Abstract
A quantitative trait locus (QTL) was identified by linkage analysis on bovine Chromosome 19 that affects the fatty acid, myristic acid (C14:0), in subcutaneous adipose tissue of pasture-fed beef cattle (99% level: experiment-wise significance). The QTL was also shown to have significant effects on ten fatty acids in the milk fat of pasture-fed dairy cattle. A positional candidate gene for this QTL was identified as fatty acid synthase (FASN), which is a multifunctional enzyme with a central role in the metabolism of lipids. Five single nucleotide polymorphisms (SNPs) were identified in the bovine FASN gene, and animals were genotyped for FASN SNPs in three different cattle resource populations. Linkage and association mapping results using these SNPs were consistent with FASN being the gene underlying the QTL. SNP substitution effects for C14:0 percentage were found to have an effect in the opposite direction in adipose fat to that in milk fat. It is concluded that SNPs in the bovine FASN gene are associated with variation in the fatty acid composition of adipose fat and milk fat.
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Baumgard LH, Kay JK, Moore CE, Roche JR, Vanbaale MJ, et al. (2005) Regulating milk fat synthesis: potential on-farm applications of basic science. Proc NZ Soc Anim Prod 65, 33–39
Berner LA (1993) Defining the role of milkfat in balanced diets. Adv Food Nutr Res 37, 131-257
Clop A, Ovilo C, Perez-Enciso M, Cercos A, Tomas A, et al. (2003) Detection of QTL affecting fatty acid composition in the pig. Mamm Genome 14, 650-656
Davies HM (1996) Engineering new oilseed crops from rapeseed. In Progress in new crops. Proceedings of the Third National Symposium, Indianapolis, IN, 22–25 October 1996, Janick J, (ed). (Alexandria, VA: American Society for Horticultural Science Press), pp 299–306
Gaynor PJ, Waldo DR, Capuco AV, Erdman RA, Douglass LW, et al. (1995) Milk fat depression, the glucogenic theory, and trans-18:1 fatty acids. J Dairy Sci 78, 2008–2015
Goddard ME, Hayes B, McPartlan H, Chamberlain AJ (2006) Can the same genetic markers be used in multiple breeds? In Proceedings of the 8th World Congress on Genetics Applied to Livestock Production. Belo Horizonte, Brazil, August 2006 (CD-ROM summary)
Hansen H, Knudsen J (1987) Effect of exogenous long-chain fatty acids on individual fatty acid synthesis by dispersed ruminant mammary gland cells. J Dairy Sci 70, 1350–1354
Ihara N, Takasuga A, Mizoshita K, Takeda H, Sugimoto M, et al. (2004) A comprehensive genetic map of the cattle genome based on 3802 microsatellites. Genome Res 14, 1987-1998
Kappes SM, Keele JW, Stone RT, McGraw RA, Sonstegard TS, et al. (1997) A second-generation linkage map of the bovine genome. Genome Res 7, 235-249
Karamichou E, Richardson RI, Nute GR, Bishop SC (2006) Identification of quantitative trait loci affecting fatty acid composition in sheep. In Proceedings of the 8th World Congress on Genetics Applied to Livestock Production. Belo Horizonte, Brazil, August 2006, Conference Paper No. 13–12
Lee C, Chung Y, Kim J-H (2003) Quantitative trait loci mapping for fatty acid contents in the backfat on porcine chromosomes 1, 13, and 18. Molecules Cells 15, 62-67
Montgomery GW, Sise JA (1990) Extraction of DNA from sheep white blood cells. NZ J Agric Res 33, 437-441
Mozaffarian D, Ascherio A, Hu FB, Stampfer MJ, Willett WC, et al. (2005) Interplay between different polyunsaturated fatty acids and risk of coronary heart disease in men. Circulation 111, 157-164
Perez-Enciso M, Clop A, Noguera JL, Ovilo C, Coll A, et al. (2000) A QTL on pig chromosome 4 affects fatty acid metabolism: evidence from an Iberian by Landrace intercross. J Anim Sci 78, 2525-2531
Roy R, Gautier M, Hayes H, Laurent P, Osta R, et al. (2001) Assignment of the fatty acid synthase (FASN) gene to bovine chromosome 19 (19q22) by in situ hybridization and confirmation by somatic cell hybrid mapping. Cytogenet Cell Genet 93, 141-142
Roy R, Zaragoza P, Rodellar C, Gautier M, Eggen A (2005) Radiation hybrid and genetic linkage mapping of two genes related to fat metabolism in cattle: fatty acid synthase (FASN) and glycerol-3-phosphate acyltransferase mitochondrial (GPAM). Anim Biotechnol 16(1), 1-9
Roy R, Ordovas L, Zaragoza P, Romero A, Moreno C, et al. (2006) Association of polymorphisms in the bovine FASN gene with milk-fat content. Anim Genet 37, 215-218
SAS (1995) JMP v3 (Cary, NC: SAS Institute Inc.)
Seaton G, Haley CS, Knott SA, Kearsey M, Visscher PM (2002) QTL Express: mapping quantitative trait loci in simple and complex pedigrees. Bioinformatics 18, 339-340
Singh SP, Zhou XR, Liu Q, Stymne S, Green AG (2005) Metabolic engineering of new fatty acids in plants. Curr Opin Plant Biol 8, 197-203
Smith S (1994) The animal fatty acid synthase: one gene, one polypeptide, seven enzymes. FASEB J 8, 1248-1259
Spelman R, Coppieters W (2006) Linkage disequilibrium in the New Zealand Jersey population. In Proceedings of the 8th World Congress on Genetics Applied to Livestock Production. Belo Horizonte, Brazil, August 2006 (CD-ROM summary)
Taylor JF, Coutinho LL, Herring KL, Gallagher DS JR, Brenneman RA, et al. (1998) Candidate gene analysis of GH1 for effects on growth and carcass composition of cattle. Anim Genet 29, 194-201
Temme EH, Mensink RP, Hornstra G (1997) Effects of medium chain fatty acids (MCFA), myristic acid, and oleic acid on serum lipoproteins in healthy subjects. J Lipid Res 38, 1746-1754
Acknowledgments
The authors thank the Farm Managers and their staff at AgResearch’s Tokanui Station (Trial 1) and Flock House Station (Trial 3) for care of the animals and for their assistance with data and sample collection. They thank AgResearch’s staff at the Dairy Science and MIRINZ Centres at Ruakura for carrying out the fatty acid composition analyses, and also thank Dr. Paul Shorten for advice during manuscript preparation. This work was funded by the New Zealand Foundation for Research, Science & Technology.
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Morris, C.A., Cullen, N.G., Glass, B.C. et al. Fatty acid synthase effects on bovine adipose fat and milk fat. Mamm Genome 18, 64–74 (2007). https://doi.org/10.1007/s00335-006-0102-y
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DOI: https://doi.org/10.1007/s00335-006-0102-y