Abstract
X-Ray scattering techniques pose some problems for automatic peaks detection on diffraction profiles that can be interesting from a computational point of view. In this way, finding out the measure in which a model fits to an a priori known profile is an optimization problem needing the definition of a figure of merit, whose calculation involves a hard computing effort. A sequential algorithm exploring all the existing possibilities in the solution space of this problem surely would be discarded due to its cost in terms of execution time. Running this algorithm on a grid computing infrastructure helps to reduce a lot this effort and allows to show real results and to offer conclusions about the application of this recent distributed computing paradigm to scientific matters.
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Cowley, J.M.: Diffraction Physics. North Holland, Amsterdam (1975)
Gomez-Pulido, J.A., Sanchez-Bajo, F., Pereira dos Santos, S., Vega-Rodriguez, M.A., Sanchez-Perez, J.M.: Custom Hardware Processor to Compute a Figure of Merit for the Fit of X-Ray Diffraction Peaks, X-Ray Optics and Instrumentation, vol. 2008
Petrick Casagrande, S., Castillo Blanco, R.: Método de Rietveld para el estudio de estructuras cristalinas. Revista de la Facultad de Ciencias, Universidad Nacional de Ingenierïa (Lima-Perú) 9(1) (2005)
Thompson, P., Cox, D.E., Hastings, J.B.: Rietveld refinement of Debye-Scherrer synchrotron X-ray data from Al 2 O 3. Journal of Applied Crystallography 20, part 2, 79–83 (1987)
Dongarra, J., Foster, I., Fox, G., Gropp, W., Kennedy, K., Torczon, L., White, A.: The sourcebook of Parallel Computing. Morgan Kauffmann Publishers, San Francisco (2002)
Berman, F., Fox, G., Hey, T.: Grid Computing: Making the Global Infrastructure a Reality. Wiley, Chichester (2003)
Rogers, S.: A comparison of implicit schemes for the incompressible Navier-Stokes equations with artifitial compressibility. AIAA Journal 33(10), 2066–2072 (1995)
Altschul, S., Dish, W., Miller, W., Meyers, E., Lipman, D.: Basic local alygnment search tool. Journal of molecular Biology 215, 403–410 (1990)
Foster, I., Kesselman, C.: The GRID 2: Blueprint for a New Computing Infrastructure, 2nd edn. Elsevier, Amsterdam (2003)
Buyya, R., Giddy, J., Abramson, D.: An evaluation of economy-based resource trading and scheduling on computational power Grids for parameter sweep applications. In: The Second Workshop on Active Middleware Services (AMS 2000), In Conjunction with HPDC 2001, Kluwer Academic Press, Pittsburgh (2000)
gLite (June 2008), http://www.glite.org
EGEE (Enabling Grids for E-sciencE) (June 2008), http://public.eu-egee.org
Llorente, I.M., Montero, R.S., Huedo, E., Vázquez, T., Vázquez-Poletti, J.L.: GridWay: A metascheduler for Globus-based Grids. In: 2nd Annual TeraGrid Conference (TeraGrid 2007) (June 2007)
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Morales-Ramos, E., Vega-Rodríguez, M.A., Gómez-Iglesias, A., Cárdenas-Montes, M., Gómez-Pulido, J.A., Sánchez-Bajo, F. (2008). Peaks Detection in X-Ray Diffraction Profiles Using Grid Computing. In: Meersman, R., Tari, Z. (eds) On the Move to Meaningful Internet Systems: OTM 2008. OTM 2008. Lecture Notes in Computer Science, vol 5331. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-88871-0_55
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DOI: https://doi.org/10.1007/978-3-540-88871-0_55
Publisher Name: Springer, Berlin, Heidelberg
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