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Xinan Yang
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2020 – today
- 2023
- [j27]Mohammad Abdollahi
, Xinan Yang, Moncef Ilies Nasri, Michael Fairbank
:
Demand management in time-slotted last-mile delivery via dynamic routing with forecast orders. Eur. J. Oper. Res. 309(2): 704-718 (2023) - [c4]Abdullahi Mohammed Jingi, Xinan Yang:
Robot-Assisted Delivery Problems and Their Exact Solutions. OLA 2023: 341-353 - 2021
- [j26]Xinan Yang
, Hajem A. Daham, Abdellah Salhi:
Combined strip and discharge delivery of containers in heterogeneous fleets with time windows. Comput. Oper. Res. 127: 105141 (2021) - [j25]Eghbal Hosseini
, Ali Safaa Sadiq
, Kayhan Zrar Ghafoor
, Danda B. Rawat
, Mehrdad Saif
, Xinan Yang:
Volcano eruption algorithm for solving optimization problems. Neural Comput. Appl. 33(7): 2321-2337 (2021) - 2020
- [j24]Xinan Yang, Hajem A. Daham
:
A column generation-based decomposition and aggregation approach for combining orders in inland transportation of containers. OR Spectr. 42(1): 261-296 (2020) - [j23]Xiangying Sun, Zhezhen Wang
, Johnathon M. Hall
, Carlos Perez-Cervantes
, Alexander J. Ruthenburg
, Ivan P. Moskowitz
, Michael Gribskov
, Xinan Holly Yang
:
Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq. PLoS Comput. Biol. 16(2) (2020)
2010 – 2019
- 2019
- [j22]Abdellah Salhi, Ghazwan Alsoufi, Xinan Yang:
An evolutionary approach to a combined mixed integer programming model of seaside operations as arise in container ports. Ann. Oper. Res. 272(1-2): 69-98 (2019) - [i1]Xinan Yang, Nikolaos Thomos:
A rolling-horizon dynamic programming approach for collaborative caching. CoRR abs/1907.13516 (2019) - 2018
- [j21]Zhezhen Wang
, John M. Cunningham, Xinan Holly Yang
:
CisPi: a transcriptomic score for disclosing cis-acting disease-associated lincRNAs. Bioinform. 34(17): i664-i670 (2018) - [j20]Ghazwan Alsoufi, Xinan Yang, Abdellah Salhi:
Combined quay crane assignment and quay crane scheduling with crane inter-vessel movement and non-interference constraints. J. Oper. Res. Soc. 69(3): 372-383 (2018) - 2017
- [j19]Xinan Holly Yang
, Fangming Tang, Jisu Shin, John M. Cunningham:
Incorporating genomic, transcriptomic and clinical data: a prognostic and stem cell-like MYC and PRC imbalance in high-risk neuroblastoma. BMC Syst. Biol. 11(S-5): 92:1-92:17 (2017) - [j18]Xinan Yang, Arne K. Strauss
:
An approximate dynamic programming approach to attended home delivery management. Eur. J. Oper. Res. 263(3): 935-945 (2017) - [j17]Hajem A. Daham
, Xinan Yang
, Michaela K. Warnes:
An efficient mixed integer programming model for pairing containers in inland transportation based on the assignment of orders. J. Oper. Res. Soc. 68(6): 678-694 (2017) - 2016
- [j16]Xinan Yang
, Alexei Vernitski, Laura Carrea
:
An approximate dynamic programming approach for improving accuracy of lossy data compression by Bloom filters. Eur. J. Oper. Res. 252(3): 985-994 (2016) - [j15]Xinan Yang
, Arne K. Strauss
, Christine S. M. Currie
, Richard W. Eglese
:
Choice-Based Demand Management and Vehicle Routing in E-Fulfillment. Transp. Sci. 50(2): 473-488 (2016) - [c3]Ghazwan Alsoufi, Xinan Yang
, Abdellah Salhi:
Robust Berth Allocation Using a Hybrid Approach Combining Branch-and-Cut and the Genetic Algorithm. HM 2016: 187-201 - 2015
- [j14]Bin Wang, John M. Cunningham, Xinan Holly Yang
:
Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data. Bioinform. 31(18): 3043-3045 (2015) - [j13]Xinan Yang
