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2024
[j21]
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Joaquim Estopinan, Maximilien Servajean, Pierre Bonnet, Alexis Joly, François Munoz:
Mapping global orchid assemblages with deep learning provides novel conservation insights. Ecol. Informatics 81: 102627 (2024)
[j20]
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Abel Yu Hao Chai, Sue Han Lee, Fei Siang Tay, Pierre Bonnet, Alexis Joly:
Beyond supervision: Harnessing self-supervised learning in unseen plant disease recognition. Neurocomputing 610: 128608 (2024)
[j19]
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Tanguy Lefort, Benjamin Charlier, Alexis Joly, Joseph Salmon:
Identify Ambiguous Tasks Combining Crowdsourced Labels by Weighting Areas Under the Margin. Trans. Mach. Learn. Res. 2024 (2024)
[j18]
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Olivier Beaumont, Lionel Eyraud-Dubois, Julien Herrmann, Alexis Joly, Alena Shilova:
Optimal Re-Materialization Strategies for Heterogeneous Chains: How to Train Deep Neural Networks with Limited Memory. ACM Trans. Math. Softw. 50(2): 10:1-10:38 (2024)
[c119]
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Alexis Joly, Lukás Picek, Stefan Kahl, Hervé Goëau, Vincent Espitalier, Christophe Botella, Diego Marcos, Joaquim Estopinan, César Leblanc, Théo Larcher, Milan Sulc, Marek Hrúz, Maximilien Servajean, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller:
Overview of LifeCLEF 2024: Challenges on Species Distribution Prediction and Identification. CLEF (2) 2024: 183-207
[c118]
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Stefan Kahl, Tom Denton, Holger Klinck, Vijay Ramesh, Viral Joshi, Meghana Srivathsa, Akshay Anand, Chiti Arvind, Harikrishnan Cp, Suyash Sawant, Robin Vv, Hervé Glotin, Hervé Goëau, Willem-Pier Vellinga, Robert Planqué, Alexis Joly:
Overview of BirdCLEF 2024: Acoustic identification of under-studied bird species in the Western Ghats. CLEF (Working Notes) 2024: 1948-1957
[c117]
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Lukás Picek, Christophe Botella, Maximilien Servajean, César Leblanc, Rémi Palard, Théo Larcher, Benjamin Deneu, Diego Marcos, Joaquim Estopinan, Pierre Bonnet, Alexis Joly:
Overview of GeoLifeCLEF 2024: Species Composition Prediction with High Spatial Resolution at Continental Scale using Remote Sensing. CLEF (Working Notes) 2024: 1966-1977
[c116]
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Hervé Goëau, Vincent Espitalier, Pierre Bonnet, Alexis Joly:
Overview of PlantCLEF 2024: Multi-species Plant Identification in Vegetation Plot Images. CLEF (Working Notes) 2024: 1978-1988
[c115]
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Alexis Joly, Lukás Picek, Stefan Kahl, Hervé Goëau, Vincent Espitalier, Christophe Botella, Benjamin Deneu, Diego Marcos, Joaquim Estopinan, César Leblanc, Théo Larcher, Milan Sulc, Marek Hrúz, Maximilien Servajean, Jirí Matas, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Andrew M. Durso, Ivan Eggel, Pierre Bonnet, Henning Müller:
LifeCLEF 2024 Teaser: Challenges on Species Distribution Prediction and Identification. ECIR (6) 2024: 19-27
[c114]
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Alexis Joly:
From Pl@ntNet to GeoPl@ntNet: new AI-based approaches for monitoring plant biodiversity. EGC 2024: 7-8
[i16]
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  - journals/corr/abs-2401-04691
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Joaquim Estopinan, Maximilien Servajean, Pierre Bonnet, Alexis Joly, François Munoz:
AI-based Mapping of the Conservation Status of Orchid Assemblages at Global Scale. CoRR abs/2401.04691 (2024)
[i15]
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  - journals/corr/abs-2401-05470
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Joaquim Estopinan, Pierre Bonnet, Maximilien Servajean, François Munoz, Alexis Joly:
Modelling Species Distributions with Deep Learning to Predict Plant Extinction Risk and Assess Climate Change Impacts. CoRR abs/2401.05470 (2024)
[i14]
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  - journals/corr/abs-2406-03356
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Tanguy Lefort, Antoine Affouard, Benjamin Charlier, Jean-Christophe Lombardo, Mathias Chouet, Hervé Goëau, Joseph Salmon, Pierre Bonnet, Alexis Joly:
Cooperative learning of Pl@ntNet's Artificial Intelligence algorithm: how does it work and how can we improve it? CoRR abs/2406.03356 (2024)
[i13]
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  - journals/corr/abs-2408-13928
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Lukás Picek, Christophe Botella, Maximilien Servajean, César Leblanc, Rémi Palard, Théo Larcher, Benjamin Deneu, Diego Marcos, Pierre Bonnet, Alexis Joly:
GeoPlant: Spatial Plant Species Prediction Dataset. CoRR abs/2408.13928 (2024)
[i12]
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  - journals/corr/abs-2409-17179
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Diego Marcos, Robert van de Vlasakker, Ioannis N. Athanasiadis, Pierre Bonnet, Hervé Goëau, Alexis Joly, W. Daniel Kissling, César Leblanc, André S. J. van Proosdij, Konstantinos P. Panousis:
Fully automatic extraction of morphological traits from the Web: utopia or reality? CoRR abs/2409.17179 (2024)
[i11]
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  - journals/corr/abs-2409-18102
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Théo Larcher, Lukás Picek, Benjamin Deneu, Titouan Lorieul, Maximilien Servajean, Alexis Joly:
MALPOLON: A Framework for Deep Species Distribution Modeling. CoRR abs/2409.18102 (2024)
2023
[j17]
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  - journals/tlsdkcs/AkbariniaBJMMO0P0PSV23
