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2020 – today
- 2023
- [j33]William Van Woensel, Samson W. Tu, Wojtek Michalowski, Syed Sibte Raza Abidi
, Samina Abidi, José Ramón Alonso, Alessio Bottrighi, Marc Carrier, Ruth Edry, Irit Hochberg, Malvika Rao, Stephen P. Kingwell, Alexandra Kogan, Mar Marcos
, Begoña Martínez-Salvador, Martin Michalowski
, Luca Piovesan, David Riaño, Paolo Terenziani, Szymon Wilk, Mor Peleg:
A community-of-practice-based evaluation methodology for knowledge intensive computational methods and its application to multimorbidity decision support. J. Biomed. Informatics 142: 104395 (2023) - 2022
- [c112]Alexandra Kogan
, Mor Peleg
, Samson W. Tu
, Raviv Allon
, Natanel Khaitov
, Irit Hochberg
:
A Goal-Oriented Methodology for Treatment of Patients with Multimorbidity - Goal Comorbidities (GoCom) Proof-of-Concept Demonstration. AIME 2022: 426-430 - [c111]Alexandra Kogan, Mor Peleg, Samson W. Tu:
Extending FHIR Timing Representation for Expressing Monitoring Recommendations. AMIA 2022 - [c110]Samson W. Tu, Tanya Podchiyska, Connie Oshiro, Susana B. Martins, Michael Ashcraft, Justin G. Chambers, Amy Robinson, Paul Heidenreich, Mary K. Goldstein:
Structural Patterns in Chronic Disease Clinical Practice Guidelines Formalized for Clinical Decision Support. AMIA 2022 - 2021
- [c109]Dympna O'Sullivan, William Van Woensel, Szymon Wilk, Samson W. Tu, Wojtek Michalowski, Samina Abidi, Marc Carrier, Ruth Edry, Irit Hochberg, Stephen P. Kingwell, Alexandra Kogan, Martin Michalowski, Hugh O'Sullivan, Mor Peleg:
Towards a framework for comparing functionalities of multimorbidity clinical decision support: A literature-based feature set and benchmark cases. AMIA 2021 - 2020
- [j32]Alexandra Kogan, Mor Peleg
, Samson W. Tu, Raviv Allon, Natanel Khaitov
, Irit Hochberg
:
Towards a goal-oriented methodology for clinical-guideline-based management recommendations for patients with multimorbidity: GoCom and its preliminary evaluation. J. Biomed. Informatics 112: 103587 (2020) - [c108]Alexandra Kogan, Mor Peleg, Samson W. Tu, Irit Hochberg, Natanel Khaitov, Raviv Allon:
GoCom - A Goal-oriented Methodology for Treatment of Patients with Multimorbidity and Its Preliminary Evaluation. AMIA 2020 - [c107]Samson W. Tu, Csongor Nyulas, Tania Tudorache, Mark A. Musen, Andrea Martinuzzi, Coen H. van Gool, Vincenzo Della Mea, Christopher G. Chute, Lucilla Frattura, Nicholas R. Hardiker, Huib ten Napel, Richard Madden, Ann-Helene Almborg, Jeewani Anupama Ginige, Catherine Sykes, Can Çelik, Robert Jakob:
Toward a Harmonized WHO Family of International Classifications Content Model. AMIA 2020 - [c106]Samson W. Tu, Csongor I. Nyulas, Tania Tudorache, Mark A. Musen
, Andrea Martinuzzi
, Coen H. van Gool
, Vincenzo Della Mea
, Christopher G. Chute, Lucilla Frattura, Nick Hardiker, Huib ten Napel, Richard Madden, Ann-Helene Almborg, Jeewani Anupama Ginige, Catherine Sykes, Can Celik, Robert Jakob
:
Toward a Harmonized WHO Family of International Classifications Content Model. MIE 2020: 1409-1410
2010 – 2019
- 2019
- [c105]Mor Peleg
, Alexandra Kogan
, Samson W. Tu:
A Method for Goal-Oriented Guideline Modeling in PROforma and Its Preliminary Evaluation. KR4HC/ProHealth/TEAAM@AIME 2019: 17-28 - [c104]Alexandra Kogan, Mor Peleg, Samson W. Tu:
Detecting and mitigating clinical guideline interactions in multimorbidity patients using computer-interpretable guidelines and AEOLUS. AMIA 2019 - 2018
- [c103]Alexandra Kogan, Samson W. Tu, Mor Peleg:
Goal-driven management of interacting clinical guidelines for multi-morbidity patients. AMIA 2018 - [c102]Omar A. Usman, Connie Oshiro, Justin G. Chambers, Samson W. Tu, Susana B. Martins, Amy Robinson, Mary K. Goldstein:
Selecting Test Cases from the Electronic Health Record for Software Testing of Knowledge-Based Clinical Decision Support Systems. AMIA 2018 - 2017
- [j31]Rafael S. Gonçalves
, Samson W. Tu, Csongor I. Nyulas, Michael J. Tierney, Mark A. Musen
:
An ontology-driven tool for structured data acquisition using Web forms. J. Biomed. Semant. 8(1): 26:1-26:14 (2017) - [j30]Yun Lou, Samson W. Tu, Csongor Nyulas, Tania Tudorache, Robert J. G. Chalmers, Mark A. Musen
