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James M. Osborne
Person information
- affiliation: University Of Melbourne, School of Mathematics and Statistics, VIC, Australia
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2020 – today
- 2024
- [j19]Domenic P. J. Germano, James M. Osborne
:
Advancements in multicellular simulations. Nat. Comput. Sci. 4(5): 312-313 (2024) - 2023
- [j18]Ivo Siekmann, James M. Osborne:
Editorial: Do individuals matter? - Individual-based versus population-based models applied to biology and health. Frontiers Appl. Math. Stat. 9 (2023) - [j17]Jessica R. Crawshaw
, Jennifer A. Flegg, Miguel O. Bernabeu
, James M. Osborne:
Mathematical models of developmental vascular remodelling: A review. PLoS Comput. Biol. 19(8) (2023) - 2022
- [j16]Jessica R. Crawshaw
, Jennifer A. Flegg
, James M. Osborne
:
A simple history-dependent remeshing technique to increase finite element model stability in elastic surface deformations. J. Comput. Appl. Math. 405: 113876 (2022) - [j15]Phillip J. Brown, J. Edward F. Green
, Benjamin J. Binder, James M. Osborne
:
Publisher Correction: A rigid body framework for multicellular modeling. Nat. Comput. Sci. 2(1): 59 (2022) - [j14]Claire Miller
, Edmund J. Crampin, James M. Osborne
:
Multiscale modelling of desquamation in the interfollicular epidermis. PLoS Comput. Biol. 18(8) (2022) - 2021
- [j13]Phillip J. Brown, J. Edward F. Green
, Benjamin J. Binder, James M. Osborne
:
A rigid body framework for multicellular modeling. Nat. Comput. Sci. 1(11): 754-766 (2021) - 2020
- [j12]Lotte B. Romijn
, Axel A. Almet, Chin Wee Tan, James M. Osborne
:
Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt. BMC Bioinform. 21(1): 95 (2020) - [j11]Fergus R. Cooper
, Ruth E. Baker
, Miguel O. Bernabeu
, Rafel Bordas
, Louise Bowler
, Alfonso Bueno-Orovio
, Helen M. Byrne
, Valentina Carapella
, Louie Cardone-Noott, Jonathan Cooper
, Sara Dutta, Benjamin D. Evans
, Alexander G. Fletcher
, James A. Grogan, Wenxian Guo
, Daniel G. Harvey, Maurice Hendrix
, David Kay
, Jochen Kursawe
, Philip K. Maini
, Beth McMillan
, Gary R. Mirams
, James M. Osborne
, Pras Pathmanathan
, Joe Pitt-Francis
, Martin Robinson
, Blanca Rodríguez
, Raymond J. Spiteri, David Gavaghan
:
Chaste: Cancer, Heart and Soft Tissue Environment. J. Open Source Softw. 5(47): 1848 (2020) - [j10]T. J. Sego
, Josua Aponte-Serrano
, Juliano Ferrari Gianlupi
, Samuel R. Heaps
, Kira Breithaupt
, Lutz Brusch
, Jessica R. Crawshaw
, James M. Osborne
, Ellen M. Quardokus
, Richard K. Plemper, James A. Glazier
:
A modular framework for multiscale, multicellular, spatiotemporal modeling of acute primary viral infection and immune response in epithelial tissues and its application to drug therapy timing and effectiveness. PLoS Comput. Biol. 16(12) (2020) - [i2]Jessica R. Crawshaw, Jennifer A. Flegg, James M. Osborne:
A simple history dependent remeshing technique to increase finite element model stability in elastic surface deformations. CoRR abs/2011.06756 (2020)
2010 – 2019
- 2018
- [c2]James M. Osborne, Miguel O. Bernabeu:
A Fully Discrete Open Source Framework for the Simulation of Vascular Remodelling. EMBC 2018: 4552-4555 - 2017
- [j9]Sophie K. Kay
, Heather A. Harrington, Sarah Shepherd, Keith Brennan
, Trevor Dale
, James M. Osborne
, David J. Gavaghan
, Helen M. Byrne
:
The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt. PLoS Comput. Biol. 13(2) (2017) - [j8]James M. Osborne
, Alexander G. Fletcher
, Joe Pitt-Francis
, Philip K. Maini
, David J. Gavaghan
:
Comparing individual-based approaches to modelling the self-organization of multicellular tissues. PLoS Comput. Biol. 13(2) (2017) - 2015
- [j7]Daniel G. Harvey, Alexander G. Fletcher
, James M. Osborne
, Joe Pitt-Francis
:
A parallel implementation of an off-lattice individual-based model of multicellular populations. Comput. Phys. Commun. 192: 130-137 (2015) - [j6]Bernhard Knapp, Rémi Bardenet, Miguel O. Bernabeu, Rafel Bordas
, Maria Bruna
, Ben Calderhead, Jonathan Cooper
, Alexander G. Fletcher
, Derek Groen, Bram Kuijper
, Joanna Lewis
, Greg J. McInerny, Timo Minssen
, James M. Osborne
, Verena Paulitschke, Joe Pitt-Francis
, Jelena Todoric, Christian A. Yates
, David Gavaghan
, Charlotte M. Deane
:
Ten Simple Rules for a Successful Cross-Disciplinary Collaboration. PLoS Comput. Biol. 11(4) (2015) - [i1]Derek Groen, Xiaohu Guo, James A. Grogan, Ulf D. Schiller, James M. Osborne:
Software development practices in academia: a case study comparison. CoRR abs/1506.05272 (2015) - 2014
- [j5]Thomas A. Dunton, Joseph E. Goose, David J. Gavaghan
, Mark S. P. Sansom, James M. Osborne
:
The Free Energy Landscape of Dimerization of a Membrane Protein, NanC. PLoS Comput. Biol. 10(1) (2014) - [j4]James M. Osborne
, Miguel O. Bernabeu, Maria Bruna
, Ben Calderhead, Jonathan Cooper
, Neil Dalchau
, Sara-Jane Dunn, Alexander G. Fletcher
, Robin Freeman, Derek Groen
, Bernhard Knapp, Greg J. McInerny, Gary R. Mirams
, Joe Pitt-Francis
, Biswa Sengupta
, David W. Wright, Christian A. Yates
, David Gavaghan
, Stephen Emmott, Charlotte M. Deane
:
Ten Simple Rules for Effective Computational Research. PLoS Comput. Biol. 10(3) (2014) - 2013
- [j3]Gary R. Mirams
, Christopher J. Arthurs
, Miguel O. Bernabeu, Rafel Bordas
, Jonathan Cooper
, Alberto Corrias
, Yohan Davit, Sara-Jane Dunn, Alexander G. Fletcher
, Daniel G. Harvey, Megan E. Marsh, James M. Osborne
, Pras Pathmanathan, Joe Pitt-Francis
, James Southern, Nejib Zemzemi
, David Gavaghan
:
Chaste: An Open Source C++ Library for Computational Physiology and Biology. PLoS Comput. Biol. 9(3) (2013) - [c1]Jonathan Cooper
, James M. Osborne
:
Connecting Models to Data in Multiscale Multicellular Tissue Simulations. ICCS 2013: 712-721 - 2012
- [j2]Sara-Jane Dunn, Paul L. Appleton, Scott A. Nelson, Inke S. Näthke
, David Gavaghan
, James M. Osborne
:
A Two-Dimensional Model of the Colonic Crypt Accounting for the Role of the Basement Membrane and Pericryptal Fibroblast Sheath. PLoS Comput. Biol. 8(5) (2012)
2000 – 2009
- 2009
- [j1]Joe Pitt-Francis
, Pras Pathmanathan, Miguel O. Bernabeu, Rafel Bordas
, Jonathan Cooper
, Alexander G. Fletcher
, Gary R. Mirams
, Philip J. Murray
, James M. Osborne
, Alex Walter, S. Jonathan Chapman
, Alan Garny, Ingeborg M. M. van Leeuwen, Philip K. Maini, Blanca Rodríguez, Sarah L. Waters
, Jonathan P. Whiteley, Helen M. Byrne
, David Gavaghan
:
Chaste: A test-driven approach to software development for biological modelling. Comput. Phys. Commun. 180(12): 2452-2471 (2009)
Coauthor Index
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last updated on 2024-09-07 01:00 CEST by the dblp team
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