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ORCIDIshwor Thapa
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2020 – today
- 2024
[c20]Suyeon Kim, Ishwor Thapa, Hesham H. Ali:
A Robust Network Model for Studying Microbiomes in Precision Agriculture Applications. ICCS (6) 2024: 58-71- 2022
- [c19]Suyeon Kim, Ishwor Thapa, Hesham Ali:
A multi-omics graph database for data integration and knowledge extraction. BCB 2022: 56:1-56:6 - 2021
- [j6]Ishwor Thapa, Hesham Ali:
A Multiomics Graph Database System for Biological Data Integration and Cancer Informatics. J. Comput. Biol. 28(2): 209-219 (2021) - 2020
- [j5]Qianran Li, Dario Ghersi, Ishwor Thapa, Ling Zhang, Hesham Ali, Kate Cooper:
Measurement of structural change in co-expression networks from cancer gene expression data. Int. J. Data Min. Bioinform. 24(4): 291-305 (2020) - [c18]Suyeon Kim, Ishwor Thapa, Farial Samadi, Hesham Ali:
Computational Approaches for Drug Design: A Focus on Drug Repurposing. IWBBIO 2020: 213-223
2010 – 2019
- 2019
- [j4]Matthew L. Hale, Ishwor Thapa, Dario Ghersi
:
FunSet: an open-source software and web server for performing and displaying Gene Ontology enrichment analysis. BMC Bioinform. 20(1): 359:1-359:8 (2019) - [j3]Ling Zhang, Ishwor Thapa, Christian Haas, Dhundy Bastola:
Multiplatform biomarker identification using a data-driven approach enables single-sample classification. BMC Bioinform. 20(1): 601:1-601:13 (2019) - [c17]Qianran Li, Dario Ghersi, Ishwor Thapa, Ling Zhang, Hesham Ali, Kate Cooper:
Identifying Structural Changes in Correlation Networks Models of Cancer Gene Expression by Stage. BIBM 2019: 2075-2082 - [c16]Ishwor Thapa, Hesham Ali:
A New Graph Database System for Multi-omics Data Integration and Mining Complex Biological Information. ICCABS 2019: 171-183 - [c15]Suyeon Kim, Ishwor Thapa, Ling Zhang, Hesham Ali:
On Identifying Candidates for Drug Repurposing for the Treatment of Ulcerative Colitis using Gene Expression Data. IWBBIO (1) 2019: 513-521 - 2018
- [c14]Suyeon Kim, Ishwor Thapa, Hesham H. Ali:
A Graph-Theoretic Approach for Identifying Bacterial Inter-correlations and Functional Pathways in Microbiome Data. BIBM 2018: 405-411 - 2017
- [j2]Oliver Bonham-Carter, Ishwor Thapa, Steven G. From, Dhundy Bastola:
A study of bias and increasing organismal complexity from their post-translational modifications and reaction site interplays. Briefings Bioinform. 18(1): 69-84 (2017) - [c13]Suyeon Kim, Ishwor Thapa, Guoqing Lu, Lifeng Zhu, Hesham H. Ali:
A systems biology approach for modeling microbiomes using split graphs. BIBM 2017: 2062-2068 - 2015
- [c12]Jasjit K. Banwait, Schuyler P. Dougherty, Ishwor Thapa, Dhundy Kiran Bastola:
Guilt-by association approach to identify novel human aging-related genes using protein domains. BIBM 2015: 301-304 - [c11]Akshay Balasubramanya, Ishwor Thapa, Dhundy Bastola, Dario Ghersi:
A novel approach to identify shared fragments in drugs and natural products. BIBM 2015: 575-580 - [c10]Ishwor Thapa, Howard S. Fox, Dhundy R. Bastola:
Transcriptome analysis of HIV-1 virus in understanding the effect of antiretroviral drugs (cART) and methamphetamine on the virus. BIBM 2015: 962-968 - [c9]Julia Warnke-Sommer, Ishwor Thapa, Hesham H. Ali:
Next generation sequence assembler mis-assembly of phage genomes with terminal redundancy. BIBM 2015: 1102-1108 - 2014
- [c8]Oliver Bonham-Carter, Ishwor Thapa, Dhundy Bastola:
Evidence of post translational modification bias extracted from the tRNA and corresponding amino acid interplay across a set of diverse organisms. BCB 2014: 774-781 - 2013
- [c7]Kathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali:
On Mining Biological Signals Using Correlation Networks. ICDM Workshops 2013: 327-334 - [c6]Rohan Khazanchi, Kathryn Dempsey, Ishwor Thapa, Hesham H. Ali:
On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks. ICDM Workshops 2013: 343-348 - 2012
- [j1]Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali:
Functional identification in correlation networks using gene ontology edge annotation. Int. J. Comput. Biol. Drug Des. 5(3/4): 222-244 (2012) - [c5]Ishwor Thapa, Sanjukta Bhowmick, Dhundy Bastola:
A comparison between hierarchical clustering and community detection method in the collection of gene targets for molecular identification of pathogenic fungi. BIBM Workshops 2012: 756-761 - [c4]Dhundy Bastola, Scott McGrath, Sanjukta Bhowmick, Ishwor Thapa:
A Comparison of Computational Approaches in the Molecular Identification of Pathogenic Organisms. HISB 2012: 73 - 2011
- [c3]Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali:
Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search. BIBM Workshops 2011: 255-261 - 2010
- [c2]Ishwor Thapa, Harvey P. Siy:
Assessing the impact of refactoring activities on the JHotDraw project. SAC 2010: 2369-2370
2000 – 2009
- 2007
- [c1]Sagun Dhakhwa, Patrick A. V. Hall, Ganesh Bahadur Ghimire, Prakash Manandhar, Ishwor Thapa:
Sambad - Computer Interfaces for Non-literates. HCI (1) 2007: 721-730
Coauthor Index
aka: Hesham H. Ali
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