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2020 – today
- 2024
- [j64]Chao Shi
, Xiaoqing Zuo, Jianming Zhang, Daming Zhu, Yongfa Li, Jinwei Bu
:
Accuracy Assessment of Geometric-Distortion Identification Methods for Sentinel-1 Synthetic Aperture Radar Imagery in Highland Mountainous Regions. Sensors 24(9): 2834 (2024) - [j63]Tiantian Li
, Haitao Jiang
, Binhai Zhu
, Lusheng Wang
, Daming Zhu
:
Flanked Block-Interchange Distance on Strings. IEEE ACM Trans. Comput. Biol. Bioinform. 21(2): 301-311 (2024) - [j62]Aizhong Zhou, Haodi Feng, Jiong Guo, Haitao Jiang, Nan Liu, Binhai Zhu, Daming Zhu:
New approximation algorithms for RNA secondary structures prediction problems by local search. Theor. Comput. Sci. 988: 114354 (2024) - [c70]Yu Zhang, Yang Zhou, Haodi Feng, Daming Zhu:
FOKHic: A Framework of ${\varvec{k}}$-mer Based Hierarchical Classification. ICIC (LNAI 6) 2024: 86-96 - 2023
- [j61]Cheng Chen
, Yuguo Zha, Daming Zhu
, Kang Ning
, Xuefeng Cui
:
ContactLib-ATT: A Structure-Based Search Engine for Homologous Proteins. IEEE ACM Trans. Comput. Biol. Bioinform. 20(6): 3421-3429 (2023) - [c69]Chengcheng Sun, Haitao Jiang, Daming Zhu:
Improved Approximation Algorithms for Sorting Unsigned Genomes by Reversals. BIBM 2023: 36-42 - [c68]Yuyang Wang, Haitao Jiang, Haodi Feng, Daming Zhu:
Minimize Maximum Coverage of Fragment Alignment Selection. BIBM 2023: 349-354 - [c67]Yanmin Liu, Xuan Zhang, Wei Zhao, Daming Zhu, Xuefeng Cui:
De Novo Molecular Structure Generation from Mass Spectra. BIBM 2023: 373-378 - [c66]Shu Zhang, Qichen Wang, Daming Zhu, Haitao Jiang:
Longest Order Conserved Repetition-free Subsequences. BIBM 2023: 3438-3445 - [c65]Xin Tong, Yixiao Yu, Ziyi Fang, Haitao Jiang, Lusheng Wang
, Binhai Zhu
, Daming Zhu:
Cabbage Can't Always Be Transformed into Turnip: Decision Algorithms for Sorting by Symmetric Reversals. COCOON (2) 2023: 279-294 - [c64]Huixiu Xu, Xin Tong, Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu:
On Sorting by Flanked Transpositions. ISBRA 2023: 292-311 - [i5]Xin Tong, Yixiao Yu, Ziyi Fang, Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu:
Men Can't Always be Transformed into Mice: Decision Algorithms and Complexity for Sorting by Symmetric Reversals. CoRR abs/2302.03797 (2023) - 2022
- [j60]Runmin Yang, Jingjing Ma, Shu Zhang, Yu Zheng, Lusheng Wang
, Daming Zhu
:
mzMD: visualization-oriented MS data storage and retrieval. Bioinform. 38(8): 2333-2340 (2022) - [j59]Yongfa Li
, Xiaoqing Zuo, Daming Zhu, Wenhao Wu, Xu Yang, Shipeng Guo, Chao Shi, Cheng Huang, Fang Li, Xinyu Liu:
Identification and Analysis of Landslides in the Ahai Reservoir Area of the Jinsha River Basin Using a Combination of DS-InSAR, Optical Images, and Field Surveys. Remote. Sens. 14(24): 6274 (2022) - [j58]Jin Zhao
, Haodi Feng
, Daming Zhu
, Yu Lin:
MultiTrans: An Algorithm for Path Extraction Through Mixed Integer Linear Programming for Transcriptome Assembly. IEEE ACM Trans. Comput. Biol. Bioinform. 19(1): 48-56 (2022) - [j57]Jingjing Ma
