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Jean-Marie Bouteiller
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2020 – today
- 2023
- [j16]Jinze Du, Andres Morales, Pragya Kosta, Jean-Marie C. Bouteiller, Gema Martinez-Navarrete, David J. Warren, Eduardo Fernández, Gianluca Lazzi:
Electrical Stimulation Induced Current Distribution in Peripheral Nerves Varies Significantly with the Extent of Nerve Damage: A Computational Study Utilizing Convolutional Neural Network and Realistic Nerve Models. Int. J. Neural Syst. 33(4): 2350022:1-2350022:14 (2023) - 2022
- [c24]Jinze Du
, Andres Morales
, Pragya Kosta
, Jean-Marie C. Bouteiller
, Gema Martinez
, David J. Warren
, Eduardo Fernández
, Gianluca Lazzi
:
Electrical Stimulation Induced Current Distribution in Peripheral Nerves Varies Significantly with the Extent of Nerve Damage: A Computational Study Utilizing Convolutional Neural Network and Realistic Nerve Models. IWINAC (1) 2022: 526-535 - 2021
- [j15]Duy-Tan J. Pham, Gene J. Yu, Jean-Marie C. Bouteiller
, Theodore W. Berger:
Bridging Hierarchies in Multi-Scale Models of Neural Systems: Look-Up Tables Enable Computationally Efficient Simulations of Non-linear Synaptic Dynamics. Frontiers Comput. Neurosci. 15: 733155 (2021) - [c23]Jinze Du, Andres Morales, Javad Paknahad, Pragya Kosta, Jean-Marie C. Bouteiller
, Eduardo Fernández, Gianluca Lazzi:
Electrode Spacing and Current Distribution in Electrical Stimulation of Peripheral Nerve: A Computational Modeling Study using Realistic Nerve Models. EMBC 2021: 4416-4419 - [c22]Ege Iseri, Pragya Kosta, Javad Paknahad, Jean-Marie C. Bouteiller
, Gianluca Lazzi:
A Computational Model Simulates Light-Evoked Responses in the Retinal Cone Pathway. EMBC 2021: 4482-4486 - [c21]Javad Paknahad, Pragya Kosta, Ege Iseri, Shayan Farzad, Jean-Marie C. Bouteiller
, Mark S. Humayun, Gianluca Lazzi:
Modeling ON Cone Bipolar Cells for Electrical Stimulation. EMBC 2021: 6547-6550 - 2020
- [j14]Clayton S. Bingham, Adam Mergenthal, Jean-Marie C. Bouteiller
, Dong Song, Gianluca Lazzi, Theodore W. Berger:
ROOTS: An Algorithm to Generate Biologically Realistic Cortical Axons and an Application to Electroceutical Modeling. Frontiers Comput. Neurosci. 14: 13 (2020) - [j13]Clayton S. Bingham, Javad Paknahad
, Christopher B. C. Girard
, Kyle Loizos, Jean-Marie C. Bouteiller
, Dong Song, Gianluca Lazzi, Theodore W. Berger:
Admittance Method for Estimating Local Field Potentials Generated in a Multi-Scale Neuron Model of the Hippocampus. Frontiers Comput. Neurosci. 14: 72 (2020) - [j12]Adam Mergenthal, Jean-Marie C. Bouteiller
, Gene J. Yu, Theodore W. Berger:
A Computational Model of the Cholinergic Modulation of CA1 Pyramidal Cell Activity. Frontiers Comput. Neurosci. 14: 75 (2020) - [j11]Gene J. Yu, Jean-Marie C. Bouteiller
, Theodore W. Berger:
Topographic Organization of Correlation Along the Longitudinal and Transverse Axes in Rat Hippocampal CA3 Due to Excitatory Afferents. Frontiers Comput. Neurosci. 14: 588881 (2020) - [c20]Jiaan Zhu, Jian Loong Lim Jethro, Bowen Li, Adam Mergenthal, Adnan A. Rayes, Hejun Tang, Theodore W. Berger, Jean-Marie C. Bouteiller
:
A Computational Model of Mitochondria Motility in Axons. EMBC 2020: 2287-2290
2010 – 2019
- 2019
- [j10]Vito Di Maio
, Jean-Marie C. Bouteiller
:
Editorial: Influence of Inter- and Intra-Synaptic Factors on Information Processing in the Brain. Frontiers Comput. Neurosci. 13: 32 (2019) - [j9]Gene J. Yu
, Jean-Marie C. Bouteiller
, Dong Song
, Theodore W. Berger:
Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study. IEEE Trans. Biomed. Eng. 66(10): 2728-2739 (2019) - [c19]Jean-Marie C. Bouteiller, Adam R. Mergenthal, Eric Y. Hu, Theodore W. Berger:
Pathogenic Processes Underlying Alzheimer's Disease: Modeling the Effects of Amyloid Beta on Synaptic Transmission. EMBC 2019: 1956-1959 - 2018
- [j8]Eric Y. Hu, Adam Mergenthal, Clayton S. Bingham, Dong Song
, Jean-Marie Bouteiller
, Theodore W. Berger:
A Glutamatergic Spine Model to Enable Multi-Scale Modeling of Nonlinear Calcium Dynamics. Frontiers Comput. Neurosci. 12: 58 (2018) - [j7]Clayton S. Bingham
, Kyle Loizos
, Gene J. Yu, Andrew Gilbert
, Jean-Marie C. Bouteiller
, Dong Song
, Gianluca Lazzi, Theodore W. Berger:
Model-Based Analysis of Electrode Placement and Pulse Amplitude for Hippocampal Stimulation. IEEE Trans. Biomed. Eng. 65(10): 2278-2289 (2018) - [c18]Clayton S. Bingham, Jean-Marie C. Bouteiller, Dong Song
, Theodore W. Berger:
Graph-Based Models of Cortical Axons for the Prediction of Neuronal Response to Extracellular Electrical Stimulation. EMBC 2018: 1380-1383 - [c17]Adam Mergenthal, Jean-Marie C. Bouteiller
, Theodore W. Berger:
Cholinergic Modulation of CA1 Pyramidal Cells via M1 Muscarinic Receptor Activation: A Computational Study at Physiological and Supraphysiological Levels. EMBC 2018: 1396-1399 - [c16]Eric Y. Hu, Gene J. Yu, Dong Song
, Jean-Marie C. Bouteiller, Theodore W. Berger:
Modeling Nonlinear Synaptic Dynamics: A Laguerre-Volterra Network Framework for Improved Computational Efficiency in Large Scale Simulations. EMBC 2018: 6129-6132 - 2017
- [j6]Anne Florence Keller
, Nicolas Ambert, Arnaud Legendre, Mathieu Bedez, Jean-Marie Bouteiller, Serge Bischoff, Michel Baudry, Saliha Moussaoui:
Impact of Synaptic Localization and Subunit Composition of Ionotropic Glutamate Receptors on Synaptic Function: Modeling and Simulation Studies. IEEE ACM Trans. Comput. Biol. Bioinform. 14(4): 892-904 (2017) - 2016
- [c15]Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert
, Jean-Marie Bouteiller, Dong Song
, Gianluca Lazzi, Theodore W. Berger:
A large-scale detailed neuronal model of electrical stimulation of the dentate gyrus and perforant path as a platform for electrode design and optimization. EMBC 2016: 2794-2797 - [c14]Eric Y. Hu, Jean-Marie C. Bouteiller, Dong Song
, Theodore W. Berger:
Development of a detailed model of calcium dynamics at the postsynaptic spine of an excitatory synapse. EMBC 2016: 6102-6105 - 2015
- [j5]Endre T. Somogyi, Jean-Marie Bouteiller
, James A. Glazier
, Matthias König
, J. Kyle Medley
, Maciej H. Swat, Herbert M. Sauro:
libRoadRunner: a high performance SBML simulation and analysis library. Bioinform. 31(20): 3315-3321 (2015) - [j4]Eric Y. Hu, Jean-Marie C. Bouteiller
, Dong Song
, Michel Baudry, Theodore W. Berger:
Volterra representation enables modeling of complex synaptic nonlinear dynamics in large-scale simulations. Frontiers Comput. Neurosci. 9: 112 (2015) - [c13]Eric Y. Hu, Jean-Marie C. Bouteiller
, Dong Song
, Theodore W. Berger:
The volterra functional series is a viable alternative to kinetic models for synaptic modeling -calibration and benchmarking. EMBC 2015: 3291-3294 - [c12]Jean-Marie C. Bouteiller
, Zhuobo Feng, Alexander Onopa, Mike Huang, Eric Y. Hu, Endre T. Somogyi, Michel Baudry, Serge Bischoff, Theodore W. Berger:
Maximizing predictability of a bottom-up complex multi-scale model through systematic validation and multi-objective multi-level optimization. NER 2015: 300-303 - [i1]Endre T. Somogyi, Jean-Marie Bouteiller, James A. Glazier, Matthias König, J. Kyle Medley, Maciej H. Swat, Herbert M. Sauro:
libRoadRunner: A High Performance SBML Simulation and Analysis Library. CoRR abs/1503.01095 (2015) - 2014
