Abstract
We present the INSYSE method for the annotation of texts, based on extraction of semantic relations from syntactic structures. We apply this method to a corpus of 5000 Medline abstracts about central nervous system diseases and gene interactions. Our cooperative approach focuses on (1) extracting lexico-syntactic information from sentences in the corpus comprising causation lexemes and (2) elaborating unification grammar rules which enable to extract instantiated conceptual schemas from this information. They are translated into RDF annotations which used by the semantic search engine Corese to query the corpus about functions of genes and their correlations with particular diseases.
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References
Aussenac-Gilles, N., Biebow, B., Sulzman, S.: Revisiting Ontology Design: a methodology based on corpus analysis. In: Proceedings of EKAW 2000, pp. 172–188 (2000)
Bourigault, D., Fabre, C.: Approche linguistique pour l’analyse syntaxique de corpus. Cahiers de Grammaires 25, 131–151 (2000)
Briscoe, T., Carroll, J.: Robust accurate statistical annotation of general text. In: Proceedings of LREC 2002, pp. 1499–1504 (2002)
Buitelaar, P., Olejnik, D., Sintek, M.: A Protege plug-in for ontology extraction from text based on linguistic analysis. In: Proceedings of ESWS 2004 (2004)
Corby, O., Dieng-Kuntz, R., Faron-Zucker, C.: Querying the semantic web with the Corese search engine. In: Proceedings of ECAI’2004, pp. 705–709 (2004)
Dumas, L., Plante, A., Plante, P.: ALN : Analyseur Linguistique de ALN. ATO, UQAM (1997)
Faure, D., Nédellec, C.: A corpus-based conceptual clustering method for verb frames and ontology acquisition. In: Proceedings of LREC workshop on Adapting lexical and corpus resources to sublanguages and applications, pp. 5–12 (1998)
Garcia, D.: COATIS: a NLP system to locate expressions of actions connected by causality links. In: Proceedings of EKAW 1997, pp. 347–352 (1997)
Maedche, A., Staab, S.: Comparing Ontologies: Similarity Measures and a Comparison Study. Internal Report, University of Karlsruhe (2001)
Nuyts, J.: Aspects of a Cognitive-Pragmatic Theory of Language. Benjamins (1992)
Rector, A., Gangemi, A., Galeazzi, E., Glowinski, A., Rossi-Mori, A.: The GALEN Model Schemata for Anatomy. In: Proceedings of MIE 1994 (1994)
Shieber, S.M.: An Introduction to Unification-Based Approaches to Grammar. CSLI Lecture Notes Series, vol. 4. University of Chicago Press, Chicago (1986)
Wang, H., Azuaje, F., Bodenreider, O., Dopazo, J.: Gene Expression Correlation and Gene Ontology-Based Similarity: An Assessment of Quantitative Relationships. In: Proceedings of CIBCB 2004, pp. 25–31 (2004)
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Alamarguy, L., Dieng-Kuntz, R., Faron-Zucker, C. (2005). Extraction of Lexico-Syntactic Information and Acquisition of Causality Schemas for Text Annotation. In: Khosla, R., Howlett, R.J., Jain, L.C. (eds) Knowledge-Based Intelligent Information and Engineering Systems. KES 2005. Lecture Notes in Computer Science(), vol 3683. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11553939_164
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DOI: https://doi.org/10.1007/11553939_164
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