An application to diffuse gliomas. ISBI 2011: 2128-2131 - [c2]Jun Kong, Lee A. D. Cooper, Ashish Sharma, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz:
A new steerable pressure force for parametric deformable models. Medical Imaging: Image Processing 2011: 79623N - 2010
- [j1]Lee A. D. Cooper, Jun Kong, David A. Gutman, Fusheng Wang, Sharath R. Cholleti, Tony C. Pan, Patrick M. Widener, Ashish Sharma, Tom Mikkelsen, Adam E. Flanders, Daniel L. Rubin, Erwin G. Van Meir, Tahsin M. Kurç, Carlos Sanchez Moreno, Daniel J. Brat, Joel H. Saltz:
An Integrative Approach for In Silico Glioma Research. IEEE Trans. Biomed. Eng. 57(10): 2617-2621 (2010) - [c1]Jun Kong, Lee A. D. Cooper, Ashish Sharma, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz:
Texture based image recognition in microscopy images of diffuse gliomas with multi-class gentle boosting mechanism. ICASSP 2010: 457-460
Coauthor Index
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