- [c11]Eric Y. Hu, Jean-Marie C. Bouteiller
, Mike Huang, Dong Song
, Theodore W. Berger:
A comparison between direct and indirect measurements of neurotransmitter vesicle release dynamics: A computational study. EMBC 2014: 1155-1158 - 2013
- [c10]Viviane S. Ghaderi, Dong Song
, Jean-Marie C. Bouteiller
, John Choma Jr., Theodore W. Berger:
A programmable analog subthreshold biomimetic model for bi-directional communication with the brain. EMBC 2013: 787-790 - [c9]Jean-Marie C. Bouteiller
, Sushmita L. Allam, Nicolas Ambert, Renaud Greget, Eric Y. Hu, Serge Bischoff, Michel Baudry, Theodore W. Berger:
Influence of ionotropic receptors localization on glutamatergic synaptic response to paired-pulse stimulation protocol. EMBC 2013: 1037-1040 - [c8]Jean-Marie C. Bouteiller
, Eric Y. Hu, Sushmita L. Allam, Viviane S. Ghaderi, Dong Song
, Theodore W. Berger:
Insights on synaptic paired-pulse response using parametric and non-parametric models. EMBC 2013: 1041-1044 - 2012
- [j3]Sushmita L. Allam, Viviane S. Ghaderi, Jean-Marie Bouteiller
, Arnaud Legendre, Nicolas Ambert, Renaud Greget, Serge Bischoff, Michel Baudry, Theodore W. Berger:
A Computational Model to Investigate Astrocytic Glutamate Uptake Influence on Synaptic Transmission and Neuronal Spiking. Frontiers Comput. Neurosci. 6: 70 (2012) - [c7]Sushmita L. Allam, Jean-Marie C. Bouteiller
, Eric Y. Hu, Renaud Greget, Nicolas Ambert, Serge Bischoff, Michel Baudry, Theodore W. Berger:
Influence of ionotropic receptor location on their dynamics at glutamatergic synapses. EMBC 2012: 1374-1377 - [c6]Jean-Marie C. Bouteiller
, Arnaud Legendre, Sushmita L. Allam, Nicolas Ambert, Eric Y. Hu, Renaud Greget, Anne Florence Keller, Fabien Pernot, Serge Bischoff, Michel Baudry, Theodore W. Berger:
Modeling of the nervous system: From modulation of glutamatergic and gabaergic molecular dynamics to neuron spiking activity. EMBC 2012: 6612-6615 - 2011
- [j2]Jean-Marie Bouteiller
, Sushmita L. Allam, Eric Y. Hu, Renaud Greget, Nicolas Ambert, Anne Florence Keller, Serge Bischoff, Michel Baudry, Theodore W. Berger:
Integrated Multiscale Modeling of the Nervous System: Predicting Changes in Hippocampal Network Activity by a Positive AMPA Receptor Modulator. IEEE Trans. Biomed. Eng. 58(10): 3008-3011 (2011) - [c5]Jean-Marie C. Bouteiller
, Sushmita L. Allam, Eric Y. Hu, Renaud Greget, Nicolas Ambert, Anne Florence Keller, Fabien Pernot, Serge Bischoff, Michel Baudry, Theodore W. Berger:
Modeling of the nervous system: From molecular dynamics and synaptic modulation to neuron spiking activity. EMBC 2011: 445-448 - [c4]Viviane S. Ghaderi, Sushmita L. Allam, Nicolas Ambert, Jean-Marie C. Bouteiller
, John Choma Jr., Theodore W. Berger:
Modeling neuron-glia interactions: From parametric model to neuromorphic hardware. EMBC 2011: 3581-3584
2000 – 2009
- 2006
- [c3]Jean-Marie C. Bouteiller
, Yumei Qiu, Mohammed B. Ziane, Michel Baudry, Theodore W. Berger:
EONS: An Online Synaptic Modeling Platform. EMBC 2006: 4155-4158 - 2003
- [c2]Jean-Marie Bouteiller, Benjamin Wu, Michel Baudry:
Implicit functions: applications in medicine and biology. Medical Imaging: Image-Guided Procedures 2003 - 2002
- [j1]Ruggero Scorcioni, Jean-Marie Bouteiller, Giorgio A. Ascoli:
A real-scale anatomical model of the dentate gyrus based on single cell reconstructions and 3D rendering of a brain atlas. Neurocomputing 44-46: 629-634 (2002) - [c1]Jean-Marie Bouteiller, Michel Baudry:
Neuroanatomical Imaging: Constrained 3D Reconstruction Using Variational Implicit Techniques. 3DPVT 2002: 62-65
Coauthor Index
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