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Michael R. Crusoe
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2020 – today
- 2023
- [c4]Carole A. Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Ignacio Eguinoa, Bert Droesbeke, Hervé Ménager, Laura Rodríguez-Navas, José María Fernández, Björn A. Grüning, Simone Leo, Luca Pireddu, Michael R. Crusoe, Johan Gustafsson, Salvador Capella-Gutiérrez, Frederik Coppens:
The EOSC-Life Workflow Collaboratory for the Life Sciences. CoRDI 2023 - [i12]Rafael Ferreira da Silva, Rosa M. Badia, Venkat Bala, Debbie Bard, Peer-Timo Bremer, Ian Buckley, Silvina Caíno-Lores, Kyle Chard, Carole A. Goble, Shantenu Jha, Daniel S. Katz, Daniel E. Laney, Manish Parashar, Frédéric Suter, Nick Tyler, Thomas D. Uram, Ilkay Altintas, Stefan Andersson, William Arndt, Juan Aznar, Jonathan Bader, Bartosz Balis, Chris Blanton, Kelly Rosa Braghetto, Aharon Brodutch, Paul Brunk, Henri Casanova, Alba Cervera-Lierta, Justin Chigu, Tainã Coleman, Nick Collier, Iacopo Colonnelli, Frederik Coppens, Michael R. Crusoe, Will Cunningham, Bruno de Paula Kinoshita, Paolo Di Tommaso, Charles M. Doutriaux, Matthew Downton, Wael R. Elwasif, Bjoern Enders, Chris Erdmann, Thomas Fahringer, Ludmilla Figueiredo, Rosa Filgueira, Martin Foltin, Anne Fouilloux, Luiz Gadelha, Andy Gallo, Artur García-Sáez, et al.:
Workflows Community Summit 2022: A Roadmap Revolution. CoRR abs/2304.00019 (2023) - [i11]Simone Leo, Michael R. Crusoe, Laura Rodríguez-Navas, Raül Sirvent, Alexander Kanitz, Paul De Geest, Rudolf Wittner, Luca Pireddu, Daniel Garijo, José M. Fernández, Iacopo Colonnelli, Matej Gallo, Tazro Ohta, Hirotaka Suetake, Salvador Capella-Gutiérrez, Renske de Wit, Bruno de Paula Kinoshita, Stian Soiland-Reyes:
Recording provenance of workflow runs with RO-Crate. CoRR abs/2312.07852 (2023) - 2022
- [j7]Michael R. Crusoe, Sanne Abeln, Alexandru Iosup, Peter Amstutz, John Chilton, Nebojsa Tijanic, Hervé Ménager, Stian Soiland-Reyes, Bogdan Gavrilovic, Carole A. Goble, The Cwl Community:
Methods included. Commun. ACM 65(6): 54-63 (2022) - [j6]Enis Afgan, Anton Nekrutenko, Björn A. Grüning, Daniel J. Blankenberg, Jeremy Goecks, Michael C. Schatz, Alexander E. Ostrovsky, Alexandru Mahmoud, Andrew J. Lonie, Anna Syme, Anne Fouilloux, Anthony Bretaudeau, Anup Kumar, Arthur C. Eschenlauer, Assunta D. Desanto, Aysam Guerler, Beatriz Serrano-Solano, Bérénice Batut, Bradley W. Langhorst, Bridget Carr, Bryan A. Raubenolt, Cameron J. Hyde, Catherine J. Bromhead, Christopher B. Barnett, Coline Royaux, Cristóbal Gallardo, Daniel J. Fornika, Dannon Baker, Dave Bouvier, Dave Clements, David A. de Lima Morais, David Lopez Tabernero, Delphine Larivière, Engy Nasr, Federico Zambelli, Florian Heyl, Fotis E. Psomopoulos, Frederik Coppens, Gareth R. Price, Gianmauro Cuccuru, Gildas Le Corguillé, Gregory Von Kuster, Gulsum Gudukbay, Helena Rasche, Hans-Rudolf Hotz, Ignacio Eguinoa, Igor V. Makunin, Isuru Ranawaka, James Taylor, Jayadev Joshi, Jennifer Hillman-Jackson, John Chilton, Kaivan Kamali, Keith Suderman, Krzysztof Poterlowicz, Yvan Le Bras, Lucille Lopez-Delisle, Luke Sargent, Madeline E. Bassetti, Marco Antonio Tangaro, Marius van den Beek, Martin Cech, Matthias Bernt, Matthias Fahrner, Mehmet Tekman, Melanie Christine Föll, Michael R. Crusoe, Miguel Roncoroni, Natalie Kucher, Nate Coraor, Nicholas Stoler, Nick Rhodes, Nicola Soranzo, Niko Pinter, Nuwan Goonasekera, Pablo A. Moreno, Pavankumar Videm, Petera Melanie, Pietro Mandreoli, Pratik D. Jagtap, Qiang Gu, Ralf J. M. Weber, Ross Lazarus, Ruben H. P. Vorderman, Saskia D. Hiltemann, Sergey Golitsynskiy, Shilpa Garg, Simon A. Bray, Simon L. Gladman, Simone Leo, Subina P. Mehta, Timothy J. Griffin, Vahid Jalili, Yves Vandenbrouck, Victor Wen, Vijay K. Nagampalli, Wendi A. Bacon, Willem L. De Koning, Wolfgang Maier, Peter J. Briggs:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. Nucleic Acids Res. 50(W1): 345-351 (2022) - 2021
- [i10]Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Dan Laney, Dong H. Ahn, Shantenu Jha, Carole A. Goble, Lavanya Ramakrishnan, J. Luc Peterson, Bjoern Enders, Douglas Thain, Ilkay Altintas, Yadu N. Babuji, Rosa M. Badia, Vivien Bonazzi, Tainã Coleman, Michael R. Crusoe, Ewa Deelman, Frank Di Natale, Paolo Di Tommaso, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Alex Ganose, Björn A. Grüning, Daniel S. Katz, Olga A. Kuchar, Ana Kupresanin, Bertram Ludäscher, Ketan Maheshwari, Marta Mattoso, Kshitij Mehta, Todd S. Munson, Jonathan Ozik, Tom Peterka, Loic Pottier, Tim Randles, Stian Soiland-Reyes, Benjamín Tovar, Matteo Turilli, Thomas D. Uram, Karan Vahi, Michael Wilde, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Bringing the Scientific Workflows Community Together. CoRR abs/2103.09181 (2021) - [i9]Michael R. Crusoe, Sanne Abeln, Alexandru Iosup, Peter Amstutz, John Chilton, Nebojsa Tijanic, Hervé Ménager, Stian Soiland-Reyes, Carole A. Goble:
Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language. CoRR abs/2105.07028 (2021) - [i8]Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Tainã Coleman, Dan Laney, Dong H. Ahn, Shantenu Jha, Dorran Howell, Stian Soiland-Reyes, Ilkay Altintas, Douglas Thain, Rosa Filgueira, Yadu N. Babuji, Rosa M. Badia, Bartosz Balis, Silvina Caíno-Lores, Scott Callaghan, Frederik Coppens, Michael R. Crusoe, Kaushik De, Frank Di Natale, Tu Mai Anh Do, Bjoern Enders, Thomas Fahringer, Anne Fouilloux, Grigori Fursin, Alban Gaignard, Alex Ganose, Daniel Garijo, Sandra Gesing, Carole A. Goble, Adil Hasan, Sebastiaan Huber, Daniel S. Katz, Ulf Leser, Douglas Lowe, Bertram Ludäscher, Ketan Maheshwari, Maciej Malawski, Rajiv Mayani, Kshitij Mehta, André Merzky, Todd S. Munson, Jonathan Ozik, Loïc Pottier, Sashko Ristov, Mehdi Roozmeh, Renan Souza, Frédéric Suter, Benjamín Tovar, Matteo Turilli, Karan Vahi, Alvaro Vidal-Torreira, Wendy R. Whitcup, Michael Wilde, Alan R. Williams, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development. CoRR abs/2106.05177 (2021) - [i7]Anna-Lena Lamprecht, Magnus Palmblad, Jon C. Ison, Veit Schwämmle, Mohammad Sadnan Al Manir, Ilkay Altintas, Christopher J. O. Baker, Ammar Ben Hadj Amor, Salvador Capella-Gutiérrez, Paulos Charonyktakis, Michael R. Crusoe, Yolanda Gil, Carole A. Goble, Timothy J. Griffin, Paul Groth, Hans Ienasescu, Pratik D. Jagtap, Matús Kalas, Vedran Kasalica, Alireza Khanteymoori, Tobias Kuhn, Hailiang Mei, Hervé Ménager, Steffen Möller, Robin A. Richardson, Vincent Robert, Stian Soiland-Reyes, Robert Stevens, Szaniszlo Szoke, Suzan Verberne, Aswin Verhoeven, Katherine Wolstencroft:
Perspectives on automated composition of workflows in the life sciences. F1000Research 10: 897 (2021) - 2020
- [j5]Carole A. Goble, Sarah Cohen-Boulakia, Stian Soiland-Reyes, Daniel Garijo, Yolanda Gil, Michael R. Crusoe, Kristian Peters, Daniel Schober:
FAIR Computational Workflows. Data Intell. 2(1-2): 108-121 (2020) - [j4]Alex L. Mitchell, Alexandre Almeida, Martin Beracochea, Miguel A. Boland, Josephine Burgin, Guy Cochrane, Michael R. Crusoe, Varsha Kale, Simon C. Potter, Lorna J. Richardson, Ekaterina A. Sakharova, Maxim Scheremetjew, Anton I. Korobeynikov, Alexander Shlemov, Olga Kunyavskaya, Alla L. Lapidus, Robert D. Finn:
MGnify: the microbiome analysis resource in 2020. Nucleic Acids Res. 48(Database-Issue): D570-D578 (2020) - [c3]Rupert W. Nash, Michael R. Crusoe, Max Kontak, Nick Brown:
Supercomputing with MPI meets the Common Workflow Language standards: an experience report. WORKS@SC 2020: 17-24 - [d12]Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Rastko Ciric, Horea Christian, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Jason Wong, Alejandro de la Vega, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, Erin Benderoff, Drew Erickson, James D. Kent, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Arman Eshaghi, Jarrod Millman, Dylan M. Nielson, Gaël Varoquaux, Aimi Watanabe, David Mordom, Matteo Mancini, Jérémy Guillon, Serge Koudoro, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross D. Markello, Ashley Gillman, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth Dupre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, David Welch, William Triplett, Ali Ghayoor, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Oliver Contier, Dale Zhou, Dmytro Bielievtsov, Gavin Cooper, Hrvoje Stojic, Janosch Linkersdörfer, Lea Waller, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Eric Condamine, Garikoitz Lerma-Usabiaga, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Robbert Harms, Sami Andberg, Zvi Baratz, K. Matsubara, Abel A. González Orozco, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Guillaume Flandin, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Michael R. Crusoe, Nicolas Pannetier, Ranjeet Khanuja, Sebastian Urchs, Thomas Nickson, William Broderick, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.5.0. Zenodo, 2020 - [d11]Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Horea Christian, Rastko Ciric, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Jason Wong, Alejandro de la Vega, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, Erin Benderoff, Drew Erickson, James D. Kent, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Arman Eshaghi, Jarrod Millman, Matteo Mancini, Dylan M. Nielson, Gaël Varoquaux, Aimi Watanabe, David Mordom, Jérémy Guillon, Serge Koudoro, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross D. Markello, Ashley Gillman, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth Dupre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, David Welch, William Triplett, Ali Ghayoor, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Oliver Contier, Dale Zhou, Dmytro Bielievtsov, Gavin Cooper, Hrvoje Stojic, Janosch Linkersdörfer, Lea Waller, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Eric Condamine, Garikoitz Lerma-Usabiaga, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Robbert Harms, Sami Andberg, Zvi Baratz, K. Matsubara, Abel A. González Orozco, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Guillaume Flandin, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Michael