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Reza Akbarinia, Christophe Botella, Alexis Joly, Florent Masseglia, Marta Mattoso, Eduardo S. Ogasawara, Daniel de Oliveira, Esther Pacitti, Fábio Porto, Christophe Pradal, Dennis E. Shasha, Patrick Valduriez:
Life Science Workflow Services (LifeSWS): Motivations and Architecture. Trans. Large Scale Data Knowl. Centered Syst. 55: 1-24 (2023)
[c113]
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Alexis Joly, Christophe Botella, Lukás Picek, Stefan Kahl, Hervé Goëau, Benjamin Deneu, Diego Marcos, Joaquim Estopinan, César Leblanc, Théo Larcher, Rail Chamidullin, Milan Sulc, Marek Hrúz, Maximilien Servajean, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller:
Overview of LifeCLEF 2023: Evaluation of AI Models for the Identification and Prediction of Birds, Plants, Snakes and Fungi. CLEF 2023: 416-439
[c112]
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Stefan Kahl, Tom Denton, Holger Klinck, Hendrik Reers, Francis Cherutich, Hervé Glotin, Hervé Goëau, Willem-Pier Vellinga, Robert Planqué, Alexis Joly:
Overview of BirdCLEF 2023: Automated Bird Species Identification in Eastern Africa. CLEF (Working Notes) 2023: 1934-1942
[c111]
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Christophe Botella, Benjamin Deneu, Diego Marcos Gonzalez, Maximilien Servajean, Théo Larcher, César Leblanc, Joaquim Estopinan, Pierre Bonnet, Alexis Joly:
Overview of GeoLifeCLEF 2023: Species Composition Prediction with High Spatial Resolution at Continental Scale Using Remote Sensing. CLEF (Working Notes) 2023: 1954-1971
[c110]
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  - conf/clef/GoeauBJ23
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Overview of PlantCLEF 2023: Image-based Plant Identification at Global Scale. CLEF (Working Notes) 2023: 1972-1981
[c109]
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  - conf/ecir/JolyGKPBMSHLMSKCDGPVKDEBM23
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Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Christophe Botella, Diego Marcos, Milan Sulc, Marek Hrúz, Titouan Lorieul, Sara Si-Moussi, Maximilien Servajean, Benjamin Kellenberger, Elijah Cole, Andrew Durso, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller:
LifeCLEF 2023 Teaser: Species Identification and Prediction Challenges. ECIR (3) 2023: 568-576
[c108]
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  - conf/icip/ChaiLTTGBJ23
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Abel Yu Hao Chai, Sue Han Lee, Fei Siang Tay, Yi Lung Then, Hervé Goëau, Pierre Bonnet, Alexis Joly:
Pairwise Feature Learning for Unseen Plant Disease Recognition. ICIP 2023: 306-310
[i10]
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  - journals/corr/abs-2303-18118
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Camille Garcin, Maximilien Servajean, Alexis Joly, Joseph Salmon:
A two-head loss function for deep Average-K classification. CoRR abs/2303.18118 (2023)
2022
[c107]
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Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Andrew Durso, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Amanda Navine, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Milan Sulc, Marek Hrúz:
Overview of LifeCLEF 2022: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction. CLEF 2022: 257-285
[c106]
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  - conf/clef/GoeauBJ22
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Overview of PlantCLEF 2022: Image-based plant identification at global scale. CLEF (Working Notes) 2022: 1916-1928
[c105]
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Stefan Kahl, Amanda Navine, Tom Denton, Holger Klinck, Patrick Hart, Hervé Glotin, Hervé Goëau, Willem-Pier Vellinga, Robert Planqué, Alexis Joly:
Overview of BirdCLEF 2022: Endangered bird species recognition in soundscape recordings. CLEF (Working Notes) 2022: 1929-1939
[c104]
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  - conf/clef/LorieulCDSBJ22
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Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Pierre Bonnet, Alexis Joly:
Overview of GeoLifeCLEF 2022: Predicting Species Presence from Multi-modal Remote Sensing, Bioclimatic and Pedologic Data. CLEF (Working Notes) 2022: 1940-1956
[c103]
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  - conf/clef/LeblancJLSB22
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César Leblanc, Alexis Joly, Titouan Lorieul, Maximilien Servajean, Pierre Bonnet:
Species Distribution Modeling based on aerial images and environmental features with Convolutional Neural Networks. CLEF (Working Notes) 2022: 2123-2150
[c102]
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Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Andrew Durso, Isabelle Bolon, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller, Milan Sulc:
LifeCLEF 2022 Teaser: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction. ECIR (2) 2022: 390-399
[c101]
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  - conf/icml/GarcinSJS22
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Camille Garcin, Maximilien Servajean, Alexis Joly, Joseph Salmon:
Stochastic smoothing of the top-K calibrated hinge loss for deep imbalanced classification. ICML 2022: 7208-7222
[i9]
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  - journals/corr/abs-2202-02193
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Camille Garcin, Maximilien Servajean, Alexis Joly, Joseph Salmon:
Stochastic smoothing of the top-K calibrated hinge loss for deep imbalanced classification. CoRR abs/2202.02193 (2022)
[i8]
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  - journals/corr/abs-2208-08217
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Quentin Leroy, Olivier Buisson, Alexis Joly:
How does the degree of novelty impacts semi-supervised representation learning for novel class retrieval? CoRR abs/2208.08217 (2022)
[i7]
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  - journals/corr/abs-2209-15380
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Tanguy Lefort, Benjamin Charlier, Alexis Joly, Joseph Salmon:
Improve learning combining crowdsourced labels by weighting Areas Under the Margin. CoRR abs/2209.15380 (2022)
2021
[j16]
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  - journals/ploscb/DeneuSBBMJ21
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Benjamin Deneu, Maximilien Servajean, Pierre Bonnet, Christophe Botella, François Munoz, Alexis Joly:
Convolutional neural networks improve species distribution modelling by capturing the spatial structure of the environment. PLoS Comput. Biol. 17(4) (2021)
[j15]
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  - journals/sigir/CandanFFGIJLMMP21
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K. Selçuk Candan, Guglielmo Faggioli, Nicola Ferro, Lorraine Goeuriot, Bogdan Ionescu, Alexis Joly, Birger Larsen, Maria Maistro, Henning Müller, Florina Piroi:
Report on the 12th conference and labs of the evaluation forum (CLEF 2021): experimental IR meets multilinguality, multimodality, and interaction. SIGIR Forum 55(2): 15:1-15:12 (2021)
[c100]
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Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Andrew Durso, Isabelle Bolon, Hervé Glotin, Robert Planqué, Rafael Luis Ruiz De Castaneda, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller:
Overview of LifeCLEF 2021: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction. CLEF 2021: 371-393
[c99]
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Overview of PlantCLEF 2021: cross-domain plant identification. CLEF (Working Notes) 2021: 1422-1436
[c98]
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Stefan Kahl, Tom Denton, Holger Klinck, Hervé Glotin, Hervé Goëau, Willem-Pier Vellinga, Robert Planqué, Alexis Joly:
Overview of BirdCLEF 2021: Bird call identification in soundscape recordings. CLEF (Working Notes) 2021: 1437-1450
[c97]
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Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Pierre Bonnet, Alexis Joly:
Overview of GeoLifeCLEF 2021: Predicting species distribution from 2 million remote sensing images. CLEF (Working Notes) 2021: 1451-1462
[c96]
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  - conf/cluster/RosendoCASLJV21
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Daniel Rosendo, Alexandru Costan, Gabriel Antoniu, Matthieu Simonin, Jean-Christophe Lombardo, Alexis Joly, Patrick Valduriez:
Reproducible Performance Optimization of Complex Applications on the Edge-to-Cloud Continuum. CLUSTER 2021: 23-34
[c95]
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Alexis Joly, Hervé Goëau, Elijah Cole, Stefan Kahl, Lukás Picek, Hervé Glotin, Benjamin Deneu, Maximilien Servajean, Titouan Lorieul, Willem-Pier Vellinga, Pierre Bonnet, Andrew Durso, Rafael Luis Ruiz De Castaneda, Ivan Eggel, Henning Müller:
LifeCLEF 2021 Teaser: Biodiversity Identification and Prediction Challenges. ECIR (2) 2021: 601-607
[c94]
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Alexis Joly:
Pl@ntNet, la science des données au service de la biodiversité végétale. EGC 2021: 5-6
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Camille Garcin, Alexis Joly, Pierre Bonnet, Antoine Affouard, Jean-Christophe Lombardo, Mathias Chouet, Maximilien Servajean, Titouan Lorieul, Joseph Salmon:
Pl@ntNet-300K: a plant image dataset with high label ambiguity and a long-tailed distribution. NeurIPS Datasets and Benchmarks 2021
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Guglielmo Faggioli, Nicola Ferro, Alexis Joly, Maria Maistro, Florina Piroi:
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to - 24th, 2021. CEUR Workshop Proceedings 2936, CEUR-WS.org 2021 [contents]
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K. Selçuk Candan, Bogdan Ionescu, Lorraine Goeuriot, Birger Larsen, Henning Müller, Alexis Joly, Maria Maistro, Florina Piroi, Guglielmo Faggioli, Nicola Ferro:
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 12th International Conference of the CLEF Association, CLEF 2021, Virtual Event, September 21-24, 2021, Proceedings. Lecture Notes in Computer Science 12880, Springer 2021, ISBN 978-3-030-85250-4 [contents]
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Rafael S. Pereira, Alexis Joly, Patrick Valduriez, Fábio Porto:
Hyperspherical embedding for novel class classification. CoRR abs/2102.03243 (2021)
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  - journals/corr/abs-2108-04033
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Daniel Rosendo, Alexandru Costan, Gabriel Antoniu, Matthieu Simonin, Jean-Christophe Lombardo, Alexis Joly, Patrick Valduriez:
Reproducible Performance Optimization of Complex Applications on the Edge-to-Cloud Continuum. CoRR abs/2108.04033 (2021)
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Titouan Lorieul, Alexis Joly, Dennis E. Shasha:
Classification Under Ambiguity: When Is Average-K Better Than Top-K? CoRR abs/2112.08851 (2021)
2020
[j14]
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Sue Han Lee, Hervé Goëau, Pierre Bonnet, Alexis Joly:
New perspectives on plant disease characterization based on deep learning. Comput. Electron. Agric. 170: 105220 (2020)
[j13]
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Tom A. August, Oliver L. Pescott, Alexis Joly, Pierre Bonnet:
AI Naturalists Might Hold the Key to Unlocking Biodiversity Data in Social Media Imagery. Patterns 1(7): 100116 (2020)
[c92]
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Benjamin Deneu, Titouan Lorieul, Elijah Cole, Maximilien Servajean, Christophe Botella, Pierre Bonnet, Alexis Joly:
Overview of LifeCLEF Location-based Species Prediction Task 2020 (GeoLifeCLEF). CLEF (Working Notes) 2020
[c91]
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Benjamin Deneu, Maximilien Servajean, Pierre Bonnet, François Munoz, Alexis Joly:
Participation of LIRMM / Inria to the GeoLifeCLEF 2020 Challenge. CLEF (Working Notes) 2020
[c90]
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Overview of LifeCLEF Plant Identification task 2020. CLEF (Working Notes) 2020
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Alexis Joly, Hervé Goëau, Stefan Kahl, Benjamin Deneu, Maximilien Servajean, Elijah Cole, Lukás Picek, Rafael Luis Ruiz De Castañeda, Isabelle Bolon, Andrew Durso, Titouan Lorieul, Christophe Botella, Hervé Glotin, Julien Champ, Ivan Eggel, Willem-Pier Vellinga, Pierre Bonnet, Henning Müller:
Overview of LifeCLEF 2020: A System-Oriented Evaluation of Automated Species Identification and Species Distribution Prediction. CLEF 2020: 342-363
[c88]
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Stefan Kahl, Mary Clapp, W. Alexander Hopping, Hervé Goëau, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Alexis Joly:
Overview of BirdCLEF 2020: Bird Sound Recognition in Complex Acoustic Environments. CLEF (Working Notes) 2020
[c87]
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Juan Villacis-Llobet, Hervé Goëau, Pierre Bonnet, Alexis Joly, Erick Mata-Montero:
Domain Adaptation in the Context of Herbarium Collections: A submission to PlantCLEF 2020. CLEF (Working Notes) 2020
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Alexis Joly, Hervé Goëau, Stefan Kahl, Christophe Botella, Rafael Luis Ruiz De Castaneda, Hervé Glotin, Elijah Cole, Julien Champ, Benjamin Deneu, Maximilien Servajean, Titouan Lorieul, Willem-Pier Vellinga, Fabian-Robert Stöter, Andrew Durso, Pierre Bonnet, Henning Müller:
LifeCLEF 2020 Teaser: Biodiversity Identification and Prediction Challenges. ECIR (2) 2020: 542-549
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Benjamin Deneu, Alexis Joly, Pierre Bonnet, Maximilien Servajean, François Munoz:
How Do Deep Convolutional SDM Trained on Satellite Images Unravel Vegetation Ecology? ICPR Workshops (6) 2020: 148-158
[c84]
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Sue Han Lee, Hervé Goëau, Pierre Bonnet, Alexis Joly:
Conditional Multi-Task learning for Plant Disease Identification. ICPR 2020: 3320-3327
[i3]
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  - journals/corr/abs-2004-04192
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Elijah Cole, Benjamin Deneu, Titouan Lorieul, Maximilien Servajean, Christophe Botella, Dan Morris, Nebojsa Jojic, Pierre Bonnet, Alexis Joly:
The GeoLifeCLEF 2020 Dataset. CoRR abs/2004.04192 (2020)

2010 – 2019

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2019
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Kwangjin Park, Alexis Joly, Patrick Valduriez:
DZI: An air index for spatial queries in one-dimensional channels. Data Knowl. Eng. 124 (2019)
[c83]
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Christophe Botella, Maximilien Servajean, Pierre Bonnet, Alexis Joly:
Overview of GeoLifeCLEF 2019: Plant Species Prediction using Environment and Animal Occurrences. CLEF (Working Notes) 2019
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Benjamin Deneu, Maximilien Servajean, Christophe Botella, Alexis Joly:
Evaluation of Deep Species Distribution Models Using Environment and Co-occurrences. CLEF 2019: 213-225
[c81]
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Overview of LifeCLEF Plant Identification Task 2019: diving into Data Deficient Tropical Countries. CLEF (Working Notes) 2019
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Alexis Joly, Hervé Goëau, Christophe Botella, Stefan Kahl, Maximilien Servajean, Hervé Glotin, Pierre Bonnet, Robert Planqué, Fabian-Robert Stöter, Willem-Pier Vellinga, Henning Müller:
Overview of LifeCLEF 2019: Identification of Amazonian Plants, South & North American Birds, and Niche Prediction. CLEF 2019: 387-401
[c79]
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Stefan Kahl, Fabian-Robert Stöter, Hervé Goëau, Hervé Glotin, Bob Planqué, Willem-Pier Vellinga, Alexis Joly:
Overview of BirdCLEF 2019: Large-Scale Bird Recognition in Soundscapes. CLEF (Working Notes) 2019
[c78]
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Mathilde Negri, Maximilien Servajean, Benjamin Deneu, Alexis Joly:
Location-Based Plant Species Prediction Using A CNN Model Trained On Several Kingdoms - Best Method Of GeoLifeCLEF 2019 Challenge. CLEF (Working Notes) 2019
[c77]
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Alexis Joly, Hervé Goëau, Christophe Botella, Stefan Kahl, Marion Poupard, Maximilien Servajean, Hervé Glotin, Pierre Bonnet, Willem-Pier Vellinga, Robert Planqué, Jan Schlüter, Fabian-Robert Stöter, Henning Müller:
LifeCLEF 2019: Biodiversity Identification and Prediction Challenges. ECIR (2) 2019: 275-282
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Alexis Joly, Hervé Goëau, Hervé Glotin, Concetto Spampinato, Pierre Bonnet, Willem-Pier Vellinga, Jean-Christophe Lombardo, Robert Planqué, Simone Palazzo, Henning Müller:
Biodiversity Information Retrieval Through Large Scale Content-Based Identification: A Long-Term Evaluation. Information Retrieval Evaluation in a Changing World 2019: 389-413
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  - journals/corr/abs-1909-08825
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Benjamin Deneu, Maximilien Servajean, Christophe Botella, Alexis Joly:
Evaluation of Deep Species Distribution Models using Environment and Co-occurrences. CoRR abs/1909.08825 (2019)
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  - journals/corr/abs-1911-13214