, Haitao Jiang, Daming Zhu
, Runmin Yang:
Algorithms and Hardness for Scaffold Filling to Maximize Increased Duo-Preservations. IEEE ACM Trans. Comput. Biol. Bioinform. 19(4): 2071-2079 (2022) - [j56]Shengjun Xie, Haodi Feng, Haitao Jiang, Daming Zhu:
Approximation algorithms for sorting by bounded singleton moves. Theor. Comput. Sci. 917: 51-65 (2022) - [c63]Jinsheng Shang, Qihong Jiao, Cheng Chen, Daming Zhu, Xuefeng Cui:
Pretraining Transformers for TCR-pMHC Binding Prediction. BIBM 2022: 26-31 - [c62]Tiantian Li, Daming Zhu, Haitao Jiang, Haodi Feng, Xuefeng Cui:
Longest k-tuple Common Sub-Strings. BIBM 2022: 63-66 - [c61]Yu Zhang, Chenchen Li, Haodi Feng, Daming Zhu:
DLmeta: a deep learning method for metagenomic identification. BIBM 2022: 303-308 - [c60]Zhendong Liu, Dongyan Li, Xi Chen, Xinrong Lv, Daming Zhu, Xiaofeng Li:
Predicting Algorithm of Transcription Factor Binding Sites Based on Weighted Multi-Grained Scanning. BIBM 2022: 3085-3092 - [c59]Zhendong Liu, Xi Chen, Dongyan Li, Xinrong Lv, Daming Zhu, Xiaofeng Li:
Prediction Algorithm of DNA Sites Based on Weighted Feature Matrix. BIBM 2022: 3093-3100 - 2021
- [j55]Shu Zhang, Daming Zhu
, Haitao Jiang, Jiong Guo, Haodi Feng, Xiaowen Liu:
Sorting a Permutation by Best Short Swaps. Algorithmica 83(7): 1953-1979 (2021) - [j54]Wenyan Gu, Aizhong Zhou
, Lusheng Wang, Shiwei Sun, Xuefeng Cui, Daming Zhu:
SVLR: Genome Structural Variant Detection Using Long-Read Sequencing Data. J. Comput. Biol. 28(8): 774-788 (2021) - [j53]Xingfu Li, Daming Zhu, Lusheng Wang:
A 43-approximation algorithm for the Maximum Internal Spanning Tree Problem. J. Comput. Syst. Sci. 118: 131-140 (2021) - [j52]Anhong Tian
, Junsan Zhao, Bo-Hui Tang
, Daming Zhu, Chengbiao Fu, Heigang Xiong:
Study on the Pretreatment of Soil Hyperspectral and Na+ Ion Data under Different Degrees of Human Activity Stress by Fractional-Order Derivatives. Remote. Sens. 13(19): 3974 (2021) - [j51]Anhong Tian
, Junsan Zhao, Bo-Hui Tang
, Daming Zhu, Chengbiao Fu, Heigang Xiong:
Hyperspectral Prediction of Soil Total Salt Content by Different Disturbance Degree under a Fractional-Order Differential Model with Differing Spectral Transformations. Remote. Sens. 13(21): 4283 (2021) - [j50]Chengbiao Fu
, Anhong Tian
, Daming Zhu, Junsan Zhao, Heigang Xiong:
Estimation of Salinity Content in Different Saline-Alkali Zones Based on Machine Learning Model Using FOD Pretreatment Method. Remote. Sens. 13(24): 5140 (2021) - [j49]Jingjing Ma, Daming Zhu, Haitao Jiang, Binhai Zhu:
On the solution bound of two-sided scaffold filling. Theor. Comput. Sci. 873: 47-63 (2021) - [j48]Peiyan Zhou, Haitao Jiang, Daming Zhu, Binhai Zhu:
Approximation algorithms for the maximum vertex coverage problem on bounded degree graphs. Theor. Comput. Sci. 888: 22-30 (2021) - [c58]Cheng Chen, Yuguo Zha
, Daming Zhu, Kang Ning