R. Crusoe, Nicolas Pannetier, Ranjeet Khanuja, Sebastian Urchs, Thomas Nickson, William Broderick, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.5.1. Zenodo, 2020 - [d10]Oscar Esteban, Christopher J. Markiewicz, Hans J. Johnson, Erik Ziegler, Alexandre Manhães-Savio, Dorota Jarecka, Christopher Burns, David Gage Ellis, Carlo Hämäläinen, Michael Philipp Notter, Benjamin Yvernault, Taylor Salo, Michael L. Waskom, Mathias Goncalves, Kesshi Jordan, Jason Wong, Blake E. Dewey, Cindee M. Madison, Erin Benderoff, Daniel Clark, Fred Loney, Dav Clark, Anisha Keshavan, Michael Joseph, Dylan Nielson, Michael Dayan, Marc Modat, Alexandre Gramfort, Salma Bougacha, Basile Pinsard, Shoshana Berleant, Horea Christian, Ariel Rokem, Matteo Visconti di Oleggio Castello, Yaroslav O. Halchenko, Jakub Kaczmarzyk, Gaël Varoquaux, Rastko Ciric, Brendan Moloney, Elizabeth Dupre, Serge Koudoro, Michael G. Clark, Ben Cipollini, Demian Wassermann, Jérémy Guillon, Ross D. Markello, Michael Hanke, Colin Buchanan, Rosalia Tungaraza, Ashley Gillman, Wolfgang M. Pauli, Gilles de Hollander, Sharad Sikka, Jessica Forbes, David Mordom, Shariq N. Iqbal, Matteo Mancini, Ian B. Malone, Mathieu Dubois, Yannick Schwartz, Caroline Frohlich, Alejandro Tabas, David Welch, Adam C. Richie-Halford, Steven Tilley, Aimi Watanabe, B. Nolan Nichols, Julia M. Huntenburg, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Katherine L. Bottenhorn, Chad Cumba, Benjamin T. Acland, Anibal Solon Heinsfeld, Erik K. Kastman, James D. Kent, Jens Kleesiek, Drew Erickson, Ali Ghayoor, Steven Giavasis, Alejandro de la Vega, Franz Liem, René Küttner, Martin Felipe Perez-Guevara, John A. Lee, Jarrod Millman, Jeff Lai, Dale Zhou, Christian Haselgrove, Daniel R. Glen, Mandy Renfro, Carlos Correa, Siqi Liu, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Sin Kim, Ari E. Kahn, Tristan Glatard, William Triplett, Kshitij Chawla, John Salvatore, Fernando Pérez-García, Feilong Ma, Anne Park, Hrvoje Stojic, R. Cameron Craddock, Oliver Hinds, Russell Poldrack, L. Nathan Perkins, Lukas Snoek, Andrey Chetverikov, Souheil Inati, Martin Grignard, Lucinda M. Sisk, Katrin Leinweber, Junhao WEN, Sebastian Urchs, Ross Blair, K. Matsubara, Andrew Floren, Aaron Mattfeld, Stephan Gerhard, Jörg Stadler, Gavin Cooper, Daniel Haehn, William Broderick, Sami Andberg, Maxime Noel, Matt Cieslak, Joke Durnez, Eric Condamine, Dimitri Papadopoulos Orfanos, Daniel Geisler, Benjamin Meyers, Arielle Tambini, Alejandro Weinstein, Abel A. González Orozco, Robbert Harms, Ranjeet Khanuja, Paul Sharp, Olivia Stanley, Nat Lee, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Leon Weninger, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Claire Tarbert, Brian Cheung, Andrew N. Van, Andrew Davison, Dmitry Shachnev, Miguel Molina-Romero, Simon Rothmei, Murat Bilgel, Kai Schlamp, Eduard Ort, Daniel C. McNamee, Jaime Arias, Dmytro Bielievtsov, Christopher John Steele, Lijie Huang, Ivan Gonzalez, Joshua D. Warner, Daniel S. Margulies, Oliver Contier, Ana Marina, Victor Saase, Thomas Nickson, Jan Varada, Isaac Schwabacher, John Pellman, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.4.1. Zenodo, 2020 - [d9]Oscar Esteban, Christopher J. Markiewicz, Hans J. Johnson, Erik Ziegler, Alexandre Manhães-Savio, Dorota Jarecka, Christopher Burns, David Gage Ellis, Carlo Hämäläinen, Michael Philipp Notter, Benjamin Yvernault, Taylor Salo, Michael L. Waskom, Mathias Goncalves, Kesshi Jordan, Jason Wong, Blake E. Dewey, Cindee M. Madison, Erin Benderoff, Daniel Clark, Fred Loney, Dav Clark, Anisha Keshavan, Michael Joseph, Dylan Nielson, Michael Dayan, Marc Modat, Alexandre Gramfort, Salma Bougacha, Basile Pinsard, Shoshana Berleant, Horea Christian, Ariel Rokem, Matteo Visconti di Oleggio Castello, Yaroslav O. Halchenko, Jakub Kaczmarzyk, Gaël Varoquaux, Rastko Ciric, Brendan Moloney, Elizabeth Dupre, Serge Koudoro, Michael G. Clark, Ben Cipollini, Demian Wassermann, Jérémy Guillon, Ross D. Markello, Michael Hanke, Colin Buchanan, Rosalia Tungaraza, Ashley Gillman, Wolfgang M. Pauli, Gilles de Hollander, Sharad Sikka, Jessica Forbes, David Mordom, Shariq N. Iqbal, Matteo Mancini, Ian B. Malone, Mathieu Dubois, Yannick Schwartz, Caroline Frohlich, Alejandro Tabas, David Welch, Adam C. Richie-Halford, Steven Tilley, Aimi Watanabe, B. Nolan Nichols, Julia M. Huntenburg, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Katherine L. Bottenhorn, Chad Cumba, Benjamin T. Acland, Anibal Solon Heinsfeld, Erik K. Kastman, James D. Kent, Jens Kleesiek, Ali Ghayoor, Drew Erickson, Steven Giavasis, Alejandro de la Vega, Franz Liem, René Küttner, Martin Felipe Perez-Guevara, John A. Lee, Jarrod Millman, Jeff Lai, Dale Zhou, Christian Haselgrove, Daniel R. Glen, Anna Doll, Mandy Renfro, Carlos Correa, Siqi Liu, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Sin Kim, Ari E. Kahn, Tristan Glatard, William Triplett, Kshitij Chawla, John Salvatore, Fernando Pérez-García, Feilong Ma, Anne Park, R. Cameron Craddock, Oliver Hinds, Russell Poldrack, L. Nathan Perkins, Hrvoje