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Olivier Beaumont, Lionel Eyraud-Dubois, Julien Herrmann, Alexis Joly, Alena Shilova:
Optimal checkpointing for heterogeneous chains: how to train deep neural networks with limited memory. CoRR abs/1911.13214 (2019)
2018
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Maximilien Servajean, Romain Chailan, Alexis Joly:
Non-parametric Bayesian annotator combination. Inf. Sci. 436-437: 131-145 (2018)
[c76]
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Christophe Botella, Pierre Bonnet, François Munoz, Pascal Monestiez, Alexis Joly:
Overview of GeoLifeCLEF 2018: Location-based Species Recommendation. CLEF (Working Notes) 2018
[c75]
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Benjamin Deneu, Maximilien Servajean, Christophe Botella, Alexis Joly:
Location-based Species Recommendation using Co-occurrences and Environment- GeoLifeCLEF 2018 Challenge. CLEF (Working Notes) 2018
[c74]
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Overview of ExpertLifeCLEF 2018: how far Automated Identification Systems are from the Best Experts? CLEF (Working Notes) 2018
[c73]
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Hervé Goëau, Stefan Kahl, Hervé Glotin, Bob Planqué, Willem-Pier Vellinga, Alexis Joly:
Overview of BirdCLEF 2018: Monospecies vs. Sundscape Bird Identification. CLEF (Working Notes) 2018
[c72]
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Alexis Joly, Hervé Goëau, Christophe Botella, Hervé Glotin, Pierre Bonnet, Willem-Pier Vellinga, Robert Planqué, Henning Müller:
Overview of LifeCLEF 2018: A Large-Scale Evaluation of Species Identification and Recommendation Algorithms in the Era of AI. CLEF 2018: 247-266
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Alexis Joly, Pierre Bonnet, Stefanos Vrochidis, Kostas D. Karatzas, Ari Karppinen:
Introduction. Multimedia Tools and Applications for Environmental & Biodiversity Informatics 2018: 1-7
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Pierre Bonnet, Hervé Goëau, Siang Thye Hang, Mario Lasseck, Milan Sulc, Valéry Malécot, Philippe Jauzein, Jean-Claude Melet, Christian You, Alexis Joly:
Plant Identification: Experts vs. Machines in the Era of Deep Learning - Deep Learning Techniques Challenge Flora Experts. Multimedia Tools and Applications for Environmental & Biodiversity Informatics 2018: 131-149
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Jose Carranza-Rojas, Alexis Joly, Hervé Goëau, Erick Mata-Montero, Pierre Bonnet:
Automated Identification of Herbarium Specimens at Different Taxonomic Levels. Multimedia Tools and Applications for Environmental & Biodiversity Informatics 2018: 151-167
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Christophe Botella, Alexis Joly, Pierre Bonnet, Pascal Monestiez, François Munoz:
A Deep Learning Approach to Species Distribution Modelling. Multimedia Tools and Applications for Environmental & Biodiversity Informatics 2018: 169-199
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Alexis Joly, Stefanos Vrochidis, Kostas D. Karatzas, Ari Karppinen, Pierre Bonnet:
Multimedia Tools and Applications for Environmental & Biodiversity Informatics. Springer 2018, ISBN 978-3-319-76444-3 [contents]
2017
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Maximilien Servajean, Alexis Joly, Dennis E. Shasha, Julien Champ, Esther Pacitti:
Crowdsourcing Thousands of Specialized Labels: A Bayesian Active Training Approach. IEEE Trans. Multim. 19(6): 1376-1391 (2017)
[c71]
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Plant Identification Based on Noisy Web Data: the Amazing Performance of Deep Learning (LifeCLEF 2017). CLEF (Working Notes) 2017
[c70]
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Hervé Goëau, Hervé Glotin, Willem-Pier Vellinga, Bob Planqué, Alexis Joly:
LifeCLEF Bird Identification Task 2017. CLEF (Working Notes) 2017
[c69]
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Sue Han Lee, Yang Loong Chang, Chee Seng Chan, Alexis Joly, Pierre Bonnet, Hervé Goëau:
Plant Classification Based on Gated Recurrent Unit. CLEF 2017: 169-180
[c68]
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Alexis Joly, Hervé Goëau, Hervé Glotin, Concetto Spampinato, Pierre Bonnet, Willem-Pier Vellinga, Jean-Christophe Lombardo, Robert Planqué, Simone Palazzo, Henning Müller:
LifeCLEF 2017 Lab Overview: Multimedia Species Identification Challenges. CLEF 2017: 255-274
[c67]
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Antoine Affouard, Hervé Goëau, Pierre Bonnet, Jean-Christophe Lombardo, Alexis Joly:
Pl@ntNet app in the era of deep learning. ICLR (Workshop) 2017
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Alexis Joly, Pierre Bonnet, Antoine Affouard, Jean-Christophe Lombardo, Hervé Goëau:
Pl@ntNet - My Business. ACM Multimedia 2017: 551-555
2016
[j9]
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Alexis Joly, Pierre Bonnet, Hervé Goëau, Julien Barbe, Souheil Selmi, Julien Champ, Samuel Dufour-Kowalski, Antoine Affouard, Jennifer Carré, Jean-François Molino, Nozha Boujemaa, Daniel Barthélémy:
A look inside the Pl@ntNet experience - The good, the bias and the hope. Multim. Syst. 22(6): 751-766 (2016)
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Stefanos Vrochidis, Kostas D. Karatzas, Ari Karppinen, Alexis Joly:
Guest Editorial: Environmental Multimedia Retrieval. Multim. Tools Appl. 75(3): 1557-1562 (2016)
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Pierre Bonnet, Alexis Joly, Hervé Goëau, Julien Champ, Christel Vignau, Jean-François Molino, Daniel Barthélémy, Nozha Boujemaa:
Plant identification: man vs. machine - LifeCLEF 2014 plant identification challenge. Multim. Tools Appl. 75(3): 1647-1665 (2016)
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Julien Champ, Titouan Lorieul, Pierre Bonnet, Najate Maghnaoui, Christophe Sereno, Thierry Dessup, Jean-Michel Boursiquot, Laurent Audeguin, Thierry Lacombe, Alexis Joly:
Categorizing plant images at the variety level: Did you say fine-grained? Pattern Recognit. Lett. 81: 71-79 (2016)
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Alexis Joly, Hervé Goëau, Hervé Glotin, Concetto Spampinato, Pierre Bonnet, Willem-Pier Vellinga, Julien Champ, Robert Planqué, Simone Palazzo, Henning Müller:
LifeCLEF 2016: Multimedia Life Species Identification Challenges. CLEF 2016: 286-310
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
Plant Identification in an Open-world (LifeCLEF 2016). CLEF (Working Notes) 2016: 428-439
[c63]
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Hervé Goëau, Hervé Glotin, Willem-Pier Vellinga, Robert Planqué, Alexis Joly:
LifeCLEF Bird Identification Task 2016: The arrival of Deep learning. CLEF (Working Notes) 2016: 440-449
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Julien Champ, Hervé Goëau, Alexis Joly:
Floristic participation at LifeCLEF 2016 Plant Identification Task. CLEF (Working Notes) 2016: 450-458
[c61]
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Alexis Joly, Jean-Christophe Lombardo, Julien Champ, Anjara Saloma:
Unsupervised Individual Whales Identification: Spot the Difference in the Ocean. CLEF (Working Notes) 2016: 469-480
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Valentin Leveau, Alexis Joly, Olivier Buisson, Patrick Valduriez:
Spatially Localized Visual Dictionary Learning. ICMR 2016: 367-370
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Maximilien Servajean, Alexis Joly, Dennis E. Shasha, Julien Champ, Esther Pacitti:
ThePlantGame: Actively Training Human Annotators for Domain-specific Crowdsourcing. ACM Multimedia 2016: 720-721
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Alexis Joly, Hervé Goëau, Julien Champ, Samuel Dufour-Kowalski, Henning Müller, Pierre Bonnet:
Crowdsourcing Biodiversity Monitoring: How Sharing your Photo Stream can Sustain our Planet. ACM Multimedia 2016: 958-967
2015
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Alexis Joly:
Large-scale Content-based Visual Information Retrieval. University of Montpellier, France, 2015
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Julien Champ, Titouan Lorieul, Maximilien Servajean, Alexis Joly:
A Comparative Study of Fine-grained Classification Methods in the Context of the LifeCLEF Plant Identification Challenge 2015. CLEF (Working Notes) 2015
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Hervé Goëau, Pierre Bonnet, Alexis Joly:
LifeCLEF Plant Identification Task 2015. CLEF (Working Notes) 2015
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Hervé Goëau, Hervé Glotin, Willem-Pier Vellinga, Robert Planqué, Andreas Rauber, Alexis Joly:
LifeCLEF Bird Identification Task 2015. CLEF (Working Notes) 2015
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Alexis Joly, Hervé Goëau, Hervé Glotin, Concetto Spampinato, Pierre Bonnet, Willem-Pier Vellinga, Robert Planqué, Andreas Rauber, Simone Palazzo, Bob Fisher, Henning Müller:
LifeCLEF 2015: Multimedia Life Species Identification Challenges. CLEF 2015: 462-483
[c53]
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Alexis Joly, Valentin Leveau, Julien Champ, Olivier Buisson:
Shared Nearest Neighbors Match Kernel for Bird Songs Identification - LifeCLEF 2015 Challenge. CLEF (Working Notes) 2015
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Valentin Leveau, Alexis Joly, Olivier Buisson, Patrick Valduriez:
Kernelizing Spatially Consistent Visual Matches for Fine-Grained Classification. ICMR 2015: 155-162
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Pierre Letessier, Nicolas Hervé, Alexis Joly, Hakim Nabi, Mathieu Derval, Olivier Buisson:
DigInPix: Visual Named-Entities Identification in Images and Videos. ICMR 2015: 661-664
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Stefanos Vrochidis, Kostas D. Karatzas, Ari Karppinen, Alexis Joly, Alexandra Branzan Albu:
Proceedings of the 2nd International Workshop on Environmental Multimedia Retrieval, EMR@ICMR 2015, Shanghai, China, June 23-26, 2015. ACM 2015, ISBN 978-1-4503-3558-4 [contents]
2014
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Alexis Joly, Hervé Goëau, Pierre Bonnet, Vera Bakic, Julien Barbe, Souheil Selmi, Itheri Yahiaoui, Jennifer Carré, Elise Mouysset, Jean-François Molino, Nozha Boujemaa, Daniel Barthélémy:
Interactive plant identification based on social image data. Ecol. Informatics 23: 22-34 (2014)
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Amel Hamzaoui, Pierre Letessier, Alexis Joly, Olivier Buisson, Nozha Boujemaa:
Object-based visual query suggestion. Multim. Tools Appl. 68(2): 429-454 (2014)
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Alexis Joly, Hervé Goëau, Hervé Glotin, Concetto Spampinato, Pierre Bonnet, Willem-Pier Vellinga, Robert Planqué, Andreas Rauber, Robert B. Fisher, Henning Müller:
LifeCLEF 2014: Multimedia Life Species Identification Challenges. CLEF 2014: 229-249
[c49]
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Hervé Goëau, Hervé Glotin, Willem-Pier Vellinga, Robert Planqué, Andreas Rauber, Alexis Joly:
LifeCLEF Bird Identication Task 2014. CLEF (Working Notes) 2014: 585-597
[c48]
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Alexis Joly, Hervé Goëau:
LifeCLEF Plant Identification Task 2014. CLEF (Working Notes) 2014: 598-615
[c47]
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Alexis Joly, Julien Champ, Olivier Buisson:
Instance-based Bird Species Identification with Undiscriminant Features Pruning. CLEF (Working Notes) 2014: 625-633
[c46]
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Hervé Goëau, Alexis Joly, Itheri Yahiaoui:
PlantNet Participation at LifeCLEF2014 Plant Identification Task. CLEF (Working Notes) 2014: 724-737
[c45]