:
Use of ontology structure and Bayesian models to aid the crowdsourcing of ICD-11 sanctioning rules. J. Biomed. Informatics 68: 20-34 (2017) - [c101]Geoffrey J. Tso, Samson W. Tu, Mark A. Musen, Mary K. Goldstein:
High-Risk Drug-Drug Interactions Between Clinical Practice Guidelines for Management of Chronic Conditions. CRI 2017 - 2016
- [c100]Geoffrey J. Tso, Samson W. Tu, Connie Oshiro, Susana B. Martins, Michael Ashcraft, Kaeli Yuen, Dan Y. Wang, Amy Robinson, Paul Heidenreich, Mary K. Goldstein:
Automating Guidelines for Clinical Decision Support: Knowledge Engineering and Implementation. AMIA 2016 - [c99]Samson W. Tu, Susana B. Martins, Connie Oshiro, Kaeli Yuen, Dan Y. Wang, Amy Robinson, Michael Ashcraft, Paul Heidenreich, Mary K. Goldstein:
Automating Performance Measures and Clinical Practice Guidelines: Differences and Complementarities. AMIA 2016 - [c98]Geoffrey J. Tso, Kaeli Yuen, Susana B. Martins, Samson W. Tu, Michael Ashcraft, Paul Heidenreich, Brian B. Hoffman, Mary K. Goldstein:
Test Case Selection in Pre-Deployment Testing of Complex Clinical Decision Support Systems. CRI 2016 - 2015
- [j29]Christopher Ochs, Yehoshua Perl, James Geller, Melissa A. Haendel, Matthew H. Brush
, Sivaram Arabandi
, Samson W. Tu:
Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network. J. Biomed. Informatics 56: 127-144 (2015) - [c97]Mary K. Goldstein, Samson W. Tu, Connie Oshiro, Susana B. Martins, Dan Y. Wang, Amy Furman, Michael Ashcraft, Jonathan Mendoza, Paul Heidenreich:
Automating Guidelines for Clinical Decision Support (CDS): A Categorization of Knowledge Engineering and Implementation Decisions. AMIA 2015 - [c96]Samson W. Tu, Csongor Nyulas, Tania Tudorache, Mark A. Musen:
A Method to Compare ICF and SNOMED CT for Coverage of U.S. Social Security Administration's Disability Listing Criteria. AMIA 2015 - [c95]Samson W. Tu, Kaeli Yuen, Connie Oshiro, Susana B. Martins, Ignacio Valdes, George O. Welch, Paul Heidenreich, Mary K. Goldstein:
Integrating an Externally Developed Clinical Decision Support (CDS) System with an Existing Electronic Health Record (EHR) System at VA. AMIA 2015 - [c94]Donna M. Zulman, Susana B. Martins, Yan Liu, Samson W. Tu, Brian B. Hoffman, Steven M. Asch, Mary K. Goldstein:
Using a Clinical Knowledge Base to Assess Comorbidity Interrelatedness Among Patients with Multiple Chronic Conditions. AMIA 2015 - [c93]Rafael S. Gonçalves, Csongor I. Nyulas, Samson W. Tu, Mark A. Musen:
OWL-based form generation and structured data acquisition. ICBO 2015 - [c92]Rafael S. Gonçalves, Samson W. Tu, Csongor I. Nyulas, Michael J. Tierney, Mark A. Musen:
Structured data acquisition with ontology-based web forms. ICBO 2015 - [c91]Csongor I. Nyulas, Samson W. Tu, Tania Tudorache, Mark A. Musen:
Modeling and tools for supporting post-coordination in ICD-11. ICBO 2015 - 2014
- [j28]Ida Sim, Samson W. Tu, Simona Carini, Harold P. Lehmann
, Brad H. Pollock, Mor Peleg
, Knut M. Wittkowski:
The Ontology of Clinical Research (OCRe): An informatics foundation for the science of clinical research. J. Biomed. Informatics 52: 78-91 (2014) - [c90]Mary K. Goldstein, Samson W. Tu, Susana B. Martins, Connie Oshiro, Kaeli Yuen, Tammy S. Hwang, Dan Y. Wang, Amy Furman, Michael Ashcraft, Paul Heidenreich:
Automating Performance Measures and Clinical Practice Guidelines: Differences and Complementarities. AMIA 2014 - [c89]Tammy S. Hwang, Susana B. Martins, Samson W. Tu, Dan Y. Wang, Paul Heidenreich, Mary K. Goldstein:
Encoding Performance Measures For Automated Quality Assessment. AMIA 2014 - [c88]Vincent Lou, Samson W. Tu, Csongor Nyulas, Tania Tudorache, Robert J. G. Chalmers, Mark A. Musen:
Crowdsourcing ICD-11 Sanctioning Rules. AMIA 2014 - 2013
- [c87]Susana B. Martins, Samson W. Tu, Richard Martinello, Michael Rubin, Philip Foulis, Stephen Luther, Tyler Forbush, Matthew Scotch, Brad Doebbelling, Mary K. Goldstein:
Creating a MRSA Ontology to Support Categorization of MRSA Infections. AMIA 2013 - 2012