Stojic, Andrey Chetverikov, Souheil Inati, Martin Grignard, Lukas Snoek, Lucinda M. Sisk, Katrin Leinweber, Junhao WEN, Sebastian Urchs, Ross Blair, K. Matsubara, Andrew Floren, Aaron Mattfeld, Stephan Gerhard, Jörg Stadler, Gavin Cooper, Daniel Haehn, William Broderick, Sami Andberg, Maxime Noel, Matt Cieslak, Joke Durnez, Eric Condamine, Dimitri Papadopoulos Orfanos, Daniel Geisler, Benjamin Meyers, Arielle Tambini, Alejandro Weinstein, Abel A. González Orozco, Robbert Harms, Ranjeet Khanuja, Paul Sharp, Olivia Stanley, Nat Lee, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Leon Weninger, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Claire Tarbert, Brian Cheung, Andrew N. Van, Andrew Davison, Dmitry Shachnev, Miguel Molina-Romero, Simon Rothmei, Murat Bilgel, Kai Schlamp, Eduard Ort, Daniel C. McNamee, Jaime Arias, Dmytro Bielievtsov, Christopher John Steele, Lijie Huang, Ivan Gonzalez, Joshua D. Warner, Daniel S. Margulies, Oliver Contier, Ana Marina, Victor Saase, Thomas Nickson, Jan Varada, Isaac Schwabacher, John Pellman, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.4.2. Zenodo, 2020 - [i6]Rupert W. Nash, Nick Brown, Michael R. Crusoe, Max Kontak:
Supercomputing with MPI meets the Common Workflow Language standards: an experience report. CoRR abs/2010.00422 (2020) - [i5]Alain Monteil, Alejandra N. González-Beltrán, Alexandros Ioannidis, Alice Allen, Allen Lee, Anita E. Bandrowski, Bruce E. Wilson, Bryce D. Mecum, Caifan Du, Carly Robinson, Daniel Garijo, Daniel S. Katz, David Long, Genevieve Milliken, Hervé Ménager, Jessica Hausman, Jurriaan H. Spaaks, Katrina Fenlon, Kristin Vanderbilt, Lorraine J. Hwang, Lynn Davis, Martin Fenner, Michael R. Crusoe, Michael Hucka, Mingfang Wu, Neil P. Chue Hong, Peter J. Teuben, Shelley Stall, Stephan Druskat, Ted Carnevale, Thomas Morrell:
Nine Best Practices for Research Software Registries and Repositories: A Concise Guide. CoRR abs/2012.13117 (2020)
2010 – 2019
- 2019
- [d8]Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Hans J. Johnson, Erik Ziegler, Alexandre Manhães-Savio, Dorota Jarecka, David Gage Ellis, Benjamin Yvernault, Carlo Hämäläinen, Michael Philipp Notter, Taylor Salo, Michael L. Waskom, Mathias Goncalves, Kesshi Jordan, Jason Wong, Blake E. Dewey, Cindee M. Madison, Daniel Clark, Fred Loney, Dav Clark, Dylan Nielson, Anisha Keshavan, Michael Joseph, Michael Dayan, Marc Modat, Salma Bougacha, Alexandre Gramfort, Matteo Visconti di Oleggio Castello, Basile Pinsard, Shoshana Berleant, Horea Christian, Ariel Rokem, Yaroslav O. Halchenko, Jakub Kaczmarzyk, Erin Benderoff, Rastko Ciric, Gaël Varoquaux, Brendan Moloney, Elizabeth Dupre, Serge Koudoro, Michael G. Clark, Demian Wassermann, Ben Cipollini, Jérémy Guillon, Ross D. Markello, Colin Buchanan, Michael Hanke, Rosalia Tungaraza, Sharad Sikka, Ashley Gillman, Wolfgang M. Pauli, Gilles de Hollander, Jessica Forbes, Shariq N. Iqbal, David Mordom, Matteo Mancini, Ian B. Malone, Mathieu Dubois, Yannick Schwartz, Caroline Frohlich, Alejandro Tabas, David Welch, Adam C. Richie-Halford, Steven Tilley, Aimi Watanabe, B. Nolan Nichols, Julia M. Huntenburg, Arman Eshaghi, Alexander Schäfer, Daniel Ginsburg, Katherine L. Bottenhorn, Chad Cumba, Benjamin T. Acland, Anibal Solon Heinsfeld, Erik K. Kastman, James D. Kent, Jens Kleesiek, Drew Erickson, Steven Giavasis, Ali Ghayoor, Franz Liem, Alejandro de la Vega, René Küttner, Jarrod Millman, Martin Felipe Perez-Guevara, John A. Lee, Dale Zhou, Christian Haselgrove, Daniel R. Glen, Mandy Renfro, Carlos Correa, Siqi Liu, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Ari E. Kahn, Tristan Glatard, William Triplett, Kshitij Chawla, John Salvatore, Fernando Pérez-García, Feilong Ma, Anne Park, R. Cameron Craddock, Oliver Hinds, Russell Poldrack, L. Nathan Perkins, Sin Kim, Andrey Chetverikov, Souheil Inati, Matt Cieslak, Martin Grignard, Lukas Snoek, Lucinda M. Sisk, Katrin Leinweber, Junhao WEN, K. Matsubara, Sebastian Urchs, Ross Blair, Andrew Floren, Aaron Mattfeld, Stephan Gerhard, Gavin Cooper, Daniel Haehn, Arielle Tambini, William Broderick, Sami Andberg, Maxime Noel, Joke Durnez, Jörg Stadler, Eric Condamine, Dimitri Papadopoulos Orfanos, Daniel Geisler, Alejandro Weinstein, Robbert Harms, Ranjeet Khanuja, Paul Sharp, Olivia Stanley, Nat Lee, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Dmitry Shachnev, Claire Tarbert, Brian Cheung, Benjamin Meyers, Andrew N. Van, Andrew Davison, Leon Weninger, Miguel Molina-Romero, Simon Rothmei, Murat Bilgel, Kai Schlamp, Eduard Ort, Daniel C. McNamee, Jeff Lai, Jaime Arias, Dmytro Bielievtsov, Christopher John Steele, Lijie Huang, Ivan Gonzalez, Joshua D. Warner, Daniel S. Margulies, Oliver Contier, Ana Marina, Victor Saase, Thomas Nickson, Jan Varada, Isaac Schwabacher, John Pellman, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.4.0. Zenodo, 2019 - [d7]Oscar Esteban, Christopher J. Markiewicz, Dorota Jarecka, Erik Ziegler, Hans J. Johnson, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Michael Philipp Notter, Benjamin Yvernault, David Gage