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Safaai Bin Deris
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2010 – 2019
- 2019
[j44]Kauthar Mohd Daud
, Mohd Saberi Mohamad, Zalmiyah Zakaria, Rohayanti Hassan, Zuraini Ali Shah, Safaai Deris, Zuwairie Ibrahim, Suhaimi Napis, Richard O. Sinnott:
A non-dominated sorting Differential Search Algorithm Flux Balance Analysis (ndsDSAFBA) for in silico multiobjective optimization in identifying reactions knockout. Comput. Biol. Medicine 113 (2019)- [j43]Muhammad Akmal bin Remli, Mohd Saberi Mohamad, Safaai Deris, Azurah A. Samah, Sigeru Omatu, Juan M. Corchado:
Cooperative enhanced scatter search with opposition-based learning schemes for parameter estimation in high dimensional kinetic models of biological systems. Expert Syst. Appl. 116: 131-146 (2019) - 2018
- [j42]Muhammad Azharuddin Arif, Mohd Saberi Mohamad, Muhammad Shafie Abdul Latif, Safaai Deris, Muhammad Akmal bin Remli, Kauthar Mohd Daud, Zuwairie Ibrahim, Sigeru Omatu, Juan Manuel Corchado Rodríguez:
A hybrid of Cuckoo Search and Minimization of Metabolic Adjustment to optimize metabolites production in genome-scale models. Comput. Biol. Medicine 102: 112-119 (2018) - [j41]Amy Hamijah Ab. Hamid, Mohd Zaidi Abd Rozan, Roliana Ibrahim, Safaai Deris, Ali Selamat, Muhd. Noor Muhd Yunus:
Requirements engineering of Malaysian radiological medical emergency response simulator. J. Inf. Telecommun. 2(3): 305-321 (2018) - [j40]Samira Fotoohifiroozabadi, Mohd Saberi Mohamad, Safaai Deris:
NAHAL-Flex: A Numerical and Alphabetical Hinge Detection Algorithm for Flexible Protein Structure Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 15(3): 934-943 (2018) - [c70]Mei Yee Aw, Mohd Saberi Mohamad, Chuii Khim Chong, Safaai Deris, Muhammad Akmal bin Remli, Mohd Arfian Ismail, Juan Manuel Corchado, Sigeru Omatu:
Parameter Estimation of Essential Amino Acids in Arabidopsis thaliana Using Hybrid of Bees Algorithm and Harmony Search. PACBB 2018: 9-16 - 2017
- [j39]Ahmad Muhaimin Ismail, Mohd Saberi Mohamad, Hairudin Abdul Majid, Khairul Hamimah Abas, Safaai Deris, Nazar Zaki, Siti Zaiton Mohd Hashim, Zuwairie Ibrahim, Muhammad Akmal bin Remli:
An improved hybrid of particle swarm optimization and the gravitational search algorithm to produce a kinetic parameter estimation of aspartate biochemical pathways. Biosyst. 162: 81-89 (2017) - [j38]Muhammad Akmal bin Remli, Safaai Deris, Mohd Saberi Mohamad, Sigeru Omatu, Juan Manuel Corchado:
An enhanced scatter search with combined opposition-based learning for parameter estimation in large-scale kinetic models of biochemical systems. Eng. Appl. Artif. Intell. 62: 164-180 (2017) - [j37]Shayma Mustafa Mohi-Aldeen, Radziah Mohamad, Safaai Deris:
Automated path testing using the negative selection algorithm. Int. J. Comput. Vis. Robotics 7(1/2): 160-171 (2017) - [j36]Samira Fotoohifiroozabadi, Mohd Saberi Mohamad, Safaai Deris:
Samira-VP: A simple protein alignment method with rechecking the alphabet vector positions. J. Bioinform. Comput. Biol. 15(2): 1750004:1-1750004:24 (2017) - [c69]Muhammad Akmal bin Remli, Kauthar Mohd Daud, Hui Wen Nies, Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, Shahreen Kasim, Ghazali Sulong:
K-Means Clustering with Infinite Feature Selection for Classification Tasks in Gene Expression Data. PACBB 2017: 50-57 - [c68]Hui Wen Nies, Kauthar Mohd Daud, Muhammad Akmal bin Remli, Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, Shahreen Kasim, Ghazali Sulong:
Classification of Colorectal Cancer Using Clustering and Feature Selection Approaches. PACBB 2017: 58-65 - 2016
- [j35]Shayma Mustafa Mohi-Aldeen, Radziah Mohamad, Safaai Deris:
Application of Negative Selection Algorithm (NSA) for test data generation of path testing. Appl. Soft Comput. 49: 1118-1128 (2016) - [j34]Weng Howe Chan, Mohd Saberi Mohamad, Safaai Deris, Nazar Zaki, Shahreen Kasim, Sigeru Omatu, Juan Manuel Corchado, Hany Al Ashwal:
Identification of informative genes and pathways using an improved penalized support vector machine with a weighting scheme. Comput. Biol. Medicine 77: 102-115 (2016) - [j33]Weng Howe Chan, Mohd Saberi Mohamad, Safaai Deris, Juan Manuel Corchado, Sigeru Omatu, Zuwairie Ibrahim, Shahreen Kasim:
An improved gSVM-SCADL2 with firefly algorithm for identification of informative genes and pathways. Int. J. Bioinform. Res. Appl. 12(1): 72-93 (2016) - [c67]Sin Yi Lim, Mohd Saberi Mohamad, Lian En Chai, Safaai Deris, Weng Howe Chan, Sigeru Omatu, Juan Manuel Corchado, Muhammad Farhan Sjaugi, Muhammad Mahfuz Zainuddin, Gopinathaan Rajamohan, Zuwairie Ibrahim, Zulkifli Md. Yusof:
Investigation of the Effects of Imputation Methods for Gene Regulatory Networks Modelling Using Dynamic Bayesian Networks. DCAI 2016: 413-421 - [c66]Zhenya Li, Richard O. Sinnott, Yee Wen Choon, Muhammad Farhan Sjaugi, Mohd Saberi Mohamad, Safaai Deris, Suhaimi Napis, Sigeru Omatu, Juan Manuel Corchado, Zuwairie Ibrahim, Zulkifli Md. Yusof:
Exploring the High Performance Computing-Enablement of a Suite of Gene-Knockout Based Genetic Engineering Applications. PACBB 2016: 133-139 - [c65]Nor Syahirah Abdul Wahid, Mohd Saberi Mohamad, Abdul Hakim Mohamed Salleh, Safaai Deris, Weng Howe Chan, Sigeru Omatu, Juan Manuel Corchado, Muhammad Farhan Sjaugi, Zuwairie Ibrahim, Zulkifli Md. Yusof:
A Hybrid of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production. PACBB 2016: 183-191 - 2015
- [j32]Abdul Hakim Mohamed Salleh, Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias:
Metabolites production improvement by identifying minimal genomes and essential genes using flux balance analysis. Int. J. Data Min. Bioinform. 12(1): 85-99 (2015) - 2014
- [j31]Shi Jing Lu, Abdul Hakim Mohamed Salleh, Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, Michifumi Yoshioka:
Identification of gene knockout strategies using a hybrid of an ant colony optimization algorithm and flux balance analysis to optimize microbial strains. Comput. Biol. Chem. 53: 175-183 (2014) - [j30]Lian En Chai, Swee Kuan Loh, Swee Thing Low, Mohd Saberi Mohamad, Safaai Deris, Zalmiyah Zakaria:
A review on the computational approaches for gene regulatory network construction. Comput. Biol. Medicine 48: 55-65 (2014) - [j29]Shiue Kee Chong, Mohd Saberi Mohamad, Abdul Hakim Mohamed Salleh, Yee Wen Choon, Chuii Khim Chong, Safaai Deris:
A hybrid of ant colony optimization and minimization of metabolic adjustment to improve the production of succinic acid in Escherichia coli. Comput. Biol. Medicine 49: 74-82 (2014) - [j28]Muhammad Faiz Misman, Mohd Saberi Mohamad, Safaai Deris, Siti Zaiton Mohd Hashim:
