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- research-articleApril 2021
Volcano eruption algorithm for solving optimization problems
Neural Computing and Applications (NCAA), Volume 33, Issue 7Apr 2021, Pages 2321–2337https://doi.org/10.1007/s00521-020-05124-xAbstractMeta-heuristic algorithms have been proposed to solve several optimization problems in different research areas due to their unique attractive features. Traditionally, heuristic approaches are designed separately for discrete and continuous ...
- research-articleMay 2011
GO-Module
Bioinformatics (BIOI), Volume 27, Issue 10May 2011, Pages 1444–1446https://doi.org/10.1093/bioinformatics/btr142Summary: GO-Module is a web-accessible synthesis and visualization tool developed for end-user biologists to greatly simplify the interpretation of prioritized Gene Ontology (GO) terms. GO-Module radically reduces the complexity of raw GO results ...
- research-articleJune 2010
Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data
Journal of Biomedical Informatics (JOBI), Volume 43, Issue 3June, 2010, Pages 376–384https://doi.org/10.1016/j.jbi.2010.04.006BackgroundKinase inhibition is an increasingly popular strategy for pharmacotherapy of human diseases. Although many of these agents have been described as "targeted therapy", they will typically inhibit multiple kinases with varying potency. Pre-...
- ArticleAugust 2009
SVM-Based Approach for Predicting DNA-Binding Residues in Proteins from Amino Acid Sequences
IJCBS '09: Proceedings of the 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent ComputingAugust 2009, Pages 225–229https://doi.org/10.1109/IJCBS.2009.33Protein-DNA interactions are vitally important in a wide range of biological processes such as gene regulation and DNA replication and repair. We predict DNA-binding residues in proteins from amino acid sequences by support vector machine (SVM) with a ...
- otherSeptember 2006
OrderedList---a bioconductor package for detecting similarity in ordered gene lists
Bioinformatics (BIOI), Volume 22, Issue 18September 2006, Pages 2315–2316https://doi.org/10.1093/bioinformatics/btl385Summary: OrderedList is a Bioconductor compliant package for meta-analysis based on ordered gene lists like those resulting from differential gene expression analysis. Our package quantifies the similarity between gene lists. The significance of ...