Ellis, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Erin Benderoff, Daniel Clark, Fred Loney, Blake E. Dewey, Dylan Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Marc Modat, Michael Dayan, Dav Clark, Anisha Keshavan, Matteo Visconti di Oleggio Castello, Basile Pinsard, Alexandre Gramfort, Yaroslav O. Halchenko, Horea Christian, Shoshana Berleant, Michael Joseph, Jérémy Guillon, Ariel Rokem, Serge Koudoro, Ross D. Markello, Elizabeth Dupre, Jakub Kaczmarzyk, Brendan Moloney, Ben Cipollini, Gaël Varoquaux, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Jessica Forbes, Matteo Mancini, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Alejandro de la Vega, Arman Eshaghi, Anibal Solon Heinsfeld, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Benjamin T. Acland, Franz Liem, James D. Kent, Jens Kleesiek, John A. Lee, Drew Erickson, Steven Giavasis, Carlos Correa, Ali Ghayoor, René Küttner, Martin Felipe Perez-Guevara, Jarrod Millman, Jeff Lai, Dale Zhou, Ross Blair, Christian Haselgrove, Steven Tilley, Mandy Renfro, Siqi Liu, Ari E. Kahn, Lucinda M. Sisk, Sin Kim, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Andrey Chetverikov, Martin Grignard, Feilong Ma, Matt Cieslak, Kshitij Chawla, John Salvatore, Anne Park, Tristan Glatard, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Murat Bilgel, Katrin Leinweber, Souheil Inati, L. Nathan Perkins, Lukas Snoek, Leon Weninger, Gavin Cooper, Aaron Mattfeld, K. Matsubara, Maxime Noel, Junhao WEN, Jörg Stadler, Brian Cheung, Sebastian Urchs, Olivia Stanley, Joke Durnez, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, Arielle Tambini, William Broderick, Simon Rothmei, Sami Andberg, Ranjeet Khanuja, Kai Schlamp, Jaime Arias, Dimitri Papadopoulos Orfanos, Claire Tarbert, Robbert Harms, Paul Sharp, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Benjamin Meyers, Andrew N. Van, Andrew Davison, Dmytro Bielievtsov, Christopher John Steele, Lijie Huang, Ivan Gonzalez, Joshua D. Warner, Daniel S. Margulies, Oliver Contier, Ana Marina, Victor Saase, Thomas Nickson, Jan Varada, Isaac Schwabacher, John Pellman, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.3.0-rc1. Zenodo, 2019 - [d6]Oscar Esteban, Christopher J. Markiewicz, Dorota Jarecka, Erik Ziegler, Hans J. Johnson, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Michael Philipp Notter, Benjamin Yvernault, David Gage Ellis, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Daniel Clark, Fred Loney, Blake E. Dewey, Dylan Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Marc Modat, Michael Dayan, Dav Clark, Anisha Keshavan, Matteo Visconti di Oleggio Castello, Basile Pinsard, Alexandre Gramfort, Erin Benderoff, Yaroslav O. Halchenko, Horea Christian, Shoshana Berleant, Michael Joseph, Jérémy Guillon, Ariel Rokem, Serge Koudoro, Ross D. Markello, Elizabeth Dupre, Jakub Kaczmarzyk, Brendan Moloney, Ben Cipollini, Gaël Varoquaux, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Jessica Forbes, Matteo Mancini, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Steven Tilley, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Alejandro de la Vega, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Anibal Solon Heinsfeld, Benjamin T. Acland, Franz Liem, James D. Kent, Jens Kleesiek, John A. Lee, Drew Erickson, Steven Giavasis, Carlos Correa, Ali Ghayoor, René Küttner, Martin Felipe Perez-Guevara, Jarrod Millman, Dale Zhou, Ross Blair, Christian Haselgrove, Mandy Renfro, Siqi Liu, Ari E. Kahn, Sin Kim, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Lucinda M. Sisk, Andrey Chetverikov, Martin Grignard, Feilong Ma, Matt Cieslak, Kshitij Chawla, John Salvatore, Anne Park, Tristan Glatard, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Katrin Leinweber, Souheil Inati, L. Nathan Perkins, Gavin Cooper, Aaron Mattfeld, K. Matsubara, Maxime Noel, Lukas Snoek, Leon Weninger, Junhao WEN, Brian Cheung, Sebastian Urchs, Olivia Stanley, Joke Durnez, Jörg Stadler, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, Arielle Tambini, William Broderick, Simon Rothmei, Sami Andberg, Ranjeet Khanuja, Murat Bilgel, Kai Schlamp, Dimitri Papadopoulos Orfanos, Claire Tarbert, Robbert Harms, Paul Sharp, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Benjamin Meyers, Andrew N. Van, Andrew Davison, Jeff Lai, Jaime Arias, Dmytro Bielievtsov, Christopher John Steele, Lijie Huang, Ivan Gonzalez, Joshua D. Warner, Daniel S. Margulies, Oliver Contier, Ana Marina, Victor Saase, Thomas Nickson, Jan Varada, Isaac Schwabacher, John Pellman, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.3.0. Zenodo, 2019 - [d5]Oscar Esteban, Christopher J. Markiewicz, Erik Ziegler, David Gage Ellis, Dorota Jarecka, Hans J. Johnson, Michael Philipp Notter, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Benjamin Yvernault, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Marc Modat, Daniel Clark, Fred Loney, Blake E. Dewey, Dylan Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Michael Dayan, Dav Clark, Anisha Keshavan, Matteo Visconti di Oleggio Castello, Basile