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ORCIDKatherine J. Denby
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2020 – today
- 2024
[j9]Juan Cordero
, Kevin Donkers, Ian Harrison, Sarah Bridle, Angelina Frankowska, Michelle Cain, Neil Ward, Jez Frendenburgh, Edward Pope, Alana Kluczkovski, Ximena Schmidt, Jacqueline Silva, Christian Reynolds, Katherine J. Denby, Bob Doherty, Aled Jones:
AgriFoodPy: a package for modelling food systems. J. Open Source Softw. 9(97): 6305 (2024)
2010 – 2019
- 2018
- [j8]Krzysztof Polanski, Bo Gao, Sam A. Mason, Paul Brown, Sascha Ott, Katherine J. Denby, David L. Wild:
Bringing numerous methods for expression and promoter analysis to a public cloud computing service. Bioinform. 34(5): 884-886 (2018) - 2014
- [j7]Krzysztof Polanski, Johanna Rhodes, Claire Hill, Peijun Zhang, Dafyd J. Jenkins, Steven J. Kiddle, Aleksey Jironkin, Jim Beynon, Vicky Buchanan-Wollaston, Sascha Ott, Katherine J. Denby:
Wigwams: identifying gene modules co-regulated across multiple biological conditions. Bioinform. 30(7): 962-970 (2014) - 2012
- [j6]Christopher A. Penfold, Vicky Buchanan-Wollaston, Katherine J. Denby, David L. Wild:
Nonparametric Bayesian inference for perturbed and orthologous gene regulatory networks. Bioinform. 28(12): 233-241 (2012) - 2010
- [j5]Steven J. Kiddle, Oliver P. F. Windram, Stuart McHattie, Andrew Meade, Jim Beynon, Vicky Buchanan-Wollaston, Katherine J. Denby, Sach Mukherjee:
Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana. Bioinform. 26(3): 355-362 (2010) - [j4]Edward R. Morrissey, Miguel A. Juárez, Katherine J. Denby, Nigel J. Burroughs:
On reverse engineering of gene interaction networks using time course data with repeated measurements. Bioinform. 26(18): 2305-2312 (2010) - [j3]Oliver Stegle, Katherine J. Denby, Emma J. Cooke, David L. Wild, Zoubin Ghahramani, Karsten M. Borgwardt:
A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series. J. Comput. Biol. 17(3): 355-367 (2010)
2000 – 2009
- 2009
- [j2]Richard S. Savage, Katherine A. Heller, Yang Xu, Zoubin Ghahramani, William M. Truman, Murray Grant, Katherine J. Denby, David L. Wild:
R/BHC: fast Bayesian hierarchical clustering for microarray data. BMC Bioinform. 10 (2009) - [j1]Cunlu Zou, Katherine J. Denby, Jianfeng Feng:
Granger causality vs. dynamic Bayesian network inference: a comparative study. BMC Bioinform. 10: 401 (2009) - [c2]Oliver Stegle, Katherine J. Denby, David L. Wild, Stuart McHattie, Andrew Meade, Zoubin Ghahramani, Karsten M. Borgwardt:
Discovering Temporal Patterns of Differential Gene Expression in Microarray Time Series. GCB 2009: 133-142 - [c1]Oliver Stegle, Katherine J. Denby, David L. Wild, Zoubin Ghahramani, Karsten M. Borgwardt:
A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series. RECOMB 2009: 201-216
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