, Meiyi Li
, Bin Wang, Wanqi Zhu, Aurelie Desgardin, Kenan Onel, Jill de Jong, Jianjun Chen
, Luonan Chen, John M. Cunningham:
Systematic computation with functional gene-sets among leukemic and hematopoietic stem cells reveals a favorable prognostic signature for acute myeloid leukemia. BMC Bioinform. 16: 97:1-97:21 (2015) - 2013
- [j12]Younghee Lee, Haiquan Li
, Jianrong Li, Ellen Rebman, Ikbel Achour, Kelly Regan
, Eric R. Gamazon
, James L. Chen, Xinan Holly Yang, Nancy J. Cox, Yves A. Lussier
:
Research and applications: Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases. J. Am. Medical Informatics Assoc. 20(4): 619-629 (2013) - 2012
- [j11]Andreas Grothey, Xinan Yang
:
Approximate dynamic programming with Bézier Curves/Surfaces for Top-percentile Traffic Routing. Eur. J. Oper. Res. 218(3): 698-707 (2012) - [j10]Xinan Yang
, Kelly Regan
, Yong Huang, Qingbei Zhang, Jianrong Li, Tanguy Y. Seiwert, Ezra E. W. Cohen, H. Rosie Xing, Yves A. Lussier
:
Single Sample Expression-Anchored Mechanisms Predict Survival in Head and Neck Cancer. PLoS Comput. Biol. 8(1) (2012) - [c2]Xinan Yang, Haiquan Li, Kelly Regan, Jianrong Li, Yong Huang, H. Rosie Xing, Yves A. Lussier:
Towards Mechanism Classifiers: Expression-anchored Gene Ontology Signature Predicts Clinical Outcome in Lung Adenocarcinoma Patients. AMIA 2012 - 2011
- [j9]Xinan Yang
, Jianrong Li, Younghee Lee, Yves A. Lussier
:
GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns. Bioinform. 27(10): 1444-1446 (2011) - 2010
- [j8]Xinan Yang
, Younghee Lee, Yong Huang, James L. Chen, H. Rosie Xing, Yves A. Lussier
:
Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models. BMC Bioinform. 11(S-9): S11 (2010) - [j7]Xinan Yang, Yong Huang, Matthew G. Crowson
, Jianrong Li, Michael L. Maitland, Yves A. Lussier
:
Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data. J. Biomed. Informatics 43(3): 376-384 (2010) - [j6]Younghee Lee, Xinan Yang
, Yong Huang, Hanli Fan, Qingbei Zhang, Youngfei Wu, Jianrong Li, Rifat Hasina, Chao Cheng, Mark W. Lingen, Mark B. Gerstein, Ralph R. Weichselbaum, H. Rosie Xing, Yves A. Lussier
:
Network Modeling Identifies Molecular Functions Targeted by miR-204 to Suppress Head and Neck Tumor Metastasis. PLoS Comput. Biol. 6(4) (2010)
2000 – 2009
- 2009
- [j5]Xinan Yang, Yong Huang, James L. Chen, Jianming Xie, Xiao Sun, Yves A. Lussier
:
Mechanism-anchored profiling derived from epigenetic networks predicts outcome in acute lymphoblastic leukemia. BMC Bioinform. 10(S-9): 6 (2009) - [c1]Xin Ma, Jiansheng Wu, Hongde Liu, Xinan Yang, Jianming Xie, Xiao Sun:
SVM-Based Approach for Predicting DNA-Binding Residues in Proteins from Amino Acid Sequences. IJCBS 2009: 225-229 - 2008
- [j4]Xinan Yang, Xiao Sun, Jianming Xie, Zuhong Lu:
Comparability of gene expression in human blood, immune and carcinoma cells. Appl. Math. Comput. 205(1): 178-184 (2008) - 2007
- [j3]Xinan Yang
, Xiao Sun:
Meta-analysis of several gene lists for distinct types of cancer: A simple way to reveal common prognostic markers. BMC Bioinform. 8 (2007) - 2006
- [j2]Claudio Lottaz, Xinan Yang
, Stefanie Scheid
, Rainer Spang
:
OrderedList - a bioconductor package for detecting similarity in ordered gene lists. Bioinform. 22(18): 2315-2316 (2006) - [j1]Xinan Yang, Stefan Bentink, Stefanie Scheid
, Rainer Spang
:
Similarities of Ordered Gene Lists. J. Bioinform. Comput. Biol. 4(3): 693-708 (2006)
Coauthor Index
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