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Amanda Birmingham
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2010 – 2019
- 2019
- [j4]Adam Rule
, Amanda Birmingham
, Cristal Zuñiga
, Ilkay Altintas
, Shih-Cheng Huang
, Rob Knight
, Niema Moshiri
, Mai H. Nguyen, Sara Brin Rosenthal
, Fernando Pérez
, Peter W. Rose
:
Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks. PLoS Comput. Biol. 15(7) (2019) - 2018
- [j3]Sara Brin Rosenthal
, Julia Len, Mikayla Webster, Aaron Gary, Amanda Birmingham, Kathleen M. Fisch
:
Interactive network visualization in Jupyter notebooks: visJS2jupyter. Bioinform. 34(1): 126-128 (2018) - [j2]Amanda Birmingham, Adam M. Mark, Carlo Mazzaferro, Guorong Xu, Kathleen M. Fisch
:
Efficient population-scale variant analysis and prioritization with VAPr. Bioinform. 34(16): 2843-2845 (2018) - [i1]Adam Rule, Amanda Birmingham, Cristal Zuñiga, Ilkay Altintas, Shih-Cheng Huang, Rob Knight, Niema Moshiri, Mai H. Nguyen, Sara Brin Rosenthal, Fernando Pérez, Peter W. Rose:
Ten Simple Rules for Reproducible Research in Jupyter Notebooks. CoRR abs/1810.08055 (2018) - 2010
- [j1]Phoenix Kwan, Amanda Birmingham:
NoiseMaker: simulated screens for statistical assessment. Bioinform. 26(19): 2484-2485 (2010)
2000 – 2009
- 2005
- [c1]Amanda Birmingham, Emily M. Anderson, William S. Marshall, Anastasia Khvorova:
Maximum Sequence Alignment Fails to Predict Off-targeted Gene Regulation by RNAi. CSB Workshops 2005: 233-234
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