Pinsard, Alexandre Gramfort, Shoshana Berleant, Erin Benderoff, Yaroslav O. Halchenko, Horea Christian, Michael Joseph, Ben Cipollini, Jérémy Guillon, Ariel Rokem, Serge Koudoro, Elizabeth Dupre, Ross D. Markello, Jakub Kaczmarzyk, Brendan Moloney, Gaël Varoquaux, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Jessica Forbes, Matteo Mancini, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, James D. Kent, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Alejandro de la Vega, Arman Eshaghi, Anibal Solon Heinsfeld, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Benjamin T. Acland, Franz Liem, Jens Kleesiek, John A. Lee, Drew Erickson, Steven Giavasis, Carlos Correa, Ali Ghayoor, Oliver Contier, René Küttner, Martin Perez-Guevara, Jarrod Millman, Dale Zhou, Ross Blair, Christian Haselgrove, Steven Tilley, Mandy Renfro, Siqi Liu, Ari E. Kahn, Jörg Stadler, Sin Kim, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Lucinda M. Sisk, Katrin Leinweber, Andrey Chetverikov, Martin Grignard, Feilong Ma, Matt Cieslak, Kshitij Chawla, John Salvatore, Anne Park, Tristan Glatard, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Gavin Cooper, Souheil Inati, L. Nathan Perkins, Ana Marina, Aaron Mattfeld, Maxime Noel, Lukas Snoek, Leon Weninger, K. Matsubara, Junhao WEN, Brian Cheung, Sebastian Urchs, Joke Durnez, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Paul Sharp, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, William Broderick, Victor Saase, Simon Rothmei, Sami Andberg, Robbert Harms, Ranjeet Khanuja, Murat Bilgel, Kai Schlamp, Jaime Arias, Dimitri Papadopoulos Orfanos, Claire Tarbert, Arielle Tambini, Thomas Nickson, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Benjamin Meyers, Andrew N. Van, Andrew Davison, Jan Varada, Isaac Schwabacher, John Pellman, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Jeff Lai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.2.3. Zenodo, 2019 - [d4]Krzysztof J. Gorgolewski, Oscar Esteban, Christopher J. Markiewicz, Erik Ziegler, David Gage Ellis, Dorota Jarecka, Hans J. Johnson, Michael Philipp Notter, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Benjamin Yvernault, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Erin Benderoff, Marc Modat, Daniel Clark, Fred Loney, Blake E. Dewey, Dylan Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Michael Dayan, Dav Clark, Anisha Keshavan, Matteo Visconti di Oleggio Castello, Basile Pinsard, Alexandre Gramfort, Shoshana Berleant, Horea Christian, Yaroslav O. Halchenko, Ben Cipollini, Jérémy Guillon, Ariel Rokem, Serge Koudoro, Elizabeth Dupre, Ross D. Markello, Jakub Kaczmarzyk, Brendan Moloney, Gaël Varoquaux, Michael Joseph, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Matteo Mancini, Jessica Forbes, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, Anibal Solon Heinsfeld, James D. Kent, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Alejandro de la Vega, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Benjamin T. Acland, Franz Liem, Jens Kleesiek, Drew Erickson, Steven Giavasis, John A. Lee, Carlos Correa, Ali Ghayoor, Oliver Contier, René Küttner, Jarrod Millman, Jeff Lai, Dale Zhou, Ross Blair, Christian Haselgrove, Mandy Renfro, Siqi Liu, Jörg Stadler, Ari E. Kahn, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Lucinda M. Sisk, Katrin Leinweber, Andrey Chetverikov, Martin Grignard, Feilong Ma, Matt Cieslak, Kshitij Chawla, John Salvatore, Anne Park, Tristan Glatard, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Gavin Cooper, Souheil Inati, L. Nathan Perkins, Lukas Snoek, Leon Weninger, Garikoitz Lerma-Usabiaga, Ana Marina, Aaron Mattfeld, K. Matsubara, Maxime Noel, Brian Cheung, Sebastian Urchs, Joke Durnez, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Paul Sharp, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, Arielle Tambini, William Broderick, Victor Saase, Simon Rothmei, Sami Andberg, Robbert Harms, Ranjeet Khanuja, Kai Schlamp, Jaime Arias, Dimitri Papadopoulos Orfanos, Claire Tarbert, Thomas Nickson, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Benjamin Meyers, Andrew N. Van, Andrew Davison, Jan Varada, Isaac Schwabacher, John Pellman, Martin Perez-Guevara, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Satrajit S. Ghosh:
nipy/nipype: 1.2.1. Zenodo, 2019 - [d3]Krzysztof J. Gorgolewski, Oscar Esteban, Christopher J. Markiewicz, Erik Ziegler, David Gage Ellis, Dorota Jarecka, Hans J. Johnson, Michael Philipp Notter, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Benjamin Yvernault, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Marc Modat, Daniel Clark, Fred Loney, Blake E. Dewey, Dylan Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Michael Dayan, Dav Clark, Anisha Keshavan, Matteo Visconti di Oleggio Castello, Basile Pinsard, Alexandre Gramfort, Shoshana Berleant, Erin Benderoff, Horea Christian, Yaroslav O. Halchenko, Ben Cipollini, Jérémy Guillon, Ariel Rokem, Serge Koudoro, Elizabeth Dupre, Ross D. Markello, Jakub Kaczmarzyk, Brendan Moloney, Gaël Varoquaux, Michael