A group-specific tuning parameter for hybrid of SVM and SCAD in identification of informative genes and pathways. Int. J. Data Min. Bioinform. 10(2): 146-161 (2014) - [j27]Yee Wen Choon, Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias:
A hybrid of bees algorithm and flux balance analysis (BAFBA) for the optimisation of microbial strains. Int. J. Data Min. Bioinform. 10(2): 225-238 (2014) - [j26]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Afnizanfaizal Abdullah:
An improved differential evolution algorithm for enhancing biochemical pathways simulation and production. Int. J. Data Min. Bioinform. 10(4): 424-439 (2014) - [c64]Ching Lee Koo, Mohd Saberi Mohamad, Sigeru Omatu, Abdul Hakim Mohamed Salleh, Safaai Deris, Michifumi Yoshioka:
A gene knockout strategy for succinate production using a hybrid algorithm of bees algorithm and minimization of metabolic adjustment. GrC 2014: 131-136 - [c63]Swee Thing Low, Mohd Saberi Mohamad, Sigeru Omatu, Lian En Chai, Safaai Deris, Michifumi Yoshioka:
Inferring gene regulatory networks from perturbed gene expression data using a dynamic Bayesian network with a Markov Chain Monte Carlo algorithm. GrC 2014: 179-184 - [c62]Amy Hamijah binti Ab. Hamid, Mohd Zaidi Abd Rozan, Roliana Ibrahim, Safaai Deris, Ali Selamat, Muhd. Noor Muhd Yunus:
Requirements Engineering of Malaysia's Radiation and Nuclear Emergency Plan Simulator. SoMeT (Selected Papers) 2014: 83-97 - [c61]Amy Hamijah Ab. Hamid, Mohd Zaidi Abd Rozan, Roliana Ibrahim, Safaai Deris, Ali Selamat, Muhd. Noor Muhd Yunus:
Requirements Engineering of Malaysia Radiation and Nuclear Emergency Plan Simulator. SoMeT 2014: 476-492 - [c60]Shayma Mustafa Mohi-Aldeen, Safaai Deris, Radziah Mohamad:
Systematic Mapping Study in Automatic Test Case Generation. SoMeT 2014: 703-720 - 2013
- [j25]Ahmad Shahrizal Muhamad, Safaai Deris:
An artificial immune system for solving production scheduling problems: a review. Artif. Intell. Rev. 39(2): 97-108 (2013) - [j24]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka, Afnizanfaizal Abdullah, Zuwairie Ibrahim:
An enhancement of binary particle swarm optimization for gene selection in classifying cancer classes. Algorithms Mol. Biol. 8: 15 (2013) - [j23]Shahreen Kasim, Safaai Deris, Razib M. Othman:
Multi-stage filtering for improving confidence level and determining dominant clusters in clustering algorithms of gene expression data. Comput. Biol. Medicine 43(9): 1120-1133 (2013) - [j22]Jafar Razmara, Safaai Bin Deris, Sepideh Parvizpour:
A context evaluation approach for structural comparison of proteins using cross entropy over n-gram modelling. Comput. Biol. Medicine 43(10): 1614-1621 (2013) - [c59]Yee Wen Choon, Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, Lian En Chai, Chuii Khim Chong:
Using Bees Hill Flux Balance Analysis (BHFBA) for in silico Microbial Strain Optimization. ACIIDS (1) 2013: 375-384 - [c58]Kohbalan Moorthy, Mohd Saberi Mohamad, Safaai Deris:
Multiple Gene Sets for Cancer Classification Using Gene Range Selection Based on Random Forest. ACIIDS (1) 2013: 385-393 - [c57]Abdul Hakim Mohamed Salleh, Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias:
