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CORSID Enables de novo Identification of Transcription Regulatory Sequences and Genes in Coronaviruses

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Research in Computational Molecular Biology (RECOMB 2022)

Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 13278))

  • 2021 Accesses

Abstract

Coronaviruses are comprised of a single-stranded RNA genome that is ready to be translated by the host ribosome.

C. Zhang and P. Sashittal—Joint first authorship.

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References

  1. Bailey, T.L., et al.: MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res. 37(Suppl._2), W202–W208 (2009)

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  3. Sola, I., Moreno, J.L., Zúñiga, S., Alonso, S., Enjuanes, L.: Role of nucleotides immediately flanking the transcription-regulating sequence core in coronavirus subgenomic mRNA synthesis. J. Virol. 79(4), 2506–2516 (2005)

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Author information

Authors and Affiliations

  1. Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA

    Chuanyi Zhang

  2. Department of Computer Science, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA

    Palash Sashittal & Mohammed El-Kebir

Authors
  1. Chuanyi Zhang
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  2. Palash Sashittal
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  3. Mohammed El-Kebir
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Corresponding author

Correspondence to Mohammed El-Kebir .

Editor information

Editors and Affiliations

  1. Columbia University, New York, NY, USA

    Itsik Pe'er

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© 2022 The Author(s), under exclusive license to Springer Nature Switzerland AG

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Zhang, C., Sashittal, P., El-Kebir, M. (2022). CORSID Enables de novo Identification of Transcription Regulatory Sequences and Genes in Coronaviruses. In: Pe'er, I. (eds) Research in Computational Molecular Biology. RECOMB 2022. Lecture Notes in Computer Science(), vol 13278. Springer, Cham. https://doi.org/10.1007/978-3-031-04749-7_28

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  • DOI: https://doi.org/10.1007/978-3-031-04749-7_28

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-031-04748-0

  • Online ISBN: 978-3-031-04749-7

  • eBook Packages: Computer ScienceComputer Science (R0)

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