Joseph, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Matteo Mancini, Jessica Forbes, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, Anibal Solon Heinsfeld, James D. Kent, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Alejandro de la Vega, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Benjamin T. Acland, Franz Liem, Jens Kleesiek, Drew Erickson, John A. Lee, Steven Giavasis, Carlos Correa, Ali Ghayoor, Oliver Contier, René Küttner, Jarrod Millman, Dale Zhou, Ross Blair, Christian Haselgrove, Steven Tilley, Mandy Renfro, Siqi Liu, Ari E. Kahn, Jörg Stadler, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Lucinda M. Sisk, Katrin Leinweber, Andrey Chetverikov, Martin Grignard, Feilong Ma, Matt Cieslak, Kshitij Chawla, John Salvatore, Anne Park, Tristan Glatard, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Gavin Cooper, Souheil Inati, L. Nathan Perkins, Ana Marina, Aaron Mattfeld, Maxime Noel, Lukas Snoek, Leon Weninger, K. Matsubara, Brian Cheung, Sebastian Urchs, Joke Durnez, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Paul Sharp, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, William Broderick, Victor Saase, Simon Rothmei, Sami Andberg, Robbert Harms, Ranjeet Khanuja, Murat Bilgel, Kai Schlamp, Jaime Arias, Dimitri Papadopoulos Orfanos, Claire Tarbert, Arielle Tambini, Thomas Nickson, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Benjamin Meyers, Andrew N. Van, Andrew Davison, Jan Varada, Isaac Schwabacher, John Pellman, Martin Perez-Guevara, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Jeff Lai, Satrajit S. Ghosh:
nipy/nipype: 1.2.2. Zenodo, 2019 - [d2]Krzysztof J. Gorgolewski, Oscar Esteban, Christopher J. Markiewicz, Erik Ziegler, David Gage Ellis, Dorota Jarecka, Hans J. Johnson, Michael Philipp Notter, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Benjamin Yvernault, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Marc Modat, Daniel Clark, Fred Loney, Blake E. Dewey, Dylan Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Michael Dayan, Dav Clark, Anisha Keshavan, Matteo Visconti di Oleggio Castello, Basile Pinsard, Alexandre Gramfort, Shoshana Berleant, Erin Benderoff, Horea Christian, Yaroslav O. Halchenko, Ben Cipollini, Jérémy Guillon, Ariel Rokem, Serge Koudoro, Elizabeth Dupre, Ross D. Markello, Jakub Kaczmarzyk, Brendan Moloney, Gaël Varoquaux, Michael Joseph, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Matteo Mancini, Jessica Forbes, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, James D. Kent, Anibal Solon Heinsfeld, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Alejandro de la Vega, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Benjamin T. Acland, Franz Liem, Jens Kleesiek, Drew Erickson, John A. Lee, Steven Giavasis, Carlos Correa, Ali Ghayoor, Oliver Contier, René Küttner, Jarrod Millman, Dale Zhou, Ross Blair, Christian Haselgrove, Steven Tilley, Mandy Renfro, Siqi Liu, Ari E. Kahn, Jörg Stadler, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Lucinda M. Sisk, Katrin Leinweber, Andrey Chetverikov, Martin Grignard, Feilong Ma, Matt Cieslak, Kshitij Chawla, John Salvatore, Anne Park, Tristan Glatard, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Gavin Cooper, Souheil Inati, L. Nathan Perkins, Ana Marina, Aaron Mattfeld, Maxime Noel, Lukas Snoek, Leon Weninger, K. Matsubara, Brian Cheung, Sebastian Urchs, Joke Durnez, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Paul Sharp, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, William Broderick, Victor Saase, Simon Rothmei, Sami Andberg, Robbert Harms, Ranjeet Khanuja, Murat Bilgel, Kai Schlamp, Jaime Arias, Dimitri Papadopoulos Orfanos, Claire Tarbert, Arielle Tambini, Thomas Nickson, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Garikoitz Lerma-Usabiaga, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Benjamin Meyers, Andrew N. Van, Andrew Davison, Jan Varada, Isaac Schwabacher, John Pellman, Martin Perez-Guevara, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Jeff Lai, Satrajit S. Ghosh:
nipy/nipype: 1.2.2. Zenodo, 2019 - [d1]Krzysztof J. Gorgolewski, Oscar Esteban, Christopher J. Markiewicz, Erik Ziegler, David Gage Ellis, Dorota Jarecka, Michael Philipp Notter, Hans J. Johnson, Christopher Burns, Alexandre Manhães-Savio, Carlo Hämäläinen, Benjamin Yvernault, Taylor Salo, Mathias Goncalves, Kesshi Jordan, Michael L. Waskom, Jason Wong, Marc Modat, Fred Loney, Daniel Clark, Blake E. Dewey, Dylan M. Nielson, Cindee M. Madison, Salma Bougacha, Rastko Ciric, Michael G. Clark, Michael Dayan, Dav Clark, Matteo Visconti di Oleggio Castello, Anisha Keshavan, Basile Pinsard, Alexandre Gramfort, Shoshana Berleant, Horea Christian, Yaroslav O. Halchenko, Ben Cipollini, Jérémy Guillon, Ross D. Markello, Ariel Rokem, Serge Koudoro, Elizabeth Dupre, Jakub Kaczmarzyk, Brendan Moloney, Gaël Varoquaux, Michael Joseph, Demian Wassermann, Michael Hanke, Gilles de Hollander, David Mordom, Ashley Gillman, Colin R. Buchanan, Alejandro Tabas, Rosalia Tungaraza, Wolfgang M. Pauli, Sharad Sikka, Matteo