, Xuefeng Cui:
Hydrogen bonds meet self-attention: all you need for protein structure embedding. BIBM 2021: 12-17 - [c57]Chenchen Li, Jin Zhao, Haodi Feng, Daming Zhu:
TransCoord: Genome-guided Transcripts Assembly by Coordinating Candidate Paths into Two-phased Linear Programming. BIBM 2021: 296-301 - [c56]Zongzhao Qiu, Qihong Jiao, Yuxiao Wang, Cheng Chen, Daming Zhu, Xuefeng Cui:
rzMLP-DTA: gMLP network with ReZero for sequence-based drug-target affinity prediction. BIBM 2021: 308-313 - [c55]Runmin Yang, Jingjing Ma, Shu Zhang, Yu Zheng, Lusheng Wang, Daming Zhu:
mzMD: A New Storage and Retrieval System for Mass Spectrometry Data. ICIC (3) 2021: 77-86 - 2020
- [j47]Lixin Liu, Haitao Jiang, Peiqiang Liu, Binhai Zhu, Daming Zhu:
Maximum Stacking Base Pairs: Hardness and Approximation by Nonlinear Linear Programming-Rounding. J. Comput. Biol. 27(2): 200-211 (2020) - [j46]Lianrong Pu, Daming Zhu, Haitao Jiang:
A 1.375-approximation algorithm for unsigned translocation sorting. J. Comput. Syst. Sci. 113: 163-178 (2020) - [j45]Hai Yang, Daming Zhu:
Improved detection algorithm for copy number variations based on hidden Markov model. Multim. Tools Appl. 79(13-14): 9237-9253 (2020) - [j44]Jin Zhao
, Haodi Feng, Daming Zhu
, Chi Zhang, Ying Xu:
IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 938-948 (2020) - [j43]Huiqiang Jia, Haichao Wei, Daming Zhu
, Jingjing Ma, Hai Yang, Ruizhi Wang, Xianzhong Feng
:
PASA: Identifying More Credible Structural Variants of Hedou12. IEEE ACM Trans. Comput. Biol. Bioinform. 17(5): 1493-1503 (2020) - [j42]Jin Zhao
, Haodi Feng
, Daming Zhu
, Chi Zhang, Ying Xu:
Corrections to "IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads". IEEE ACM Trans. Comput. Biol. Bioinform. 17(6): 2197 (2020) - [c54]Wenyan Gu, Aizhong Zhou, Lusheng Wang, Shiwei Sun, Xuefeng Cui, Daming Zhu:
SVLR: Genome Structure Variant Detection Using Long Read Sequencing Data. ISBRA 2020: 140-153
2010 – 2019
- 2019
- [j41]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
DTA-SiST: de novo transcriptome assembly by using simplified suffix trees. BMC Bioinform. 20-S(25): 698 (2019) - [j40]Zhendong Liu, Daming Zhu, Qionghai Dai:
Improved predicting algorithm of RNA pseudoknotted structure. Int. J. Comput. Sci. Eng. 19(1): 64-70 (2019) - [j39]Hai Yang
, Daming Zhu:
Combinatorial Detection Algorithm for Copy Number Variations Using High-throughput Sequencing Reads. Int. J. Pattern Recognit. Artif. Intell. 33(14): 1950022:1-1950022:18 (2019) - [j38]Shanshan Zhai, Peng Zhang, Daming Zhu, Weitian Tong
, Yao Xu, Guohui Lin
:
An approximation algorithm for genome sorting by reversals to recover all adjacencies. J. Comb. Optim. 37(4): 1170-1190 (2019) - [c53]Shengjun Xie, Haodi Feng, Haitao Jiang, Junfeng Luan, Daming Zhu:
An Approximation Algorithm for Sorting by Bounded Singleton Moves. COCOON 2019: 580-590 - [c52]Haitao Jiang, Jiong Guo, Daming Zhu, Binhai Zhu:
A 2-Approximation Algorithm for the Complementary Maximal Strip Recovery Problem. CPM 2019: 5:1-5:13 - [c51]Lixin Liu, Haitao Jiang, Peiqiang Liu, Binhai Zhu, Daming Zhu:
Maximum Stacking Base Pairs: Hardness and Approximation by Nonlinear LP-Rounding. ISBRA 2019: 244-256 - 2018
- [j37]Zhendong Liu
, Daming Zhu, Qionghai Dai:
Predicting Model and Algorithm in RNA Folding Structure Including Pseudoknots. Int. J. Pattern Recognit. Artif. Intell. 32(10): 1851005:1-1851005:17 (2018) - [j36]Haitao Jiang, Letu Qingge, Daming Zhu, Binhai Zhu
:
A 2-approximation algorithm for the contig-based genomic scaffold filling problem. J. Bioinform. Comput. Biol. 16(6): 1850022:1-1850022:15 (2018) - [j35]Daming Zhu, Sergey Bereg:
Preface. Theor. Comput. Sci. 734: 1-2 (2018) - [j34]Lianrong Pu, Yu Lin
, Daming Zhu, Haitao Jiang:
Can a breakpoint graph be decomposed into none other than 2-cycles? Theor. Comput. Sci. 734: 38-45 (2018) - [c50]Shu Zhang, Ruizhi Wang, Daming Zhu, Haitao Jiang, Haodi Feng, Jiong Guo, Xiaowen Liu
:
The Longest Common Exemplar Subsequence Problem. BIBM 2018: 92-95 - [c49]Shu Zhang, Daming Zhu, Haitao Jiang, Jingjing Ma, Jiong Guo, Haodi Feng:
Can a permutation be sorted by best short swaps?. CPM 2018: 14:1-14:12 - [c48]Huiqiang Jia, Haichao Wei, Daming Zhu, Ruizhi Wang, Haodi Feng, Xiangzhong Feng
:
PASA: Identifying More Credible Structural Variants of Hedou12. ICIC (1) 2018: 553-558 - [c47]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
DTAST: A Novel Radical Framework for de Novo Transcriptome Assembly Based on Suffix Trees. ICIC (1) 2018: 740-745 - [c46]Hai Yang, Daming Zhu, Huiqiang Jia:
Improved Indel Detection Algorithm Based on Split-Read and Read-Depth. ICIC (3) 2018: 853-864 - [e2]Lusheng Wang, Daming Zhu:
Computing and Combinatorics - 24th International Conference, COCOON 2018, Qing Dao, China, July 2-4, 2018, Proceedings. Lecture Notes in Computer Science 10976, Springer 2018, ISBN 978-3-319-94775-4 [contents] - 2017
- [j33]Jie Cheng, Daming Zhu, Binhai Zhu:
Improved algorithms for intermediate dataset storage in a cloud-based dataflow. Theor. Comput. Sci. 657: 48-53 (2017) - [j32]Aiyong Xian, Kaiyuan Zhu, Daming Zhu, Lianrong Pu, Hong Liu:
Approximating Max NAE-k-SAT by anonymous local search. Theor. Comput. Sci. 657: 54-63 (2017) - [c45]Runmin Yang, Daming Zhu, Qiang Kou, Poornima Bhat-Nakshatri, Harikrishna Nakshatri
, Si Wu, Xiaowen Liu
:
A spectrum graph-based protein sequence filtering algorithm for proteoform identification by top-down mass spectrometry. BIBM 2017: 222-229 - [c44]Aizhong Zhou, Haitao Jiang, Jiong Guo, Daming Zhu:
A New Approximation Algorithm for the Maximum Stacking Base Pairs Problem from RNA Secondary Structures Prediction. COCOA (1) 2017: 85-92 - [c43]Jingjing Ma, Haitao Jiang, Daming Zhu, Shu Zhang:
A 1.4-Approximation Algorithm for Two-Sided Scaffold Filling. FAW 2017: 196-208 - [c42]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