Identifying Minimal Genomes and Essential Genes in Metabolic Model Using Flux Balance Analysis. ACIIDS (1) 2013: 414-423 - [c56]Lian En Chai, Mohd Saberi Mohamad, Safaai Deris, Chuii Khim Chong, Yee Wen Choon:
Inferring E. coli SOS Response Pathway from Gene Expression Data Using IST-DBN with Time Lag Estimation. BDI 2013: 5-14 - [c55]Nor Farhah Binti Saidin, Chuii Khim Chong, Yee Wen Choon, Lian En Chai, Safaai Deris, Rosli Md. Illias, Mohd Shahir Shamsir, Mohd Saberi Mohamad:
Using Ant Colony Optimization (ACO) on Kinetic Modeling of the Acetoin Production in Lactococcus Lactis C7. BDI 2013: 25-35 - [c54]Siew Teng Ng, Chuii Khim Chong, Yee Wen Choon, Lian En Chai, Safaai Deris, Rosli Md. Illias, Mohd Shahir Shamsir, Mohd Saberi Mohamad:
Using Particle Swarm Optimization for Estimating Kinetics Parameters on Essential Amino Acid Production of Arabidopsis Thaliana. BDI 2013: 51-61 - [c53]Masarrah Abdul Mutalib, Lian En Chai, Chuii Khim Chong, Yee Wen Choon, Safaai Deris, Rosli Md. Illias, Mohd Saberi Mohamad:
Inferring Gene Networks from Gene Expression Data Using Dynamic Bayesian Network with Different Scoring Metric Approaches. BDI 2013: 77-86 - [c52]Leang Huat Yin, Yee Wen Choon, Lian En Chai, Chuii Khim Chong, Safaai Deris, Rosli Md. Illias, Mohd Saberi Mohamad:
Prediction of Vanillin Production in Yeast Using a Hybrid of Continuous Bees Algorithm and Flux Balance Analysis (CBAFBA). BDI 2013: 101-116 - [c51]Yee Wen Choon, Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, Lian En Chai, Chuii Khim Chong:
Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis (BHFBA) for Improving the Production of Ethanol in Bacillus Subtilis. BDI 2013: 117-126 - [c50]Seet Sun Lee, Yee Wen Choon, Lian En Chai, Chuii Khim Chong, Safaai Deris, Rosli Md. Illias, Mohd Saberi Mohamad:
A Hybrid of Artificial Bee Colony and Flux Balance Analysis for Identifying Optimum Knockout Strategies for Producing High Yields of Lactate in Echerichia Coli. BDI 2013: 127-137 - [c49]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
A Constraint and Rule in an Enhancement of Binary Particle Swarm Optimization to Select Informative Genes for Cancer Classification. PAKDD Workshops 2013: 168-178 - [c48]Jia Xing Yeoh, Chuii Khim Chong, Yee Wen Choon, Lian En Chai, Safaai Deris, Rosli Md. Illias, Mohd Saberi Mohamad:
Parameter Estimation Using Improved Differential Evolution (IDE) and Bacterial Foraging Algorithm to Model Tyrosine Production in Mus Musculus (Mouse). PAKDD Workshops 2013: 179-190 - [c47]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Yee Wen Choon, Lian En Chai:
Threonine Biosynthesis Pathway Simulation Using IBMDE with Parameter Estimation. PAKDD Workshops 2013: 191-200 - [c46]Lian En Chai, Mohd Saberi Mohamad, Safaai Deris, Chuii Khim Chong, Yee Wen Choon:
Modelling Gene Networks by a Dynamic Bayesian Network-Based Model with Time Lag Estimation. PAKDD Workshops 2013: 214-222 - [c45]Yee Wen Choon, Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, Lian En Chai, Chuii Khim Chong:
Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis (BHFBA) for Improving the Production of Succinic Acid and Glycerol in Saccharomyces cerevisiae. PAKDD Workshops 2013: 223-233 - [c44]Kohbalan Moorthy, Mohd Saberi Mohamad, Safaai Deris:
Multiclass Prediction for Cancer Microarray Data Using Various Variables Range Selection Based on Random Forest. PAKDD Workshops 2013: 247-257 - [c43]Muhammad Faiz Misman, Weng Howe Chan, Mohd Saberi Mohamad, Safaai Deris:
A Hybrid of SVM and SCAD with Group-Specific Tuning Parameters in Identification of Informative Genes and Biological Pathways. PAKDD Workshops 2013: 258-269 - 2012
- [j21]Jafar Razmara, Safaai Bin Deris, Sepideh Parvizpour:
TS-AMIR: a topology string alignment method for intensive rapid protein structure comparison. Algorithms Mol. Biol. 7: 4 (2012) - [j20]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Yee Wen Choon, Lian En Chai:
Improved Differential Evolution Algorithm for Parameter Estimation to Improve the Production of Biochemical Pathway. Int. J. Interact. Multim. Artif. Intell. 1(5): 22-29 (2012) - [j19]Farzana Kabir Ahmad, Safaai Deris, N. H. Othman:
The inference of breast cancer metastasis through gene regulatory networks. J. Biomed. Informatics 45(2): 350-362 (2012) - [c42]Yee Wen Choon, Mohd Saberi Mohamad, Safaai Deris, Chuii Khim Chong, Lian En Chai, Zuwairie Ibrahim, Sigeru Omatu:
Identifying Gene Knockout Strategies Using a Hybrid of Bees Algorithm and Flux Balance Analysis for in Silico Optimization of Microbial Strains. DCAI 2012: 371-378 - [c41]Lian En Chai, Mohd Saberi Mohamad, Safaai Deris, Chuii Khim Chong, Yee Wen Choon, Zuwairie Ibrahim, Sigeru Omatu:
Inferring Gene Regulatory Networks from Gene Expression Data by a Dynamic Bayesian Network-Based Model. DCAI 2012: 379-386 - [c40]Muhammad Faiz Misman, Mohd Saberi Mohamad, Safaai Deris, Raja Nurul Mardhiah Raja Mohamad, Siti Zaiton Mohd Hashim, Sigeru Omatu:
A Hybrid of SVM and SCAD with Group-Specific Tuning Parameter for Pathway-Based Microarray Analysis. DCAI 2012: 387-394 - [c39]Afnizanfaizal Abdullah, Safaai Deris, Mohd Saberi Mohamad, Siti Zaiton Mohd Hashim:
A New Hybrid Firefly Algorithm for Complex and Nonlinear Problem. DCAI 2012: 673-680 - [c38]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Afnizanfaizal Abdullah, Yee Wen Choon, Lian En Chai, Sigeru Omatu:
Using an Improved Differential Evolution Algorithm for Parameter Estimation to Simulate Glycolysis Pathway. DCAI 2012: 709-716 - [c37]Muhammad Akmal bin Remli, Safaai Bin Deris:
Automated biological pathway knowledge retrieval based on semantic web services composition and AI Planning. CAMP 2012: 281-284 - 2011
- [j18]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
A Modified Binary Particle Swarm Optimization for Selecting the Small Subset of Informative Genes From Gene Expression Data. IEEE Trans. Inf. Technol. Biomed. 15(6): 813-822 (2011) - [c36]Umi Kalsom Yusof, Rahmat Budiarto, Ibrahim Venkat, Safaai Deris:
Machine Loading Optimization in Flexible Manufacturing System Using a Hybrid of Bio-inspired and Musical-Composition Approach. BIC-TA 2011: 89-96 - [c35]Afnizanfaizal Abdullah, Safaai Deris, Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Satya Nanda Vel Arjunan:
An improved local best searching in Particle Swarm Optimization using Differential Evolution. HIS 2011: 115-120 - [c34]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, Lian En Chai:
Parameter Estimation for Simulation of Glycolysis Pathway by Using an Improved Differential Evolution. KTW 2011: 352-355 - [c33]Farzana Kabir Ahmad, Safaai Deris, Mohd. Syazwan Abdullah:
Synergy network based inference for breast cancer metastasis. WCIT 2011: 1094-1100 - [i2]Ashraf A. Aly, Safaai Bin Deris, Nazar Zaki:
A Novel Image Segmentation Enhancement Technique based on Active Contour and Topological Alignments. CoRR abs/1106.0371 (2011) - [i1]Mamoun M. Jamous, Safaai Bin Deris:
Web Services Non-Functional Classification to Enhance Discovery Speed. CoRR abs/1112.3725 (2011) - 2010
- [j17]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
Particle swarm optimization with a modified sigmoid function for gene selection from gene expression data. Artif. Life Robotics 15(1): 21-24 (2010) - [c32]Shahreen Kasim, Safaai Deris, Razib M. Othman:
A New Computational Framework for Gene Expression Clustering. ADMA (1) 2010: 603-610 - [c31]Mohd Saberi Mohamad, Sigeru Omatu, Michifumi Yoshioka, Safaai Deris:
Selecting Genes from Gene Expression Data by using an Enhancement of Binary Particle Swarm Optimization for Cancer Classification. ICAART (1) 2010: 82-89 - [c30]Jafar Razmara, Safaai Bin Deris, Sepideh Parvizpour:
Protein Structure Modeling in Two-Level Topology Strings for Structure Comparison. SITIS 2010: 309-314
2000 – 2009
- 2009
- [j16]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Muhammad Faiz Misman, Michifumi Yoshioka:
A multi-objective strategy in genetic algorithms for gene selection of gene expression data. Artif. Life Robotics 13(2): 410-413 (2009) - [j15]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Muhammad Faiz Misman, Michifumi Yoshioka:
Selecting informative genes from microarray data by using hybrid methods for cancer classification. Artif. Life Robotics 13(2): 414-417 (2009) - [j14]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
Gene subset selection using an iterative approach based on genetic algorithms. Artif. Life Robotics 14(1): 12-15 (2009) - [j13]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
Particle swarm optimization for gene selection in classifying cancer classes. Artif. Life Robotics 14(1): 16-19 (2009) - [c29]Shahliza Abd Halim, Dayang Norhayati Abang Jawawi, Safaai Deris:
Requirements Identification and Representation in Software Product Line. APSEC 2009: 340-346 - [c28]Noraini Ibrahim, Wan M. N. Wan-Kadir, Safaai Deris:
Propagating Requirement Change into Software High Level Designs towards Resilient Software Evolution. APSEC 2009: 347-354 - [c27]Umi Kalsom Yusof, Safaai Deris:
Constraint-Based Genetic Algorithms for Machine Requirement of Semiconductor Assembly Industry: A Proposed Framework. Asia International Conference on Modelling and Simulation 2009: 29-34 - [c26]Ho Sheau Fen Irene, Safaai Deris, Siti Zaiton Mohd Hashim:
University course timetable planning using hybrid particle swarm optimization. GEC Summit 2009: 239-246 - [c25]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
An Iterative GASVM-Based Method: Gene Selection and Classification of Microarray Data. IWANN (2) 2009: 187-194 - [c24]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka, Anazida Zainal:
An Improved Binary Particle Swarm Optimisation for Gene Selection in Classifying Cancer Classes. IWANN (2) 2009: 495-502 - [c23]Jafar Razmara, Safaai Bin Deris, Sepideh Parvizpour:
Text-Based Protein Structure Modeling for Structure Comparison. SoCPaR 2009: 490-496 - 2008
- [j12]Ku Ruhana Ku-Mahamud, Norita Md Norwawi, Norliza Katuk, Safaai Deris:
Autonomous Notification and Situation Reporting for Flood Disaster Management. Comput. Inf. Sci. 1(3): 20-26 (2008) - [j11]Razib M. Othman, Safaai Deris, Rosli Md. Illias:
A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences. J. Biomed. Informatics 41(1): 65-81 (2008) - [c22]Mohd Saberi Mohamad, Sigeru Omatu, Michifumi Yoshioka, Safaai Deris:
An Approach Using Hybrid Methods to Select Informative Genes from Microarray Data for Cancer Classification. Asia International Conference on Modelling and Simulation 2008: 603-608 - [c21]Jafar Razmara, Safaai Bin Deris:
A novel method for protein 3D-structure similarity measure based on n-gram modeling. BIBE 2008: 1-6 - [c20]Noraini Ibrahim, Wan M. N. Wan-Kadir, Safaai Deris:
Comparative Evaluation of Change Propagation Approaches towards Resilient Software Evolution. ICSEA 2008: 198-204 - [c19]Anjum Iqbal, Mohd Aizaini Maarof, Safaai Deris:
The Concept of Bio-fitness in Bio-inspired Computational Metaphor Abstraction. IMTIC 2008: 215-226 - [c18]Muhammad Firdaus Mustapha, Safaai Bin Deris:
Rescheduling for Manufacturing Based on Ontology and Problem Solving Method. ISDA (2) 2008: 444-449 - [c17]Suhaila Zainudin, Safaai Deris:
Combining Clustering and Bayesian Network for Gene Network Inference. ISDA (2) 2008: 557-563 - [c16]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka:
A Recursive Genetic Algorithm to Automatically Select Genes for Cancer Classification. IWPACBB 2008: 166-174 - [c15]Dayang N. A. Jawawi, Safaai Deris, Rosbi Bin Mamat:
Early-Life Cycle Reuse Approach for Component-Based Software of Autonomous Mobile Robot System. SNPD 2008: 263-268 - 2007
- [j10]Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Siti Zaiton Mohd Hashim:
A model for gene selection and classification of gene expression data. Artif. Life Robotics 11(2): 219-222 (2007) - [j9]Dayang N. A. Jawawi, Safaai Deris, Rosbi Bin Mamat:
Software Reuse for Mobile Robot Applications Through Analysis Patterns. Int. Arab J. Inf. Technol. 4(3): 220-228 (2007) - [j8]Radziah Mohamad, Safaai Deris, Hany H. Ammar:
Pattern-Oriented Design for Multi-Agent System: A Conceptual Model. J. Object Technol. 6(4): 55-75 (2007) - [c14]Nazar M. Zaki, Safaai Deris, Saleh Alwahaishi:
SubSS: A Protein-Protein Interaction Detection Tool. ACIS-ICIS 2007: 999-1004 - [c13]Saad Osman Abdalla Subair, Safaai Deris:
Blind Test Is A Pragmatic Test for A New Protein Secondary Structure Classifier. BIOCOMP 2007: 355-361 - [c12]Suhaila Zainudin, Safaai Deris:
Towards Evaluation of Inferred Gene Network. ICCSA Workshops 2007: 57-64 - 2006
- [c11]Saad Osman Abdalla Subair, Safaai Deris:
Protein Secondary Structure Reduction Methods Significantly Affect Prediction Accuracy. AICCSA 2006: 296-299 - [c10]Radziah Mohamad, Safaai Deris, Hany H. Ammar:
Agent Design Patterns Framework for MaSE/POAD Methodology. AICCSA 2006: 521-528 - [c9]Dayang N. A. Jawawi, Safaai Deris, Rosbi Bin Mamat:
Enhancements of PECOS Embedded Real-Time Component Model for Autonomous Mobile Robot Application. AICCSA 2006: 882-889 - [c8]Saad Osman Abdalla Subair, Safaai Deris:
Protein Secondary Structure Prediction Accuracy versus Reduction Methods. CDES 2006: 118-124 - [c7]Suhaila Zainudin, Safaai Deris:
Towards estimating gene network using structure learning. Computational Intelligence 2006: 436-441 - [c6]Norliza Katuk, Ku Ruhana Ku-Mahamud, Norita Md Norwawi, Safaai Deris:
Web-Based Support System for Flood Response Operation. IAT Workshops 2006: 169-171 - [c5]Radziah Mohamad, Safaai Deris, Hany H. Ammar:
Pattern-Oriented Design for Multi-Agent System : A Process Framework. Software Engineering Research and Practice 2006: 350-356 - 2005
- [j7]Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias:
A Hybrid of Genetic Algorithm and Support Vector Machine for Features Selection and Classification of Gene Expression Microarray. Int. J. Comput. Intell. Appl. 5(1): 91-108 (2005) - [j6]Saad Osman Abdalla Subair, Safaai Deris:
Combining Artificial Neural Networks and GOR-V Information Theory to Predict Protein Secondary Structure from Amino Acid Sequences. Int. J. Intell. Inf. Technol. 1(4): 53-72 (2005) - [c4]Hany H. Ammar, Safaai Deris, Radziah Mohamad:
Towards a Reusable and Maintainable Multiagent System Engineering (MaSE) Methodology. IC-AI 2005: 520-526 - [c3]Nazar M. Zaki, Safaai Deris:
Combining Three Scoring Algorithms for Representing Protein Sequence. IC-AI 2005: 839-845 - 2004
- [j5]Nazar M. Zaki, Safaai Deris, Rosli Md. Illias:
Features Extraction For Protein Homology Detection Using Hidden Markov Models Combining Scores. Int. J. Comput. Intell. Appl. 4(1): 1-12 (2004) - 2002
- [j4]Puteh Saad, Siti Mariyam Hj. Shamsuddin, Safaai Deris, Dzulkifli Bin Mohamad:
Rough Set on Trademark Images for Neural Network Classifier. Int. J. Comput. Math. 79(7): 789-796 (2002) - 2000
- [j3]Safaai Deris, Sigeru Omatu, Hiroshi Ohta:
Timetable planning using the constraint-based reasoning. Comput. Oper. Res. 27(9): 819-840 (2000)
1990 – 1999
- 1999
- [j2]Safaai Deris, Sigeru Omatu, Hiroshi Ohta, Shaharudin Kutar, Pathiah Abd Samat:
Ship maintenance scheduling by genetic algorithm and constraint-based reasoning. Eur. J. Oper. Res. 112(3): 489-502 (1999) - 1997
- [j1]Safaai Deris, Sigeru Omatu, Hiroshi Ohta, Pathiah Abd Samat:
Object-oriented constraint logic programming for timetable planning. Int. J. Syst. Sci. 28(10): 987-999 (1997) - [c2]Safaai Deris, Sigeru Omatu, Hiroshi Ohta, Puteh Saad:
A Constraint-Directed Genetic Algorithm for University Timetable Planning. ICONIP (1) 1997: 477-480 - 1996
- [c1]Sigeru Omatu, Safaai Deris:
Stabilization of Inverted Pendulum by the Genetic Algorithm. International Conference on Evolutionary Computation 1996: 700-705
Coauthor Index
[j44] [j43] [j42] [j40] [c70] [j39] [j38] [j36] [c69] [c68] [j34] [j33] [c67] [c66] [c65] [j32] [j31] [j30] [j29] [j28] [j27] [j26] [c64] [c63] [j24] [c59] [c58] [c57] [c56] [c55] [c54] [c53] [c52] [c51] [c50] [c49] [c48] [c47] [c46] [c45] [c44] [c43] [j20] [c42] [c41] [c40] [c39] [c38] [j18] [c35] [c34] [j17] [c31] [j16] [j15] [j14] [j13] [c25] [c24] [c22] [c16] [j10] [j7]
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