- [c86]Joshua Goldner, Samson W. Tu, Mary K. Goldstein, Susana B. Martins, Pamela Kum, Csongor Nyulas, Mark A. Musen:
Application of Preference-Oriented Decision Making to Multimorbidity for Computerized Decision Support: Decision Analysis and Analytic Hierarchy. AMIA 2012 - [c85]Peter J. Haug, Nathan C. Hulse, David Yauch, Emory Fry, Samson W. Tu, Mary K. Goldstein, Pamela Kum, Robert A. Greenes:
The Implementer's Workbench: Incorporating Site-Specific Factors into Clinical Decision Support Rules Using an ArdenML Framework. AMIA 2012 - [c84]Christopher Ochs, Ankur Agrawal, Yehoshua Perl, Michael Halper, Samson W. Tu, Simona Carini, Ida Sim, Natalya Fridman Noy, Mark A. Musen, James Geller:
Deriving an Abstraction Network to Support Quality Assurance in OCRe. AMIA 2012 - [c83]Ida Sim, Simona Carini, Samson W. Tu, Landon Detwiler, James F. Brinkley, Shamin Mollah, Karl Burke, Harold P. Lehmann, Swati Chakraborty, Knut M. Wittkowski, Brad Pollock, Thomas Johnson, Vojtech Huser:
Ontology-Based Federated Data Access to Human Studies Information. AMIA 2012 - [c82]David Yauch, Pamela Kum, Samson W. Tu, Peter J. Haug, Nathan C. Hulse, Emory Fry, Robert A. Greenes, Mary K. Goldstein:
Development of a Taxonomy of Setting-Specific Factors for Adaptation of Clinical Decision Support Rules. AMIA 2012 - [c81]Csongor Nyulas, Tania Tudorache, Samson W. Tu:
The Template Instance Pattern. WOP 2012 - [c80]Csongor Nyulas, Tania Tudorache, Samson W. Tu, Mark A. Musen:
Experiences with Multilingual Modeling in the Development of the International Classification of Traditional Medicine Ontology. MSW 2012 - 2011
- [j27]Samson W. Tu, Mor Peleg
, Simona Carini, Michael Bobak
, Jessica Ross, Daniel L. Rubin, Ida Sim:
A practical method for transforming free-text eligibility criteria into computable criteria. J. Biomed. Informatics 44(2): 239-250 (2011) - [c79]Mor Peleg
, Samson W. Tu, Giorgio Leonardi, Silvana Quaglini, Paola Russo, Giovanni Palladini, Giampaolo Merlini:
Reasoning with Effects of Clinical Guideline Actions Using OWL: AL Amyloidosis as a Case Study. KR4HC 2011: 65-79 - [c78]Amanda Richards, Martin J. O'Connor, Susana B. Martins, Michael Uehara-Bingen, Samson W. Tu, Amar K. Das:
Web-Based Querying and Temporal Visualization of Longitudinal Clinical Data. AIME 2011: 260-264 - [c77]Martin J. O'Connor, Amanda Richards, Susana B. Martins, Mike Bingen, Samson W. Tu, Amar K. Das:
SWEETInfo: a Web-Based System for Visualizing and Querying Temporal Data. RuleML America (2) 2011 - [c76]Martin J. O'Connor, Mike Bingen, Amanda Richards, Samson W. Tu, Amar K. Das:
Web-based Exploration of Temporal Data in Biomedicine. WEBIST 2011: 352-359 - 2010
- [j26]Chunhua Weng
, Samson W. Tu, Ida Sim, Rachel L. Richesson:
Formal representation of eligibility criteria: A literature review. J. Biomed. Informatics 43(3): 451-467 (2010) - [c75]Samson W. Tu, Mark A. Musen
:
A Typology for Modeling Processes in Clinical Guidelines and Protocols. SUComS 2010: 545-553
2000 – 2009
- 2009
- [j25]Martin J. O'Connor, Csongor Nyulas, Samson W. Tu, David L. Buckeridge, Anna Okhmatovskaia, Mark A. Musen
:
Software-engineering challenges of building and deploying reusable problem solvers. Artif. Intell. Eng. Des. Anal. Manuf. 23(4): 339-356 (2009) - [j24]Mor Peleg
, Samson W. Tu:
Design patterns for clinical guidelines. Artif. Intell. Medicine 47(1): 1-24 (2009) - [c74]Masoumeh T. Izadi, David L. Buckeridge, Anna Okhmatovskaia, Samson W. Tu, Martin J. O'Connor, Csongor Nyulas, Mark A. Musen:
A Bayesian Network Model for Analysis of Detection Performance in Surveillance Systems. AMIA 2009 - [c73]Wei-Nchih Lee, Samson W. Tu, Amar K. Das:
Extracting Cancer Quality Indicators from Electronic Medical Records: Evaluation of an Ontology-Based Virtual Medical Record Approach. AMIA 2009 - [c72]Lynn Young, Samson W. Tu, Lakshika Tennakoon, David Vismer, Vadim Astakhov, Amarnath Gupta, Jeffrey S. Grethe
, Maryann E. Martone, Amar K. Das, Matthew J. McAuliffe:
Ontology driven data integration for autism research. CBMS 2009: 1-7 - 2008