IsoTree: De Novo Transcriptome Assembly from RNA-Seq Reads - (Extended Abstract). ISBRA 2017: 71-83 - 2016
- [j31]Nan Liu, Daming Zhu, Haitao Jiang, Binhai Zhu:
A 1.5-Approximation Algorithm for Two-Sided Scaffold Filling. Algorithmica 74(1): 91-116 (2016) - [c41]Huiqiang Jia, Haicho Wei, Daming Zhu, Jingjing Ma, Hai Yang, Ruizhi Wang, Xianzhong Feng
:
Mining structural variants of Heduo12 using paired-end reads. BIBM 2016: 111-115 - [c40]Haitao Jiang, Chenglin Fan, Boting Yang, Farong Zhong, Daming Zhu, Binhai Zhu:
Genomic Scaffold Filling Revisited. CPM 2016: 15:1-15:13 - [c39]Lianrong Pu, Daming Zhu, Haitao Jiang:
A New Approximation Algorithm for Unsigned Translocation Sorting. WABI 2016: 269-280 - [e1]Daming Zhu, Sergey Bereg:
Frontiers in Algorithmics, 10th International Workshop, FAW 2016, Qingdao, China, June 30- July 2, 2016, Proceedings. Lecture Notes in Computer Science 9711, Springer 2016, ISBN 978-3-319-39816-7 [contents] - 2015
- [j30]Haitao Jiang, Guohui Lin, Weitian Tong
, Daming Zhu, Binhai Zhu:
Isomorphism and similarity for 2-generation pedigrees. BMC Bioinform. 16(S-5): S7 (2015) - [j29]Zhexue Wei, Daming Zhu, Lusheng Wang
:
A Dynamic Programming Algorithm For (1, 2)-Exemplar Breakpoint Distance. J. Comput. Biol. 22(7): 666-676 (2015) - [j28]Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu:
A factor-(1.408 + ε) approximation for sorting unsigned genomes by reciprocal translocations. Theor. Comput. Sci. 607: 166-180 (2015) - [c38]Zhendong Liu, Daming Zhu, Qionghai Dai:
Predicting Algorithm of RNA Folding Structure with Pseudoknots. CIS 2015: 34-37 - [c37]Haitao Jiang, Jingjing Ma, Junfeng Luan, Daming Zhu:
Approximation and Nonapproximability for the One-Sided Scaffold Filling Problem. COCOON 2015: 251-263 - [c36]Jie Cheng, Daming Zhu, Binhai Zhu:
A New Algorithm for Intermediate Dataset Storage in a Cloud-Based Dataflow. FAW 2015: 33-44 - [c35]Aiyong Xian, Kaiyuan Zhu, Daming Zhu, Lianrong Pu:
Local Search to Approximate Max NAE- k k -Sat Tightly. FAW 2015: 271-281 - 2014
- [j27]Zhendong Liu, Daming Zhu, Hongwei Ma:
Predicting scheme of RNA folding structure including pseudoknots. Int. J. Sens. Networks 16(4): 229-235 (2014) - [c34]Zhexue Wei, Daming Zhu, Lusheng Wang
:
A parameterized algorithm for (1, 2)-exemplar breakpoint distance. BIBM 2014: 11-16 - [c33]Haitao Jiang, Lusheng Wang
, Binhai Zhu, Daming Zhu:
A (1.408+ε)-Approximation Algorithm for Sorting Unsigned Genomes by Reciprocal Translocations. FAW 2014: 128-140 - [c32]Xingfu Li, Daming Zhu:
Approximating the Maximum Internal Spanning Tree Problem via a Maximum Path-Cycle Cover. ISAAC 2014: 467-478 - [c31]Haitao Jiang, Haodi Feng, Daming Zhu:
An 5/4-Approximation Algorithm for Sorting Permutations by Short Block Moves. ISAAC 2014: 491-503 - [i4]Xingfu Li, Daming Zhu:
A 4/3-approximation algorithm for finding a spanning tree to maximize its internal vertices. CoRR abs/1409.3700 (2014) - 2013
