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An Algorithm for a Generalized Maximum Subsequence Problem

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LATIN 2006: Theoretical Informatics (LATIN 2006)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3887))

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Abstract

We consider a generalization of the maximum subsequence problem. Given an array a 1,...,a n of real numbers, the generalized problem consists in finding an interval [i,j] such that the length and the sum of the subsequence a i ,...,a j maximize a given quasiconvex function f. Problems of this type occur, e.g., in bioinformatics. We show that the generalized problem can be solved in time O(n log n). As an example, we show how the so-called multiresolution criteria problem can be solved in time O(n log n).

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© 2006 Springer-Verlag Berlin Heidelberg

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Bernholt, T., Hofmeister, T. (2006). An Algorithm for a Generalized Maximum Subsequence Problem. In: Correa, J.R., Hevia, A., Kiwi, M. (eds) LATIN 2006: Theoretical Informatics. LATIN 2006. Lecture Notes in Computer Science, vol 3887. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11682462_20

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  • DOI: https://doi.org/10.1007/11682462_20

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-32755-4

  • Online ISBN: 978-3-540-32756-1

  • eBook Packages: Computer ScienceComputer Science (R0)

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