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Alexis Joly, Henning Müller, Hervé Goëau, Hervé Glotin, Concetto Spampinato, Andreas Rauber, Pierre Bonnet, Willem-Pier Vellinga, Robert B. Fisher, Robert Planqué:
LifeCLEF: Multimedia life species identification. EMR@ICMR 2014: 7-13
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Hervé Goëau, Pierre Bonnet, Alexis Joly, Antoine Affouard, Vera Bakic, Julien Barbe, Samuel Dufour, Souheil Selmi, Itheri Yahiaoui, Christel Vignau, Daniel Barthélémy, Nozha Boujemaa:
Pl@ntNet Mobile 2014: Android port and new features. ICMR 2014: 527
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Alexis Joly, Hervé Goëau, Pierre Bonnet, Concetto Spampinato, Hervé Glotin, Andreas Rauber, Willem-Pier Vellinga, Robert B. Fisher, Henning Müller:
Are Species Identification Tools Biodiversity-friendly? MAED@MM 2014: 31-36
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Julien Champ, Alexis Joly, Pierre Bonnet:
Fine-grained Visual Faceted Search. ACM Multimedia 2014: 721-722
[c41]
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Valentin Leveau, Alexis Joly, Olivier Buisson, Pierre Letessier, Patrick Valduriez:
Recognizing Thousands of Legal Entities through Instance-based Visual Classification. ACM Multimedia 2014: 1029-1032
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Stefanos Vrochidis, Kostas D. Karatzas, Ari Karppinen, Alexis Joly:
Proceedings of the 1st International Workshop on Environnmental Multimedia Retrieval co-located with ACM International Conference on Multimedia Retrieval, EMR@ICMR 2014, Glasgow, UK, April 1, 2014. CEUR Workshop Proceedings 1222, CEUR-WS.org 2014 [contents]
2013
[c40]
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Vera Bakic, Sofiène Mouine, Saloua Ouertani-Litayem, Anne Verroust-Blondet, Itheri Yahiaoui, Hervé Goëau, Alexis Joly:
Inria's Participation at ImageCLEF 2013 Plant Identification Task. CLEF (Working Notes) 2013
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Barbara Caputo, Henning Müller, Bart Thomee, Mauricio Villegas, Roberto Paredes, David Zellhöfer, Hervé Goëau, Alexis Joly, Pierre Bonnet, Jesus Martínez-Gómez, Ismael García-Varea, Miguel Cazorla:
ImageCLEF 2013: The Vision, the Data and the Open Challenges. CLEF 2013: 250-268
[c38]
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Hervé Goëau, Pierre Bonnet, Alexis Joly, Vera Bakic, Daniel Barthélémy, Nozha Boujemaa, Jean-François Molino:
The ImageCLEF 2013 Plant Identification Task. CLEF (Working Notes) 2013
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Hervé Goëau, Alexis Joly, Pierre Bonnet, Vera Bakic, Daniel Barthélémy, Nozha Boujemaa, Jean-François Molino:
The imageCLEF plant identification task 2013. MAED@ACM Multimedia 2013: 23-28
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Pierre Letessier, Nicolas Hervé, Julien Champ, Alexis Joly, Olivier Buisson, Amel Hamzaoui:
Small objects query suggestion in a large web-image collection. ACM Multimedia 2013: 417-418
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Hervé Goëau, Pierre Bonnet, Alexis Joly, Vera Bakic, Julien Barbe, Itheri Yahiaoui, Souheil Selmi, Jennifer Carré, Daniel Barthélémy, Nozha Boujemaa, Jean-François Molino, Grégoire Duché, Aurélien Péronnet:
Pl@ntNet mobile app. ACM Multimedia 2013: 423-424
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Nicolas Hervé, Marie-Luce Viaud, Jérôme Thièvre, Agnès Saulnier, Julien Champ, Pierre Letessier, Olivier Buisson, Alexis Joly:
OTMedia: the French TransMedia news observatory. ACM Multimedia 2013: 441-442
2012
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Ahmed Rebai, Alexis Joly, Nozha Boujemaa:
BLasso for object categorization and retrieval: Towards interpretable visual models. Pattern Recognit. 45(6): 2377-2389 (2012)
[c33]
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Saloua Litayem, Alexis Joly, Nozha Boujemaa:
Hash-Based Support Vector Machines Approximation for Large Scale Prediction. BMVC 2012: 1-11
[c32]
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Vera Bakic, Itheri Yahiaoui, Sofiène Mouine, Saloua Litayem, Wajih Ouertani, Anne Verroust-Blondet, Hervé Goëau, Alexis Joly:
Inria IMEDIA2's Participation at ImageCLEF 2012 Plant Identification Task. CLEF (Online Working Notes/Labs/Workshop) 2012
[c31]
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Hervé Goëau, Pierre Bonnet, Alexis Joly, Itheri Yahiaoui, Daniel Barthélémy, Nozha Boujemaa, Jean-François Molino:
The ImageCLEF 2012 Plant Identification Task. CLEF (Online Working Notes/Labs/Workshop) 2012
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Mohamed Riadh Trad, Alexis Joly, Nozha Boujemaa:
Large Scale KNN-Graph Approximation. ICDM Workshops 2012: 439-448
[c29]
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Mohamed Riadh Trad, Alexis Joly, Nozha Boujemaa:
Distributed KNN-graph approximation via hashing. ICMR 2012: 43
[c28]
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Amel Hamzaoui, Alexis Joly, Hervé Goëau:
Plant leaves morphological categorization with shared nearest neighbours clustering. MAED@ACM Multimedia 2012: 37-40
[c27]
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Hervé Goëau, Pierre Bonnet, Julien Barbe, Vera Bakic, Alexis Joly, Jean-François Molino, Daniel Barthélémy, Nozha Boujemaa:
Multi-organ plant identification. MAED@ACM Multimedia 2012: 41-44
[c26]
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Pierre Letessier, Olivier Buisson, Alexis Joly:
Scalable mining of small visual objects. ACM Multimedia 2012: 599-608
[c25]
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Alexis Joly, Julien Champ, Pierre Letessier, Nicolas Hervé, Olivier Buisson, Marie-Luce Viaud:
Visual-based transmedia events detection. ACM Multimedia 2012: 1351-1352
2011
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Amel Hamzaoui, Alexis Joly, Nozha Boujemaa:
Multi-source shared nearest neighbours for multi-modal image clustering. Multim. Tools Appl. 51(2): 479-503 (2011)
[c24]
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Hervé Goëau, Pierre Bonnet, Alexis Joly, Nozha Boujemaa, Daniel Barthélémy, Jean-François Molino, Philippe Birnbaum, Elise Mouysset, Marie Picard:
The CLEF 2011 Plant Images Classification Task. CLEF (Notebook Papers/Labs/Workshop) 2011
[c23]
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Hervé Goëau, Alexis Joly, Itheri Yahiaoui, Pierre Bonnet, Elise Mouysset:
Participation of INRIA & Pl@ntNet to ImageCLEF 2011 Plant Images Classification Task. CLEF (Notebook Papers/Labs/Workshop) 2011
[c22]
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Alexis Joly, Olivier Buisson:
Random maximum margin hashing. CVPR 2011: 873-880
[c21]
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Ahmed Rebai, Alexis Joly, Nozha Boujemaa:
Interpretable visual models for human perception-based object retrieval. ICMR 2011: 21
[c20]
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Pierre Letessier, Olivier Buisson, Alexis Joly:
Consistent visual words mining with adaptive sampling. ICMR 2011: 49
[c19]
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Mohamed Riadh Trad, Alexis Joly, Nozha Boujemaa:
Large scale visual-based event matching. ICMR 2011: 53
[c18]
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Hervé Goëau, Alexis Joly, Souheil Selmi, Pierre Bonnet, Elise Mouysset, Laurent Joyeux, Jean-François Molino, Philippe Birnbaum, Daniel Barthélémy, Nozha Boujemaa:
Visual-based plant species identification from crowdsourced data. ACM Multimedia 2011: 813-814
2010
[c17]
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Amel Hamzaoui, Alexis Joly, Nozha Boujemaa:
Multi-source RSC model for multiple search result clustering. WIAMIS 2010: 1-4

2000 – 2009

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2009
[c16]
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Saloua Litayem, Alexis Joly, Nozha Boujemaa:
Interactive objects retrieval with efficient boosting. ACM Multimedia 2009: 545-548
[c15]
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Alexis Joly, Olivier Buisson:
Logo retrieval with a contrario visual query expansion. ACM Multimedia 2009: 581-584
[c14]
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Christos Diou, Nikos Dimitriou, Panagiotis Panagiotopoulos, Christos Papachristou, Anastasios Delopoulos, George Stephanopoulos, Henning Rode, Theodora Tsikrika, Arjen P. de Vries, Daniel Schneider, Jochen Schwenninger, Marie-Luce Viaud, Agnès Saulnier, Peter Altendorf, Birgit Schröter, Matthias Elser, Angel Rego, Alex Rodriguez, Cristina Martínez, Iñaki Etxaniz, Gérard Dupont, Bruno Grilhères, Nicolas Martin, Nozha Boujemaa, Alexis Joly, Raffi Enficiaud, Anne Verroust, Souheil Selmi, Mondher Khadhraoui:
VITALAS at TRECVID-2009. TRECVID 2009
2008
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Alexis Joly, Olivier Buisson:
A posteriori multi-probe locality sensitive hashing. ACM Multimedia 2008: 209-218
[c12]
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Alexis Joly, Julien Law-To, Nozha Boujemaa:
INRIA-IMEDIA TRECVID 2008: Video Copy Detection. TRECVID 2008
2007
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Alexis Joly, Olivier Buisson, Carl Frélicot:
Content-Based Copy Retrieval Using Distortion-Based Probabilistic Similarity Search. IEEE Trans. Multim. 9(2): 293-306 (2007)
[c11]
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Ahmed Rebai, Alexis Joly, Nozha Boujemaa:
Interpretability based interest points detection. CIVR 2007: 33-40
[c10]
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  - conf/civr/Law-ToJJBBG07
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Julien Law-To, Alexis Joly, Laurent Joyeux, Nozha Boujemaa, Olivier Buisson, Valérie Gouet-Brunet:
Video and image copy detection demo. CIVR 2007: 97-100
[c9]
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Julien Law-To, Li Chen, Alexis Joly, Ivan Laptev, Olivier Buisson, Valérie Gouet-Brunet, Nozha Boujemaa, Fred Stentiford:
Video copy detection: a comparative study. CIVR 2007: 371-378
[c8]
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Alexis Joly:
New local descriptors based on dissociated dipoles. CIVR 2007: 573-580
2006
[c7]
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Ahmed Rebai, Alexis Joly, Nozha Boujemaa:
Constant tangential angle elected interest points. Multimedia Information Retrieval 2006: 203-212
2005
[c6]
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Alexis Joly, Olivier Buisson, Carl Frélicot:
Statistical similarity search applied to content-based video copy detection. BDA 2005
[c5]
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Alexis Joly, Olivier Buisson, Carl Frélicot:
Statistical similarity search applied to content-based video copy detection. ICDE Workshops 2005: 1285
[c4]
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Alexis Joly, Carl Frélicot, Olivier Buisson:
Content-based video copy detection in large databases: a local fingerprints statistical similarity search approach. ICIP (1) 2005: 505-508
[c3]
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Alexis Joly, Olivier Buisson:
Discriminant local features selection using efficient density estimation in a large database. Multimedia Information Retrieval 2005: 201-208
2004
[c2]
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Alexis Joly, Carl Frélicot, Olivier Buisson:
Feature statistical retrieval applied to content-based copy identification. ICIP 2004: 681-684
2003
[c1]
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Alexis Joly, Carl Frélicot, Olivier Buisson:
Robust Content-Based Video Copy Identification in a Large Reference Database. CIVR 2003: 414-424

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