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Don Kulasiri
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2020 – today
- 2024
- [j16]Sarawoot Somin, Don Kulasiri, Sandhya Samarasinghe:
On electrostatic interactions of adenosine triphosphate-insulin-degrading enzyme revealed by quantum mechanics/molecular mechanics and molecular dynamics. Quant. Biol. 12(4): 414-432 (2024) - 2023
- [j15]Mohammad Abdallah Alsharaiah, Sandhya Samarasinghe, Don Kulasiri:
Proteins as fuzzy controllers: Auto tuning a biological fuzzy inference system to predict protein dynamics in complex biological networks. Biosyst. 224: 104826 (2023) - 2022
- [b2]Don Kulasiri, Jingyi Liang:
Alzheimer's Disease - Biology, Biophysics and Computational Models. WorldScientific 2022, ISBN 9781800610118, pp. 1-416 - [j14]Leshi Chen, Don Kulasiri, Sandhya Samarasinghe:
Fundamental Boolean network modelling for childhood acute lymphoblastic leukaemia pathways. Quant. Biol. 10(1): 94 (2022) - 2021
- [j13]Mutaz Khazaaleh, Sandhya Samarasinghe, Don Kulasiri:
A new hierarchical approach to multi-level model abstraction for simplifying ODE models of biological networks and a case study: The G1/S Checkpoint/DNA damage signalling pathways of mammalian cell cycle. Biosyst. 203: 104374 (2021) - 2020
- [j12]Rahul Kosarwal, Don Kulasiri, Sandhya Samarasinghe:
Novel domain expansion methods to improve the computational efficiency of the Chemical Master Equation solution for large biological networks. BMC Bioinform. 21(1): 515 (2020)
2010 – 2019
- 2017
- [b1]Don Kulasiri, Yao He:
Computational Systems Biology of Synaptic Plasticity - Modelling of Biochemical Pathways Related to Memory Formation and Impairment. Series on Advances in Bioinformatics and Computational Biology 10, WorldScientific 2017, ISBN 9781786343376, pp. 1-364 - 2016
- [c2]Sandhya Samarasinghe, Manishi Kohli, Don Kulasiri:
Neural Networks for Robotic Detection of Mastitis in Dairy Cows: Netherlands and New Zealand Perspectives. IntelliSys (2) 2016: 989-996 - 2015
- [j11]Jingyi Liang, Don Kulasiri, Sandhya Samarasinghe:
Ca2+ dysregulation in the endoplasmic reticulum related to Alzheimer's disease: A review on experimental progress and computational modeling. Biosyst. 134: 1-15 (2015) - 2014
- [j10]Y. He, Don Kulasiri, Sandhya Samarasinghe:
Systems biology of synaptic plasticity: A review on N-methyl-d-aspartate receptor mediated biochemical pathways and related mathematical models. Biosyst. 122: 7-18 (2014) - [j9]Champi Thusangi Wannige, Don Kulasiri, Sandhya Samarasinghe:
The meiotic-mitotic initiation switch in budding yeast maintains its function robustly against sensitive parameter perturbations. Biosyst. 124: 61-74 (2014) - [j8]Nicoline Y. den Breems, Lan K. Nguyen, Don Kulasiri:
Integrated signaling pathway and gene expression regulatory model to dissect dynamics of Escherichia coli challenged mammary epithelial cells. Biosyst. 126: 27-40 (2014) - 2013
- [j7]Hong Ling, Sandhya Samarasinghe, Don Kulasiri:
Computational experiments reveal the efficacy of targeting CDK2 and CKIs for significantly lowering cellular senescence bar for potential cancer treatment. Biosyst. 111(2): 71-82 (2013) - [j6]Hong Ling, Sandhya Samarasinghe, Don Kulasiri:
Novel recurrent neural network for modelling biological networks: Oscillatory p53 interaction dynamics. Biosyst. 114(3): 191-205 (2013) - 2011
- [j5]Don Kulasiri, Y. He, Sandhya Samarasinghe:
Robustness of circadian rhythms in the presence of molecular fluctuations: An investigation based on a mechanistic, statistical theory and a simulation algorithm. Biosyst. 106(1): 57-66 (2011) - 2010
- [j4]Hong Ling, Don Kulasiri, Sandhya Samarasinghe:
Robustness of G1/S checkpoint pathways in cell cycle regulation based on probability of DNA-damaged cells passing as healthy cells. Biosyst. 101(3): 213-221 (2010)
2000 – 2009
- 2009
- [j3]Lan K. Nguyen, Don Kulasiri:
On the functional diversity of dynamical behaviour in genetic and metabolic feedback systems. BMC Syst. Biol. 3: 51 (2009) - 2008
- [j2]Lan K. Nguyen, Don Kulasiri:
On Multiple Regulatory Mechanisms in the Tryptophan Operon System in Escherichia coli: In silico Study of Perturbation Dynamics. Silico Biol. 8(5-6): 485-510 (2008)
1990 – 1999
- 1995
- [c1]Ramesh K. Rayudu, Sandhya Samarasinghe, Don Kulasiri:
A Comparison of Model-based Reasoning and Learning Approaches to Power Transmission Fault Diagnosis. ANNES 1995: 218-222 - 1994
- [j1]T. N. Brown, Don Kulasiri:
Simulation of Pinus Radiata Root System Structure for Ecosystem Management Applications. Simul. 62(5): 286-294 (1994)
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