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Let’s Agree to Disagree: Learning Highly Debatable Multirater Labelling

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Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 (MICCAI 2019)

Abstract

Classification and differentiation of small pathological objects may greatly vary among human raters due to differences in training, expertise and their consistency over time. In a radiological setting, objects commonly have high within-class appearance variability whilst sharing certain characteristics across different classes, making their distinction even more difficult. As an example, markers of cerebral small vessel disease, such as enlarged perivascular spaces (EPVS) and lacunes, can be very varied in their appearance while exhibiting high inter-class similarity, making this task highly challenging for human raters. In this work, we investigate joint models of individual rater behaviour and multi-rater consensus in a deep learning setting, and apply it to a brain lesion object-detection task. Results show that jointly modelling both individual and consensus estimates leads to significant improvements in performance when compared to directly predicting consensus labels, while also allowing the characterization of human-rater consistency.

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References

  1. Bouguelia, M.R., Nowaczyk, S., Santosh, K.C., Verikas, A.: Agreeing to disagree: active learning with noisy labels without crowdsourcing. Int. J. Mach. Learn. Cybern. 9(8), 1307–1319 (2018)

    Article  Google Scholar 

  2. Wang, H., Suh, J.W., Das, S.R., Pluta, J.B., Craige, C., Yushkevich, P.A.: Multi-atlas segmentation with joint label fusion. IEEE TPAMI 35(3), 611–623 (2013). https://doi.org/10.1109/TPAMI.2012.143

  3. Jiang, L., Zhou, Z., Leung, T., Li, L.J., Fei-Fei, L.: MentorNet: Learning Data-Driven Curriculum for Very Deep Neural Networks on Corrupted Labels, December 2017. http://arxiv.org/abs/1712.05055

  4. Li, Y., Yang, J., Song, Y., Cao, L., Luo, J., Li, L.J.: Learning From Noisy Labels With Distillation (2017)

    Google Scholar 

  5. Ramirez, J., Berezuk, C., McNeely, A.A., Gao, F., McLaurin, J., Black, S.E.: Imaging the perivascular space as a potential biomarker of neurovascular and neurodegenerative diseases. Cell. Mol. Neurobiol. 36(2), 289–299 (2016)

    Article  Google Scholar 

  6. Sudre, C., et al.: 3D multirater RCNN for multimodal multiclass detection and characterization of extremely small objects. In: Proceedings of the 2nd International MIDL Conference on Proceedings of Machine Learning Research, vol. 102, pp. 447–456. PMLR, London, United Kingdom, 08–10 Jul 2019

    Google Scholar 

  7. Tanno, R., Saeedi, A., Sankaranarayanan, S., Alexander, D.C., Silberman, N.: Learning from noisy labels by regularized estimation of annotator confusion. In: Conference on Computer Vision and Pattern Recognition (2019)

    Google Scholar 

  8. Tillin, T., Forouhi, N.G., McKeigue, P.M., Chatuverdi, N.F.T.S., Chaturvedi, N.: Southall and Brent REvisited: cohort profile of SABRE, a UK population-based comparison of cardiovascular disease and diabetes in people of European, Indian Asian and African Caribbean origins. Int. J. Epidemiol. 41(1), 33–42 (2012). https://doi.org/10.1093/ije/dyq175

  9. Wardlaw, J.M., et al.: Neuroimaging standards for research into small vessel disease and its contribution to ageing and neurodegeneration. Lancet Neurol. 12, 822–838 (2013)

    Article  Google Scholar 

  10. Warfield, S.K., Zou, K.H., Wells, W.M.: Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation. IEEE TMI 23(7), 903–921 (2004)

    Google Scholar 

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Acknowledgments

We are extremely grateful to all the participants of the SABRE study, and past and present members of the SABRE team. This work was supported by an Alzheimer’s Society Junior Fellowship (AS-JF-17-011), the Wellcome/EPSRC Centre for Medical Engineering [WT 203148/Z/16/Z], IMI2 grant AMYPAD [115952], the MSCA-ITN-Demo [721820], and the Wellcome Flagship Programme in High-Dimensional Neurology. The SABRE study was funded at baseline by the Medical Research Council, Diabetes UK, and the British Heart Foundation. At follow-up, the study was funded by the Wellcome Trust (067100, 37055891 and 086676/7/08/Z), the British Heart Foundation (PG/06/145, PG/08/103/26133, PG/12/29/29497 and CS/13/1/30327) and Diabetes UK (13/0004774). We gratefully acknowledge NVIDIA corporation for the donation of a GPU Tesla K40 that was used in the preparation of this work.

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Correspondence to Carole H. Sudre .

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Sudre, C.H. et al. (2019). Let’s Agree to Disagree: Learning Highly Debatable Multirater Labelling. In: Shen, D., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2019. MICCAI 2019. Lecture Notes in Computer Science(), vol 11767. Springer, Cham. https://doi.org/10.1007/978-3-030-32251-9_73

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  • DOI: https://doi.org/10.1007/978-3-030-32251-9_73

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