- [j23]David L. Buckeridge, Anna Okhmatovskaia, Samson W. Tu, Martin J. O'Connor, Csongor Nyulas, Mark A. Musen
:
Model Formulation: Understanding Detection Performance in Public Health Surveillance: Modeling Aberrancy-detection Algorithms. J. Am. Medical Informatics Assoc. 15(6): 760-769 (2008) - [c71]Martin J. O'Connor, Ravi D. Shankar, Csongor Nyulas, Samson W. Tu, Amar K. Das:
Developing a Web-Based Application using OWL and SWRL. AAAI Spring Symposium: AI Meets Business Rules and Process Management 2008: 93-98 - [c70]David L. Buckeridge, Anna Okhmatovskaia, Samson W. Tu, Martin J. O'Connor, Csongor Nyulas, Mark A. Musen:
Predicting Outbreak Detection in Public Health Surveillance: Quantitative Analysis to Enable Evidence-Based Method Selection. AMIA 2008 - [c69]Samson W. Tu, Lakshika Tennakoon, Martin J. O'Connor, Ravi D. Shankar, Amar K. Das:
Using an Integrated Ontology and Information Model for Querying and Reasoning about Phenotypes: The Case of Autism. AMIA 2008 - [c68]Csongor Nyulas, Martin J. O'Connor, Samson W. Tu, David L. Buckeridge, Anna Okhmatovskaia, Mark A. Musen
:
An Ontology-Driven Framework for Deploying JADE Agent Systems. IAT 2008: 573-577 - [c67]Tania Tudorache, Natalya Fridman Noy, Samson W. Tu, Mark A. Musen:
Supporting Collaborative Ontology Development in Protégé. ISWC 2008: 17-32 - 2007
- [j22]Samson W. Tu, James R. Campbell, Julie Glasgow, Mark A. Nyman, Robert C. McClure, James C. McClay, Craig G. Parker, Karen M. Hrabak, David Berg, Tony Weida, James G. Mansfield, Mark A. Musen
, Robert M. Abarbanel:
Synthesis of Research Paper: The SAGE Guideline Model: Achievements and Overview. J. Am. Medical Informatics Assoc. 14(5): 589-598 (2007) - [c66]David Riaño
, Joan Albert López-Vallverdú, Samson W. Tu:
Mining Hospital Data to Learn SDA* Clinical Algorithms. K4CARE 2007: 46-61 - [c65]Martin J. O'Connor, Ravi D. Shankar, Samson W. Tu, Csongor Nyulas, Dave Parrish, Mark A. Musen, Amar K. Das:
Using Semantic Web Technologies for Knowledge-Driven Querying of Biomedical Data. AIME 2007: 267-276 - [c64]Samson W. Tu, Shantha Condamoor, Tim Mather, Richard W. Hall, Neill Jones, Mark A. Musen:
Document-Oriented Views of Guideline Knowledge Bases. AIME 2007: 431-440 - [c63]Samson W. Tu:
Guideline Models, Process Specification, and Workflow. Business Process Management Workshops 2007: 322 - [c62]Karen M. Hrabak, James R. Campbell, Samson W. Tu, Robert C. McClure, Robert Weida:
Creating Interoperable Guidelines: Requirements of Vocabulary Standards in Immunization Decision Support. MedInfo 2007: 930-934 - [c61]Martin J. O'Connor, Ravi D. Shankar, Samson W. Tu, Csongor Nyulas, Amar K. Das, Mark A. Musen:
Efficiently Querying Relational Databases Using OWL and SWRL. RR 2007: 361-363 - [c60]Martin J. O'Connor, Samson W. Tu, Csongor Nyulas, Amar K. Das, Mark A. Musen:
Querying the Semantic Web with SWRL. RuleML 2007: 155-159 - 2006
- [c59]Ravi D. Shankar, Samson W. Tu, Mark A. Musen:
Medical Arguments in an Automated Health Care System. AAAI Spring Symposium: Argumentation for Consumers of Healthcare 2006: 96-104 - [c58]Robert M. Abarbanel, David Berg, James R. Campbell, Julie Glasgow, Karen M. Hrabak, James G. Mansfield, James C. McClay, Robert C. McClure, Mark A. Nyman, Craig G. Parker, Sidna M. Scheitel, Samson W. Tu, Tony Weida:
Partnerships in Innovation: How We Accomplished the Objectives of the SAGE Project. AMIA 2006 - [c57]Susana B. Martins, Steve Lai, Samson W. Tu, Ravi D. Shankar, S. N. Hastings, Brian B. Hoffman, Naja DiPilla, Mary K. Goldstein:
Offline Testing of the ATHENA Hypertension Decision Support System Knowledge Base to Improve the Accuracy of Recommendations. AMIA 2006 - [c56]James C. McClay, James R. Campbell, Craig G. Parker, Karen M. Hrabak, Samson W. Tu, Robert M. Abarbanel:
Structuring Order Sets for Interoperable Distribution. AMIA 2006 - [c55]Samson W. Tu, Karen M. Hrabak, James R. Campbell, Julie Glasgow, Mark A. Nyman, Robert C. McClure, James C. McClay, Robert M. Abarbanel, James G. Mansfield, Susana B. Martins, Mary K. Goldstein, Mark A. Musen:
Use of Declarative Statements in Creating and Maintaining Computer-Interpretable Knowledge Bases for Guideline-Based Care. AMIA 2006 - 2005
- [j21]Ameen Abu-Hanna
, Ronald Cornet
, Nicolette de Keizer, Monica Crubézy
, Samson W. Tu:
protégé as a vehicle for developing medical terminological systems. Int. J. Hum. Comput. Stud. 62(5): 639-663 (2005) - [c54]Henrik Eriksson, Samson W. Tu, Mark A. Musen:
Semantic Clinical Guideline Documents. AMIA 2005 - [c53]Martin J. O'Connor, Holger Knublauch, Samson W. Tu, Benjamin N. Grosof, Mike Dean, William E. Grosso, Mark A. Musen
:
Supporting Rule System Interoperability on the Semantic Web with SWRL. ISWC 2005: 974-986 - 2004
- [j20]Mor Peleg
, Aziz A. Boxwala
, Samson W. Tu, Qing T. Zeng, Omolola Ogunyemi
, Dongwen Wang, Vimla L. Patel, Robert A. Greenes, Edward H. Shortliffe
:
Review Paper: The InterMed Approach to Sharable Computer-interpretable Guidelines: A Review. J. Am. Medical Informatics Assoc. 11(1): 1-10 (2004) - [j19]Mary K. Goldstein, Robert W. Coleman, Samson W. Tu, Ravi D. Shankar, Martin J. O'Connor, Mark A. Musen
, Susana B. Martins, Philip W. Lavori, Michael G. Shlipak, Eugene Oddone, Aneel A. Advani, Parisa Gholami, Brian B. Hoffman:
Application of Information Technology: Translating Research into Practice: Organizational Issues in Implementing Automated Decision Support for Hypertension in Three Medical Centers. J. Am. Medical Informatics Assoc. 11(5): 368-376 (2004) - [j18]Aziz A. Boxwala
, Mor Peleg
, Samson W. Tu, Omolola Ogunyemi
, Qing T. Zeng, Dongwen Wang, Vimla L. Patel, Robert A. Greenes, Edward H. Shortliffe
:
GLIF3: a representation format for sharable computer-interpretable clinical practice guidelines. J. Biomed. Informatics 37(3): 147-161 (2004) - [j17]Dongwen Wang, Mor Peleg
, Samson W. Tu, Aziz A. Boxwala
, Omolola Ogunyemi
, Qing T. Zeng, Robert A. Greenes, Vimla L. Patel, Edward H. Shortliffe
:
Design and implementation of the GLIF3 guideline execution engine. J. Biomed. Informatics 37(5): 305-318 (2004) - [c52]Samson W. Tu, James R. Campbell, Mark A. Musen
:
The SAGE Guideline Modeling: Motivation and Methodology. CGP 2004: 167-171 - [c51]Mor Peleg
, Samson W. Tu, Abhijit Manindroo, Russ B. Altman:
Modeling and Analyzing Biomedical Processes using Workflow/Petri Net Models and Tools. MedInfo 2004: 74-78 - [c50]Craig G. Parker, Roberto A. Rocha, James R. Campbell, Samson W. Tu, Stanley M. Huff:
Detailed Clinical Models for Sharable, Executable Guidelines. MedInfo 2004: 145-148 - [c49]Samson W. Tu, Mark A. Musen
, Ravi D. Shankar, James R. Campbell, Karen M. Hrabak, James C. McClay, Stanley M. Huff, Robert C. McClure, Craig G. Parker, Roberto A. Rocha, Robert M. Abarbanel, Nick Beard, Julie Glasgow, Guy Mansfield, Prabhu Ram, Qin Ye, Eric Mays, Tony Weida, Christopher G. Chute, Kevin McDonald, David N. Mohr, Mark A. Nyman, Sidna M. Scheitel, Harold Solbrig, David A. Zill, Mary K. Goldstein:
Modeling Guidelines for Integration into Clinical Workflow. MedInfo 2004: 174-178 - [c48]Prabhu Ram, David Berg, Samson W. Tu, Guy Mansfield, Qin Ye, Robert M. Abarbanel, Nick Beard:
Executing Clinical Practice Guidelines using the SAGE Execution Engine. MedInfo 2004: 251-255 - [e1]Katharina Kaiser, Silvia Miksch, Samson W. Tu:
Computer-based Support for Clinical Guidelines and Protocols - Proceedings of the Symposium on Computerized Guidelines and Protocols, CGP 2004, Prague, Czech Republic, 12-14 April, 2004. Studies in Health Technology and Informatics 101, IOS Press 2004, ISBN 978-1-58603-412-2 [contents] - 2003
- [j16]John H. Gennari
, Mark A. Musen
, Ray W. Fergerson, William E. Grosso, Monica Crubézy
, Henrik Eriksson, Natalya Fridman Noy, Samson W. Tu:
The evolution of Protégé: an environment for knowledge-based systems development. Int. J. Hum. Comput. Stud. 58(1): 89-123 (2003) - [j15]Mor Peleg
, Samson W. Tu, Jonathan Bury, Paolo Ciccarese, John Fox, Robert A. Greenes, Richard W. Hall, Peter D. Johnson, Neill Jones, Anand Kumar, Silvia Miksch, Silvana Quaglini, Andreas Seyfang, Edward H. Shortliffe
, Mario Stefanelli:
Research Paper: Comparing Computer-interpretable Guideline Models: A Case-study Approach. J. Am. Medical Informatics Assoc. 10(1): 52-68 (2003) - [c47]Natalya Fridman Noy, Monica Crubézy, Ray W. Fergerson, Holger Knublauch, Samson W. Tu, Jennifer Vendetti, Mark A. Musen:
Protégé-2000: An Open-Source Ontology-Development and Knowledge-Acquisition Environment: AMIA 2003 Open Source Expo. AMIA 2003 - [c46]Ravi D. Shankar, Samson W. Tu, Mark A. Musen:
A Knowledge-Acquisition Wizard to Encode Guidelines. AMIA 2003 - [c45]Samson W. Tu, James R. Campbell, Mark A. Musen:
The Structure of Guideline Recommendations: A Synthesis. AMIA 2003 - [c44]Dongwen Wang, Mor Peleg, Davis Bu, Michael N. Cantor, Giora Landesberg, Eitan Lunenfeld, Samson W. Tu, Gail E. Kaiser, George Hripcsak, Vimla L. Patel, Edward H. Shortliffe:
GESDOR - A Generic Execution Model for Sharing of Computer-Interpretable Clinical Practice Guidelines. AMIA 2003 - 2002
- [j14]Dongwen Wang, Mor Peleg
, Samson W. Tu, Aziz A. Boxwala
, Robert A. Greenes, Vimla L. Patel, Edward H. Shortliffe
:
Representation primitives, process models and patient data in computer-interpretable clinical practice guidelines: : A literature review of guideline representation models. Int. J. Medical Informatics 68(1-3): 59-70 (2002) - [j13]Mary K. Goldstein, Brian B. Hoffman, Robert W. Coleman, Samson W. Tu, Ravi D. Shankar, Martin J. O'Connor, Susana B. Martins, Aneel A. Advani, Mark A. Musen
:
Patient Safety in Guideline-Based Decision Support for Hypertension Management: ATHENA DSS. J. Am. Medical Informatics Assoc. 9(Supplement): 11-16 (2002) - [c43]Elisabeth Bayegan, Samson W. Tu:
The helpful patient record system: problem oriented and knowledge based. AMIA 2002 - [c42]Nick Beard, James R. Campbell, Stanley M. Huff, Mauricio Leon, James G. Mansfield, Eric Mays, James C. McClay, David N. Mohr, Mark A. Musen, David O'Brien, Roberto A. Rocha, Anne Saulovich, Sidna M. Scheitel, Samson W. Tu:
Standards-based Sharable Active Guideline Environment (SAGE): A Project to Develop a Universal Framework for Encoding and Disseminating Electronic Clinical Practice Guidelines. AMIA 2002 - [c41]David L. Buckeridge, Justin Graham, Martin J. O'Connor, Michael Choy, Samson W. Tu, Mark A. Musen:
Knowledge-based bioterrorism surveillance. AMIA 2002 - [c40]Martin J. O'Connor, Samson W. Tu, Mark A. Musen:
The Chronus II temporal database mediator. AMIA 2002 - [c39]Mor Peleg, Vimla L. Patel, Vincenza Snow, Samson W. Tu, Christel Mottur-Pilson, Edward H. Shortliffe, Robert A. Greenes:
Support for guideline development through error classification and constraint checking. AMIA 2002 - [c38]Ravi D. Shankar, Samson W. Tu, Mark A. Musen:
Use of Protégé-2000 to Encode Clinical Guidelines. AMIA 2002 - [c37]Samson W. Tu, Peter D. Johnson, Mark A. Musen:
A Typology for Modeling Processes in Clinical Guidelines and Protocols. AMIA 2002 - 2001
- [j12]Aziz A. Boxwala
, Samson W. Tu, Mor Peleg
, Qing T. Zeng, Omolola Ogunyemi
, Robert A. Greenes, Edward H. Shortliffe
, Vimla L. Patel:
Toward a Representation Format for Sharable Clinical Guidelines. J. Biomed. Informatics 34(3): 157-169 (2001) - [j11]Mor Peleg
, Aziz A. Boxwala
, Elmer V. Bernstam
, Samson W. Tu, Robert A. Greenes, Edward H. Shortliffe
:
Sharable Representation of Clinical Guidelines in GLIF: Relationship to the Arden Syntax. J. Biomed. Informatics 34(3): 170-181 (2001) - [c36]Alan L. Rector, Peter D. Johnson, Samson W. Tu, Chris Wroe, Jeremy Rogers:
Interface of Inference Models with Concept and Medical Record Models. AIME 2001: 314-323 - [c35]Elmer V. Bernstam, Nachman Ash, Mor Peleg, Samson W. Tu, Edward H. Shortliffe, Robert A. Greenes:
Preliminary Evaluation of a Guideline Classification System. AMIA 2001 - [c34]Mary K. Goldstein, Brian B. Hoffman, Robert W. Coleman, Samson W. Tu, Ravi D. Shankar, Martin J. O'Connor, Susana B. Martins, Aneel A. Advani, Mark A. Musen:
Patient safety in guideline-based decision support for hypertension management: ATHENA DSS. AMIA 2001 - [c33]Peter D. Johnson, Samson W. Tu, Mark A. Musen, Ian N. Purves:
A virtual medical record for guideline-based decision support. AMIA 2001 - [c32]Martin J. O'Connor, Ravi D. Shankar, Samson W. Tu, Aneel A. Advani, Mary K. Goldstein, Robert W. Coleman, Mark A. Musen:
A Client-Server Framework for Deploying a Decision-support System in a Resource-constrained Environment. AMIA 2001 - [c31]Mor Peleg, Omolola Ogunyemi, Samson W. Tu, Aziz A. Boxwala, Qing T. Zeng, Robert A. Greenes, Edward H. Shortliffe:
Using features of Arden Syntax with object-oriented medical data models for guideline modeling. AMIA 2001 - [c30]Ravi D. Shankar, Samson W. Tu, Susana B. Martins, Lawrence M. Fagan, Mary K. Goldstein, Mark A. Musen:
Integration of textual guideline documents with formal guideline knowledge bases. AMIA 2001 - [c29]Peter D. Johnson, Samson W. Tu, Neill Jones:
Achieving Reuse of Computable Guideline Systems. MedInfo 2001: 99-103 - [c28]Robert A. Greenes, Mor Peleg
, Aziz A. Boxwala
, Samson W. Tu, Vimla L. Patel, Edward H. Shortliffe
:
Sharable Computer-based Clinical Practice Guidelines: Rationale, Obstacles, Approaches, and Prospects. MedInfo 2001: 201-205 - [c27]Mor Peleg
, Aziz A. Boxwala
, Samson W. Tu, Robert A. Greenes, Edward H. Shortliffe
, Vimla L. Patel:
Handling Expressiveness and Comprehensibility Requirements in GLIF3. MedInfo 2001: 241-245 - [c26]Samson W. Tu, Mark A. Musen
:
Modeling Data and Knowledge in the EON Guideline Architecture. MedInfo 2001: 280-284 - [c25]Dongwen Wang, Mor Peleg
, Samson W. Tu, Edward H. Shortliffe
, Robert A. Greenes:
Representation of Clinical Practice Guidelines for Computer-Based Implementations. MedInfo 2001: 285-289 - [c24]Martin J. O'Connor, William E. Grosso, Samson W. Tu, Mark A. Musen
:
RASTA: A Distributed Temporal Abstraction System to Facilitate Knowledge-Driven Monitoring of Clinical Databases. MedInfo 2001: 508-512 - [c23]Ravi D. Shankar, Susana B. Martins, Samson W. Tu, Mary K. Goldstein, Mark A. Musen
:
Building an Explanation Function for a Hypertension Decision-Support System. MedInfo 2001: 538-542 - 2000
- [c22]Elmer V. Bernstam, Nachman Ash, Mor Peleg, Samson W. Tu, Aziz A. Boxwala, Peter Mork, Edward H. Shortliffe, Robert A. Greenes:
Guideline classification to assist modeling, authoring, implementation and retrieval. AMIA 2000 - [c21]Mary K. Goldstein, Brian B. Hoffman, Robert W. Coleman, Mark A. Musen, Samson W. Tu, Aneel A. Advani, Ravi D. Shankar, Martin J. O'Connor:
Implementing clinical practice guidelines while taking account of changing evidence: ATHENA DSS, an easily modifiable decision-support system for managing hypertension in primary care. AMIA 2000 - [c20]Peter D. Johnson, Samson W. Tu, Nick Booth, Bob Sugden, Ian N. Purves:
Using scenarios in chronic disease management guidelines for primary care. AMIA 2000 - [c19]Zhen Lin, Samson W. Tu, Mark A. Musen:
Representation of Nursing Guidelines Using the EON Guideline Model. AMIA 2000 - [c18]Martin J. O'Connor, Samson W. Tu, Mark A. Musen:
Representation of temporal indeterminacy in clinical databases. AMIA 2000 - [c17]Mor Peleg, Aziz A. Boxwala, Omolola Ogunyemi, Qing T. Zeng, Samson W. Tu, Ronilda Lacson, Elmer V. Bernstam, Nachman Ash, Peter Mork, Lucila Ohno-Machado, Edward H. Shortliffe, Robert A. Greenes:
GLIF3: the evolution of a guideline representation format. AMIA 2000 - [c16]Ravi D. Shankar, Samson W. Tu, Mary K. Goldstein, Mark A. Musen:
Explanations for a Hypertension Decision Support System. AMIA 2000 - [c15]Samson W. Tu, Mark A. Musen:
From guideline modeling to guideline execution: defining guideline-based decision-support services. AMIA 2000 - [c14]Qing T. Zeng, Samson W. Tu, Aziz A. Boxwala, Mor Peleg, Robert A. Greenes, Edward H. Shortliffe:
A Three-layer Domain Ontology for Guideline Representation and Sharing. AMIA 2000 - [c13]Samson W. Tu, Mark A. Musen
:
Representation Formalisms and Computational Methods for Modeling Guideline-Based Patient Care. EWGLP 2000: 115-132
1990 – 1999
- 1999
- [j10]John H. Nguyen, Yuval Shahar, Samson W. Tu, Amar K. Das, Mark A. Musen:
Integration of Temporal Reasoning and Temporal-Data Maintenance into a Reusable Database Mediator to Answer Abstract, Time-Oriented Queries: The Tzolkin System. J. Intell. Inf. Syst. 13(1-2): 121-145 (1999) - [c12]Aneel A. Advani, Samson W. Tu, Martin J. O'Connor, Robert W. Coleman, Mary K. Goldstein, Mark A. Musen:
Integrating a modern knowledge-based system architecture with a legacy VA database: the ATHENA and EON projects at Stanford. AMIA 1999 - [c11]Mark A. Musen, Samson W. Tu, Ravi D. Shankar, Martin J. O'Connor, Aneel A. Advani:
EON 2.0: Enhanced Middleware for Automation of Protocol-Directed Therapy. AMIA 1999 - [c10]Martin J. O'Connor, Samson W. Tu, Mark A. Musen:
Applying temporal joins to clinical databases. AMIA 1999 - [c9]Bob Sugden, Ian N. Purves, Nick Booth, Peter D. Johnson, Samson W. Tu:
The PRODIGY Knowledge Architecture Requirements for Chronic Disease Management in Primary Care. AMIA 1999 - [c8]Samson W. Tu, Mark A. Musen:
A flexible approach to guideline modeling. AMIA 1999 - 1998
- [j9]Samson W. Tu, Mark A. Musen
:
Episodic refinement of episodic skeletal-plan refinement. Int. J. Hum. Comput. Stud. 48(4): 475-497 (1998) - [j8]Lucila Ohno-Machado, John H. Gennari, Shawn N. Murphy, Nilesh L. Jain, Samson W. Tu, Diane E. Oliver, Edward Pattison-Gordon, Robert A. Greenes, Edward H. Shortliffe
, G. Octo Barnett:
Research Paper: The GuideLine Interchange Format: A Model for Representing Guidelines. J. Am. Medical Informatics Assoc. 5(4): 357-372 (1998) - [c7]Ravi D. Shankar, Samson W. Tu, Mark A. Musen:
A declarative explanation framework that uses a collection of visualization agents. AMIA 1998 - 1997
- [c6]Aneel A. Advani, Samson W. Tu, Mark A. Musen:
Domain Modeling with Integrated Ontologies: Principles for Reconciliation and Reuse. AMIA 1997 - [c5]Mark A. Musen, Samson W. Tu, Aneel A. Advani, Amar K. Das, Zaki Hasan, John H. Nguyen, Yuval Shahar:
Theater-Style Demonstration: EON: CORBA-Based Middleware for Automation of Protocol-Directed Therapy. AMIA 1997 - [c4]John H. Nguyen, Yuval Shahar, Samson W. Tu, Amar K. Das, Mark A. Musen:
A temporal database mediator for protocol-based decision support. AMIA 1997 - 1996
- [j7]Thomas E. Rothenfluh, John H. Gennari, Henrik Eriksson, Angel R. Puerta, Samson W. Tu, Mark A. Musen:
Reusable ontologies, knowledge-acquisition tools, and performance systems: PROTÉGÉ-II solutions to Sisyphus-2. Int. J. Hum. Comput. Stud. 44(3-4): 303-332 (1996) - [j6]Mark A. Musen, Samson W. Tu, Amar K. Das, Yuval Shahar:
Synthesis of Research: EON: A Component-Based Approach to Automation of Protocol-Directed Therapy. J. Am. Medical Informatics Assoc. 3(6): 367-388 (1996) - 1995
- [j5]Henrik Eriksson, Yuval Shahar
, Samson W. Tu, Angel R. Puerta, Mark A. Musen
:
Task Modeling with Reusable Problem-Solving Methods. Artif. Intell. 79(2): 293-326 (1995) - [j4]Samson W. Tu, Henrik Eriksson, John H. Gennari
, Yuval Shahar
, Mark A. Musen
:
Ontology-based configuration of problem-solving methods and generation of knowledge-acquisition tools: application of PROTEGE-II to protocol-based decision support. Artif. Intell. Medicine 7(3): 257-289 (1995) - [c3]Mark A. Musen, Samson W. Tu, Amar K. Das, Yuval Shahar:
A Component-Based Architecture for Automation of Protocol-Directed Therapy. AIME 1995: 3-13 - 1994
- [j3]John H. Gennari
, Samson W. Tu, Thomas E. Rothenfluh, Mark A. Musen
:
Mapping domains to methods in support of reuse. Int. J. Hum. Comput. Stud. 41(3): 399-424 (1994) - 1993
- [j2]Angel R. Puerta, Samson W. Tu, Mark A. Musen
:
Modeling tasks with mechanisms. Int. J. Intell. Syst. 8(1): 129-152 (1993) - 1992
- [c2]Mark A. Musen, Samson W. Tu:
Problem-Solving Models for Generation of Task-Specific Knowledge-Acquisition Tools. AIFIPP 1992: 23-49
1980 – 1989
- 1989
- [j1]Samson W. Tu, Michael G. Kahn, Mark A. Musen
, Jay C. Ferguson, Edward H. Shortliffe, Lawrence M. Fagan:
Episodic Skeletal-Plan Refinement Based on Temporal Data. Commun. ACM 32(12): 1439-1455 (1989) - 1985
- [c1]Curtis P. Langlotz, Lawrence M. Fagan, Samson W. Tu, John Williams, Branimir Sikic:
ONYX: An Architecture for Planning in Uncertain Environments. IJCAI 1985: 447-449
Coauthor Index
aka: Csongor I. Nyulas
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