- [j26]Peng Zhang, Wenbo Zhao, Daming Zhu:
Complexity and Approximation Results for the Min-Sum and Min-Max Disjoint Paths Problems. Comput. Informatics 32(1): 23-45 (2013) - [j25]Zhendong Liu, Daming Zhu:
New Heuristic Algorithm of RNA Structure Prediction Including Pseudoknots. J. Comput. 8(2): 279-283 (2013) - [j24]Nan Liu, Haitao Jiang, Daming Zhu, Binhai Zhu:
An Improved Approximation Algorithm for Scaffold Filling to Maximize the Common Adjacencies. IEEE ACM Trans. Comput. Biol. Bioinform. 10(4): 905-913 (2013) - [j23]Daming Zhu, Lusheng Wang
:
An Exact Algorithm for the Zero Exemplar Breakpoint Distance Problem. IEEE ACM Trans. Comput. Biol. Bioinform. 10(6): 1469-1477 (2013) - [j22]Xiao Yin, Daming Zhu:
Sorting genomes by generalized translocations. Theor. Comput. Sci. 491: 127-135 (2013) - [j21]Hong Liu, Daming Zhu:
Parameterized complexity of control by voter selection in Maximin, Copeland, Borda, Bucklin, and Approval election systems. Theor. Comput. Sci. 498: 115-123 (2013) - [c30]Hui Wang, Daming Zhu:
The Duplication-Loss Problem: Novel Algorithms Based on k-NNI Local Search. BIFE 2013: 1-5 - [c29]Zhexue Wei, Daming Zhu:
A Dynamic Programming Algorithm for Unsigned (1, 2)-Exemplar Breakpoint Distance Problem with Span Constraint. BIFE 2013: 39-43 - [c28]Zhendong Liu, Daming Zhu, Wei Cui, Nan Liu:
An Approximation Scheme for RNA Folding Structure Prediction Including Pseudoknots. CIS 2013: 6-10 - [c27]Nan Liu, Haitao Jiang, Daming Zhu, Binhai Zhu:
An Improved Approximation Algorithm for Scaffold Filling to Maximize the Common Adjacencies. COCOON 2013: 397-408 - [c26]Nan Liu, Daming Zhu:
The Algorithm for the Two-Sided Scaffold Filling Problem. TAMC 2013: 236-247 - [i3]Meixia Qu, Ke Chen, Daming Zhu, Junfeng Luan:
Implementing program extraction from CL1-proofs. CoRR abs/1311.6542 (2013) - 2012
- [j20]Fei Guo, Shuai Cheng Li
, Lusheng Wang
, Daming Zhu:
Protein-protein binding site identification by enumerating the configurations. BMC Bioinform. 13: 158 (2012) - [j19]Peng Zhang, Daming Zhu, Junfeng Luan:
An approximation algorithm for the Generalized k-Multicut problem. Discret. Appl. Math. 160(7-8): 1240-1247 (2012) - [j18]Haitao Jiang, Binhai Zhu, Daming Zhu, Hong Zhu:
Minimum common string partition revisited. J. Comb. Optim. 23(4): 519-527 (2012) - [j17]Xiaowen Lou, Daming Zhu:
A new approximation algorithm for cut-and-paste sorting of unsigned circular permutations. J. Comput. Syst. Sci. 78(4): 1099-1114 (2012) - [j16]Haitao Jiang, Daming Zhu, Binhai Zhu:
A (1+ε)-approximation algorithm for sorting by short block-moves. Theor. Comput. Sci. 439: 1-8 (2012) - [c25]Hong Liu, Peng Zhang, Daming Zhu:
On Editing Graphs into 2-Club Clusters. FAW-AAIM 2012: 235-246 - [c24]Zhexue Wei, Daming Zhu:
De Novo Peptide Sequencing Based on Vertex Contraction Algorithm. CSO 2012: 48-52 - [i2]Meixia Qu, Junfeng Luan, Daming Zhu:
On the toggling-branching recurrence of Computability Logic. CoRR abs/1207.1188 (2012) - 2011