Mancini, Jessica Forbes, Shariq N. Iqbal, Yannick Schwartz, Adam C. Richie-Halford, Ian B. Malone, Mathieu Dubois, Anibal Solon Heinsfeld, Caroline Frohlich, David Welch, Katherine L. Bottenhorn, James D. Kent, Alejandro de la Vega, Aimi Watanabe, Julia M. Huntenburg, Chad Cumba, B. Nolan Nichols, Arman Eshaghi, Daniel Ginsburg, Alexander Schäfer, Erik K. Kastman, Benjamin T. Acland, Franz Liem, Jens Kleesiek, Drew Erickson, Steven Giavasis, Carlos Correa, Ali Ghayoor, Oliver Contier, René Küttner, Jarrod Millman, Jeff Lai, Dale Zhou, Ross Blair, Christian Haselgrove, Tristan Glatard, Mandy Renfro, Siqi Liu, Jörg Stadler, Ari E. Kahn, Fernando Pérez-García, William Triplett, Leonie Lampe, Xiang-Zhen Kong, Michael Hallquist, Katrin Leinweber, Andrey Chetverikov, Martin Grignard, Feilong Ma, Kshitij Chawla, John Salvatore, Anne Park, Russell Poldrack, R. Cameron Craddock, Oliver Hinds, Gavin Cooper, Leon Weninger, Souheil Inati, L. Nathan Perkins, Lukas Snoek, Ana Marina, Aaron Mattfeld, K. Matsubara, Maxime Noel, Brian Cheung, Sebastian Urchs, Joke Durnez, Eric Condamine, Daniel Geisler, Andrew Floren, Stephan Gerhard, Paul Sharp, Miguel Molina-Romero, Daniel Haehn, Alejandro Weinstein, Arielle Tambini, William Broderick, Victor Saase, Simon Rothmei, Sami Kristian Andberg, Robbert Harms, Ranjeet Khanuja, Kai Schlamp, Jaime Arias, Dimitri Papadopoulos Orfanos, Claire Tarbert, Thomas Nickson, Michael R. Crusoe, Matthew Brett, Marcel Falkiewicz, Kornelius Podranski, Janosch Linkersdörfer, Guillaume Flandin, Eduard Ort, Dmitry Shachnev, Daniel C. McNamee, Andrew Davison, Jan Varada, Isaac Schwabacher, John Pellman, Martin Perez-Guevara, Nicolas Pannetier, Conor McDermottroe, Paul Glad Mihai, Satrajit S. Ghosh:
nipy/nipype: 1.2.0. Zenodo, 2019 - 2018
- [j3]Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O'Connor, Michael R. Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila S. Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola J. Mulder:
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics. BMC Bioinform. 19(1): 457:1-457:13 (2018) - [c2]Tibor Simko, Kyle Cranmer, Michael R. Crusoe, Lukas Heinrich, Anton Khodak, Dinos Kousidis, Diego Rodriguez:
Search for Computational Workflow Synergies in Reproducible Research Data Analyses in Particle Physics and Life Sciences. eScience 2018: 403-404 - [i4]Stian Soiland-Reyes, Farah Zaib Khan, Richard O. Sinnott, Andrew Lonie, Michael R. Crusoe, Carole A. Goble:
Capturing interoperable reproducible workflows with Common Workflow Language. RO 2018 - [i3]Björn A. Grüning, Olivier Sallou, Pablo A. Moreno, Felipe da Veiga Leprevost, Hervé Ménager, Dan Søndergaard, Hannes L. Röst, Timo Sachsenberg, Brian O'Connor, Fábio Madeira, Victoria Dominguez Del Angel, Michael R. Crusoe, Susheel Varma, Daniel J. Blankenberg, Rafael C. Jiménez, Daniel Blankenberg, Yasset Pérez-Riverol:
Recommendations for the packaging and containerizing of bioinformatics software. F1000Research 7: 742 (2018) - 2017
- [j2]Steffen Möller, Stuart W. Prescott, Lars Wirzenius, Petter Reinholdtsen, Brad Chapman, Pjotr Prins, Stian Soiland-Reyes, Fabian Klötzl, Andrea Bagnacani, Matús Kalas, Andreas Tille, Michael R. Crusoe:
Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis. Data Sci. Eng. 2(3): 232-244 (2017) - [j1]Daniel S. Standage, Ali yari, Lisa J. Cohen, Michael R. Crusoe, Tim Head, Luiz Irber, Shannon E. K. Joslin, N. B. Kingsley, Kevin D. Murray, Russell Y. Neches, Camille Scott, Ryan Shean, Sascha Steinbiss, Cait Sydney, C. Titus Brown:
khmer release v2.1: software for biological sequence analysis. J. Open Source Softw. 2(15): 272 (2017) - [i2]Kenzo-Hugo Hillion, Ivan Kuzmin, Anton Khodak, Eric Rasche, Michael R. Crusoe, Hedi Peterson, Jon C. Ison, Hervé Ménager:
Using bio.tools to generate and annotate workbench tool descriptions. F1000Research 6: 2074- (2017) - 2015
- [i1]Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan A. Fish, Leonor Garcia-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer A. Mansour, Pamela McA'Nulty, Eric McDonald, Jessica Mizzi, Kevin D. Murray, Joshua R. Nahum, Kaben Nanlohy, Alexander Johan Nederbragt, Humberto Ortiz-Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe-Ranney, Zachary N. Russ, Erich M. Schwarz, Camille Scott, Josiah D. Seaman, Scott Sievert, Jared Simpson, Connor Skennerton, James Spencer, Ramakrishnan Srinivasan, Daniel S. Standage, James A. Stapleton, Susan R. Steinman, Joe Stein, Benjamin Taylor, Will Trimble, Heather Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, en zyme, C. Titus Brown:
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Research 4: 900 (2015)
2000 – 2009
- 2005
- [c1]Michael R. Crusoe:
Using Your Body for Authentication: A Biometrics Guide for System Administrators. LISA 2005
Coauthor Index
aka: Sami Kristian Andberg
aka: Matteo Visconti di Oleggio Castello
aka: Elizabeth Dupre
aka: Carlo Hamalainen
aka: Cindee Madison
aka: Martin Felipe Perez-Guevara
aka: Russell Poldrack
aka: Alejandro Tabas
aka: Michael Waskom
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