Abstract
Diffusion compartment imaging (DCI) characterizes tissues in vivo by separately modeling the diffusion signal arising from a finite number of large scale microstructural environments in each voxel, also referred to as compartments. The DIAMOND model has recently been proposed to characterize the 3-D diffusivity of each compartment using a statistical distribution of diffusion tensors. It enabled the evaluation of compartment-specific diffusion characteristics while also accounting for the intra-compartment heterogeneity. In its original formulation, however, DIAMOND could only describe symmetric heterogeneity, while tissue heterogeneity likely differs along and perpendicular to the orientation of the fascicles. In this work we propose a new statistical distribution model able to decouple axial and radial heterogeneity of each compartment in each voxel. We derive the corresponding analytical expression of the diffusion attenuated signal and evaluate this new approach with both numerical simulations and in vivo data. We show that the heterogeneity arising from white matter fascicles is anisotropic and that the shape of the distribution is sensitive to changes in axonal dispersion and axonal radius heterogeneity. We demonstrate that decoupling the modeling of axial and radial heterogeneity has a substantial impact of the estimated heterogeneity, enables improved estimation of other model parameters and enables improved signal prediction. Our distribution model characterizes not only the orientation of each white matter fascicle but also their diffusivities; it may enable unprecedented characterization of the brain development and of brain disease and injury.
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References
Assaf, Y., Basser, P.J.: Composite hindered and restricted model of diffusion (CHARMED) MR imaging of the human brain. Neuroimage 27(1), 48–58 (2005)
Basser, P.J., Mattiello, J., LeBihan, D.: Estimation of the effective self-diffusion tensor from the NMR spin echo. J. Magn. Reson. B. 103(3), 247–254 (1994)
Efron, B.: Estimating the error rate of a prediction rule: improvement on cross-validation. J. Am. Stat. Assoc. 78(382), 316–331 (1983)
Gupta, A.K., Nagar, D.K.: Matrix Variate Distributions. Chapman & Hall/CRC, Boca Raton (2000)
Hall, M.G., Alexander, D.C.: Convergence and parameter choice for Monte-Carlo simulations of diffusion MRI. IEEE Trans. Med. Imaging 28(9), 1354–1364 (2009)
Jian, B., Vemuri, B.C., Ozarslan, E., Carney, P.R., Mareci, T.H.: A novel tensor distribution model for the diffusion-weighted MR signal. Neuroimage 37(1), 164–176 (2007)
Leow, A.D., Zhu, S., Zhan, L., McMahon, K., de Zubicaray, G.I., Meredith, M., Wright, M.J., Toga, A.W., Thompson, P.M.: The tensor distribution function. Magn. Reson. Med. 61(1), 205–214 (2009)
Mollink, K., Kleinnijenhuis, M., Sotiropoulos, S.N., Cottaar, M., et al.: Exploring fibre orientation dispersion in the corpus callosum: comparison of diffusion MRI, polarized light imaging and histology. In: Proceedings of the 24th ISMRM (2016)
Muirhead, R.J.: Aspects of Multivariate Statistical Theory. Wiley, Hoboken (1982)
Panagiotaki, E., Schneider, T., Siow, B., Hall, M.G., Lythgoe, M.F., Alexander, D.C.: Compartment models of the diffusion MR signal in brain white matter: a taxonomy and comparison. Neuroimage 59(3), 2241–2254 (2012)
Powell, M.J.D.: The BOBYQA algorithm for bound constrained optimization without derivatives. Technical report NA2009/06. Department of Applied Mathematics and Theoretical Physics, Cambridge, England (2009)
Scherrer, B., Schwartzman, A., Taquet, M., Sahin, M., Prabhu, S.P., Warfield, S.K.: Characterizing brain tissue by assessment of the distribution of anisotropic microstructural environments in diffusion-compartment imaging (DIAMOND). Magn. Reson. Med. 76(3), 963–977 (2016)
Scherrer, B., Taquet, M., Warfield, S.K.: Reliable selection of the number of fascicles in diffusion images by estimation of the generalization error. In: Gee, J.C., Joshi, S., Pohl, K.M., Wells, W.M., Zöllei, L. (eds.) IPMI 2013. LNCS, vol. 7917, pp. 742–753. Springer, Heidelberg (2013). doi:10.1007/978-3-642-38868-2_62
Yablonskiy, D.A., Bretthorst, G.L., Ackerman, J.J.: Statistical model for diffusion attenuated MR signal. Magn. Reson. Med. 50(4), 664–669 (2003)
Zhang, H., Schneider, T., Wheeler-Kingshott, C.A., Alexander, D.C.: NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain. Neuroimage 61(4), 1000–1016 (2012)
Acknowledgements
This work was supported by BCH TRP Innovator Award, Fondation Helaers (MT), Foulkes Foundation (MT), FRS-FNRS (GR) and by NIH grants R01 NS079788, R01 EB018988, U01 NS082320.
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Scherrer, B. et al. (2017). Decoupling Axial and Radial Tissue Heterogeneity in Diffusion Compartment Imaging. In: Niethammer, M., et al. Information Processing in Medical Imaging. IPMI 2017. Lecture Notes in Computer Science(), vol 10265. Springer, Cham. https://doi.org/10.1007/978-3-319-59050-9_35
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DOI: https://doi.org/10.1007/978-3-319-59050-9_35
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