- [j15]Haitao Jiang, Binhai Zhu, Daming Zhu:
Algorithms for sorting unsigned linear genomes by the DCJ operations. Bioinform. 27(3): 311-316 (2011) - [j14]Haitao Jiang, Daming Zhu:
A 14/11-approximation algorithm for sorting by short block-moves. Sci. China Inf. Sci. 54(2): 279-292 (2011) - [c23]Zhendong Liu, Zhijun Zhang, Zaixue Liu, Daming Zhu:
New Heuristic Algorithm of RNA Secondary Structure Prediction with Pseudoknots. CIS 2011: 110-114 - [c22]Daming Zhu, Shaohan Ma, Pingping Zhang:
Tight Bounds on Local Search to Approximate the Maximum Satisfiability Problems. COCOON 2011: 49-61 - [i1]Ming Li, Ali Miri, Daming Zhu:
Analysis of the Hamming Weight of the Extended wmbNAF. IACR Cryptol. ePrint Arch. 2011: 569 (2011) - 2010
- [j13]Hong Liu, Daming Zhu:
Parameterized complexity of control problems in Maximin election. Inf. Process. Lett. 110(10): 383-388 (2010) - [j12]Zhendong Liu, Hengwu Li, Daming Zhu:
A predicting algorithm of RNA secondary structure based on stems. Kybernetes 39(6): 1050-1057 (2010) - [c21]Haitao Jiang, Binhai Zhu, Daming Zhu, Hong Zhu:
Minimum Common String Partition Revisited. FAW 2010: 45-52
2000 – 2009
- 2009
- [j11]Hong Liu, Haodi Feng, Daming Zhu, Junfeng Luan:
Parameterized computational complexity of control problems in voting systems. Theor. Comput. Sci. 410(27-29): 2746-2753 (2009) - [c20]Fanchang Hao, Junfeng Luan, Daming Zhu:
Translocation-Deletions Distance Formula for Sorting Genomes. CSIE (4) 2009: 820-824 - [c19]Haitao Jiang, Daming Zhu:
A (1+e)-Approximation Algorithm for Sorting by Short Block-Moves. CSO (1) 2009: 580-583 - [c18]Peng Zhang, Daming Zhu, Junfeng Luan:
A Bicriteria Approximation Algorithm for Generalized k-Multicut in Trees. CSO (2) 2009: 699-702 - [c17]Hong Liu, Haodi Feng, Daming Zhu:
Parameterized Complexity of Finding Elementary Modes in Metabolic Networks. IJCBS 2009: 479-482 - [c16]Xiao Yin, Daming Zhu:
Polynomial-Time Algorithm for Sorting by Generalized Translocations. TAMC 2009: 440-449 - 2008
- [j10]Guohui Yao, Daming Zhu, Hengwu Li, Shaohan Ma:
A polynomial algorithm to compute the minimum degree spanning trees of directed acyclic graphs with applications to the broadcast problem. Discret. Math. 308(17): 3951-3959 (2008) - [j9]Aili Han, Daming Zhu, Jingchang Pan:
DNA solution based on sequence alignment to the Minimum Spanning Tree problem. Int. J. Bioinform. Res. Appl. 4(2): 188-200 (2008) - [j8]Wei-Lin Li, Peng Zhang, Daming Zhu:
On Constrained Facility Location Problems. J. Comput. Sci. Technol. 23(5): 740-748 (2008) - [j7]Yun Cui, Lusheng Wang
, Daming Zhu, Xiaowen Liu
:
A (1.5 + epsilon)-Approximation Algorithm for Unsigned Translocation Distance. IEEE ACM Trans. Comput. Biol. Bioinform. 5(1): 56-66 (2008) - [c15]Xiaowen Lou, Daming Zhu:
A 2.25-Approximation Algorithm for Cut-and-Paste Sorting of Unsigned Circular Permutations. COCOON 2008: 331-341 - [c14]Zhaofeng Su, Hongze Qiu, Daming Zhu, Haodi Feng:
New Evolutionary Subset: Application to Symbiotic Evolutionary Algorithm for Job-Shop Scheduling Problem. ICNC (1) 2008: 470-475 - [c13]Xiaowen Lou, Daming Zhu:
Genome Rearrangement Algorithms for Unsigned Permutations with O(logn) Singletons. TAMC 2008: 59-69 - [p1]Aili Han, Daming Zhu:
DNA Encoding Methods in the Field of DNA Computing. Computational Intelligence in Bioinformatics 2008: 293-322 - 2007
- [j6]Yun Cui, Lusheng Wang
, Daming Zhu:
A 1.75-approximation algorithm for unsigned translocation distance. J. Comput. Syst. Sci. 73(7): 1045-1059 (2007) - [j5]Jianxing Feng, Daming Zhu:
Faster algorithms for sorting by transpositions and sorting by block interchanges. ACM Trans. Algorithms 3(3): 25 (2007) - [c12]Hong Liu, Haodi Feng, Daming Zhu:
Prediction of Protein Subcellular Locations by Combining K-Local Hyperplane Distance Nearest Neighbor. ADMA 2007: 345-351 - [c11]Aili Han, Daming Zhu, Shouqiang Wang, Meixia Qu:
Algorithms for the Well-Drilling Layout Problem. ICIC (2) 2007: 263-271 - 2006
- [j4]Daming Zhu, Lusheng Wang
:
On the complexity of unsigned translocation distance. Theor. Comput. Sci. 352(1-3): 322-328 (2006) - [c10]Aili Han, Daming Zhu:
DNA Encoding Method of Weight for Chinese Postman Problem. IEEE Congress on Evolutionary Computation 2006: 681-686 - [c9]Aili Han, Daming Zhu:
A New DNA-Based Approach to Solve the Maximum Weight Clique Problem. ICIC (3) 2006: 320-327 - [c8]Aili Han, Daming Zhu:
A New DNA Encoding Method for Traveling Salesman Problem. ICIC (3) 2006: 328-335 - [c7]Aili Han, Daming Zhu:
Complexity Analysis for the HEWN Algorithm. ISDA (1) 2006: 1015-1019 - [c6]Aili Han, Daming Zhu:
DNA Computing Model for the Minimum Spanning Tree Problem. SYNASC 2006: 372-377 - [c5]Jianxing Feng, Daming Zhu:
Faster Algorithms for Sorting by Transpositions and Sorting by Block-Interchanges. TAMC 2006: 128-137 - 2005
- [j3]Lusheng Wang
, Daming Zhu, Xiaowen Liu
, Shaohan Ma:
An O(n2) algorithm for signed translocation. J. Comput. Syst. Sci. 70(3): 284-299 (2005) - [c4]Lusheng Wang, Daming Zhu, Xiaowen Liu, Shaohan Ma:
An O(N2) algorithm for signed translocation problem. APBC 2005: 349-358 - [c3]Hengwu Li, Daming Zhu:
A New Pseudoknots Folding Algorithm for RNA Structure Prediction. COCOON 2005: 94-103 - [c2]Yun Cui, Lusheng Wang
, Daming Zhu:
A 1.75-Approximation Algorithm for Unsigned Translocation Distance. ISAAC 2005: 392-401 - 2004
- [j2]Wangsen Feng, Lusheng Wang
, Daming Zhu:
CTRD: a fast applet for computing signed translocation distance between genomes. Bioinform. 20(17): 3256-3257 (2004) - 2001
- [j1]Daming Zhu, Junfeng Luan, Shaohan Ma:
Hardness and Methods to Solve CLIQUE. J. Comput. Sci. Technol. 16(4): 388-391 (2001)
1990 – 1999
- 1994
- [c1]Daming Zhu, Shaohan Ma, Hongze Qiu:
Analysis of the Convergency of Topology Preserving Neural Networks on Learning. ISAAC 1994: 128-136
Coauthor Index
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