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ORCIDMikhail G. Dozmorov
Person information
- affiliation: Virginia Commonwealth University, Department of Biostatistics, Richmond, VA, USA
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2020 – today
- 2024
[i1]Brydon P. G. Wall, My Nguyen, J. Chuck Harrell, Mikhail G. Dozmorov:
Machine and deep learning methods for predicting 3D genome organization. CoRR abs/2403.03231 (2024)- 2023
- [j27]Jonathan D. Ogata, Wancen Mu, Eric S. Davis
, Bingjie Xue, J. Chuck Harrell, Nathan C. Sheffield, Douglas H. Phanstiel, Michael I. Love, Mikhail G. Dozmorov:
excluderanges: exclusion sets for T2T-CHM13, GRCm39, and other genome assemblies. Bioinform. 39(4) (2023) - [j26]Eric S. Davis, Wancen Mu, Stuart Lee, Mikhail G. Dozmorov, Michael I. Love, Douglas H. Phanstiel:
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling. Bioinform. 39(5) (2023) - [j25]Wancen Mu, Eric S. Davis, Stuart Lee, Mikhail G. Dozmorov, Douglas H. Phanstiel, Michael I. Love:
bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing. Bioinform. 39(5) (2023) - 2022
- [j24]Spiro C. Stilianoudakis, Maggie A. Marshall, Mikhail G. Dozmorov:
preciseTAD: a transfer learning framework for 3D domain boundary prediction at base-pair resolution. Bioinform. 38(3): 621-630 (2022) - 2020
- [j23]Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov:
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering. BMC Bioinform. 21(1): 319 (2020) - [j22]Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov:
Correction to: SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering. BMC Bioinform. 21(1): 373 (2020) - [j21]Mikhail G. Dozmorov, Kellen Garrison Cresswell, Silviu-Alin Bacanu, Carl F. Craver, Mark Reimers, Kenneth S. Kendler:
A method for estimating coherence of molecular mechanisms in major human disease and traits. BMC Bioinform. 21(1): 473 (2020)
2010 – 2019
- 2019
- [j20]Mikhail G. Dozmorov:
Disease classification: from phenotypic similarity to integrative genomics and beyond. Briefings Bioinform. 20(5): 1769-1780 (2019) - [j19]John C. Stansfield, Kellen Garrison Cresswell, Mikhail G. Dozmorov:
multiHiCcompare: joint normalization and comparative analysis of complex Hi-C experiments. Bioinform. 35(17): 2916-2923 (2019) - 2018
- [j18]John C. Stansfield, Kellen Garrison Cresswell, Vladimir I. Vladimirov, Mikhail G. Dozmorov:
HiCcompare: an R-package for joint normalization and comparison of HI-C datasets. BMC Bioinform. 19(1): 279:1-279:10 (2018) - 2017
- [j17]Mikhail G. Dozmorov:
Epigenomic annotation-based interpretation of genomic data: from enrichment analysis to machine learning. Bioinform. 33(20): 3323-3330 (2017) - [j16]Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar:
Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 18(14): 498:1-498:5 (2017) - 2016
- [j15]Mikhail G. Dozmorov, Lukas R. Cara, Cory B. Giles, Jonathan D. Wren:
GenomeRunner web server: regulatory similarity and differences define the functional impact of SNP sets. Bioinform. 32(15): 2256-2263 (2016) - [j14]Edmund R. Glass, Mikhail G. Dozmorov:
Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold. BMC Bioinform. 17(S-13): 334 (2016) - [j13]Jonathan D. Wren, Inimary T. Toby, Huxiao Hong, Bindu Nanduri, Rakesh Kaundal, Mikhail G. Dozmorov, Shraddha Thakkar:
Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 17(S-13): 356 (2016) - 2015
- [j12]Mikhail G. Dozmorov, Indra Adrianto, Cory B. Giles, Edmund R. Glass, Stuart B. Glenn, Courtney Montgomery, Kathy L. Sivils, Lorin E. Olson, Tomoaki Iwayama, Willard M. Freeman, Christopher J. Lessard, Jonathan D. Wren:
Detrimental effects of duplicate reads and low complexity regions on RNA- and ChIP-seq data. BMC Bioinform. 16(S13): S10 (2015) - 2014
- [j11]Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Andy D. Perkins, Chaoyang Zhang, Peter Hoyt, Rakesh Kaundal:
Proceedings of the 2014 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 15(S-11): I1 (2014) - 2013
- [j10]Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Rakesh Kaundal, Andy D. Perkins, Edward J. Perkins, Doris M. Kupfer, Gordon K. Springer:
Proceedings of the 2013 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 14(S-14): S1 (2013) - [j9]Cory B. Giles, Reshmi Girijadevi, Mikhail G. Dozmorov, Jonathan D. Wren:
mirCoX: a database of miRNA-mRNA expression correlations derived from RNA-seq meta-analysis. BMC Bioinform. 14(S-14): S17 (2013) - [j8]Mikhail G. Dozmorov, Cory B. Giles, Kristi A. Koelsch, Jonathan D. Wren:
Systematic classification of non-coding RNAs by epigenomic similarity. BMC Bioinform. 14(S-14): S2 (2013) - 2012
- [j7]Mikhail G. Dozmorov, Lukas R. Cara, Cory B. Giles, Jonathan D. Wren:
GenomeRunner: automating genome exploration. Bioinform. 28(3): 419-420 (2012) - [j6]Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Rakesh Kaundal, Susan Bridges, Doris M. Kupfer:
Proceedings of the 2012 MidSouth computational biology and bioinformatics society (MCBIOS) conference. BMC Bioinform. 13(S-15): S1 (2012) - 2011
- [j5]Jonathan D. Wren, Doris M. Kupfer, Edward J. Perkins, Susan Bridges, Stephen Winters-Hilt, Mikhail G. Dozmorov, Ulisses M. Braga-Neto:
Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 12(S-10): S1 (2011) - [j4]Mikhail G. Dozmorov, Cory B. Giles, Jonathan D. Wren:
Predicting gene ontology from a global meta-analysis of 1-color microarray experiments. BMC Bioinform. 12(S-10): S14 (2011) - [j3]Mikhail G. Dozmorov, Jonathan D. Wren:
High-throughput processing and normalization of one-color microarrays for transcriptional meta-analyses. BMC Bioinform. 12(S-10): S2 (2011)
2000 – 2009
- 2008
- [j2]Mikhail G. Dozmorov, Kimberly D. Kyker, Paul J. Hauser, Ricardo Saban, David D. Buethe, Igor Dozmorov, Michael Centola, Daniel J. Culkin, Robert E. Hurst:
From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells. BMC Bioinform. 9(S-9) (2008) - 2007
- [j1]Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Saban, Nathan Shankar, Arto S. Baghdayan, Michael Centola, Robert E. Hurst:
Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis. BMC Bioinform. 8(S-7) (2007)
Coauthor Index
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