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Doruk Bozdag
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2010 – 2019
- 2013
- [j8]Ayat Hatem, Doruk Bozdag, Amanda E. Toland
, Ümit V. Çatalyürek
:
Benchmarking short sequence mapping tools. BMC Bioinform. 14: 184 (2013) - 2012
- [j7]Erik Saule
, Doruk Bozdag, Ümit V. Çatalyürek
:
Optimizing the stretch of independent tasks on a cluster: From sequential tasks to moldable tasks. J. Parallel Distributed Comput. 72(4): 489-503 (2012) - 2011
- [c14]Ayat Hatem, Doruk Bozdag, Ümit V. Çatalyürek
:
Benchmarking Short Sequence Mapping Tools. BIBM 2011: 109-113 - 2010
- [j6]Doruk Bozdag, Ümit V. Çatalyürek
, Assefaw H. Gebremedhin, Fredrik Manne, Erik G. Boman, Füsun Özgüner:
Distributed-Memory Parallel Algorithms for Distance-2 Coloring and Related Problems in Derivative Computation. SIAM J. Sci. Comput. 32(4): 2418-2446 (2010) - [c13]Doruk Bozdag, Ashwin S. Kumar, Ümit V. Çatalyürek
:
Comparative analysis of biclustering algorithms. BCB 2010: 265-274 - [c12]Doruk Bozdag, Ayat Hatem, Ümit V. Çatalyürek
:
Exploring parallelism in short sequence mapping using Burrows-Wheeler Transform. IPDPS Workshops 2010: 1-8 - [c11]Erik Saule, Doruk Bozdag, Ümit V. Çatalyürek
:
A Moldable Online Scheduling Algorithm and Its Application to Parallel Short Sequence Mapping. JSSPP 2010: 93-109
2000 – 2009
- 2009
- [j5]Ümit V. Çatalyürek
, Erik G. Boman, Karen D. Devine, Doruk Bozdag, Robert T. Heaphy, Lee Ann Riesen:
A repartitioning hypergraph model for dynamic load balancing. J. Parallel Distributed Comput. 69(8): 711-724 (2009) - [j4]Doruk Bozdag, Füsun Özgüner, Ümit V. Çatalyürek
:
Compaction of Schedules and a Two-Stage Approach for Duplication-Based DAG Scheduling. IEEE Trans. Parallel Distributed Syst. 20(6): 857-871 (2009) - [c10]Doruk Bozdag, Jeffrey D. Parvin, Ümit V. Çatalyürek
:
A Biclustering Method to Discover Co-regulated Genes Using Diverse Gene Expression Datasets. BICoB 2009: 151-163 - [c9]Hatice Gulcin Ozer, Doruk Bozdag, Terry Camerlengo, Jiejun Wu, Yi-Wen Huang, Timothy D. R. Hartley, Jeffrey D. Parvin, Tim Hui-Ming Huang, Ümit V. Çatalyürek
, Kun Huang:
A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments. BICoB 2009: 320-330 - [c8]Doruk Bozdag, Catalin C. Barbacioru, Ümit V. Çatalyürek
:
Parallel short sequence mapping for high throughput genome sequencing. IPDPS 2009: 1-10 - [i1]Doruk Bozdag, Catalin C. Barbacioru, Ümit V. Çatalyürek:
Parallelization of Mapping Algorithms for Next Generation Sequencing Applications. Combinatorial Scientific Computing 2009 - 2008
- [j3]Doruk Bozdag, Assefaw Hadish Gebremedhin, Fredrik Manne, Erik G. Boman, Ümit V. Çatalyürek
:
A framework for scalable greedy coloring on distributed-memory parallel computers. J. Parallel Distributed Comput. 68(4): 515-535 (2008) - 2007
- [c7]Ümit V. Çatalyürek
, Erik G. Boman, Karen D. Devine, Doruk Bozdag, Robert T. Heaphy, Lee Ann Riesen:
Hypergraph-based Dynamic Load Balancing for Adaptive Scientific Computations. IPDPS 2007: 1-11 - 2006
- [j2]Eylem Ekici
, Yaoyao Gu, Doruk Bozdag:
Mobility-based communication in wireless sensor networks. IEEE Commun. Mag. 44(7): 56-62 (2006) - [j1]Yaoyao Gu, Doruk Bozdag, Robert W. Brewer, Eylem Ekici
:
Data harvesting with mobile elements in wireless sensor networks. Comput. Networks 50(17): 3449-3465 (2006) - [c6]Doruk Bozdag, Ümit V. Çatalyürek
, Füsun Özgüner:
A task duplication based bottom-up scheduling algorithm for heterogeneous environments. IPDPS 2006 - [c5]Yaoyao Gu, Doruk Bozdag, Eylem Ekici
:
Mobile Element Based Differentiated Message Delivery in Wireless Sensor Networks. WOWMOM 2006: 83-92 - 2005
- [c4]Erik G. Boman, Doruk Bozdag, Ümit V. Çatalyürek, Assefaw Hadish Gebremedhin, Fredrik Manne:
A Scalable Parallel Graph Coloring Algorithm for Distributed Memory Computers. Euro-Par 2005: 241-251 - [c3]Doruk Bozdag, Ümit V. Çatalyürek, Assefaw Hadish Gebremedhin, Fredrik Manne, Erik G. Boman, Füsun Özgüner:
A Parallel Distance-2 Graph Coloring Algorithm for Distributed Memory Computers. HPCC 2005: 796-806 - [c2]Doruk Bozdag, Füsun Özgüner, Eylem Ekici
, Ümit V. Çatalyürek
:
A Task Duplication Based Scheduling Algorithm Using Partial Schedules. ICPP 2005: 630-637 - [c1]Yaoyao Gu, Doruk Bozdag, Eylem Ekici
, Füsun Özgüner, Chang-Gun Lee:
Partitioning based mobile element scheduling in wireless sensor networks. SECON 2005: 386-395
Coauthor Index
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