Published October 20, 2021
| Version 1.7.0
Software
Open
nipy/nipype: 1.7.0
Creators
-
Esteban, Oscar1
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Markiewicz, Christopher J.2
- Burns, Christopher
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Goncalves, Mathias3
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Jarecka, Dorota3
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Ziegler, Erik4
- Berleant, Shoshana
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Ellis, David Gage5
- Pinsard, Basile
- Madison, Cindee
- Waskom, Michael1
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Notter, Michael Philipp6
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Clark, Daniel7
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Manhães-Savio, Alexandre8
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Clark, Dav9
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Jordan, Kesshi10
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Dayan, Michael11
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Halchenko, Yaroslav O.12
- Loney, Fred
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Salo, Taylor13
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Dewey, Blake E14
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Johnson, Hans15
- Bougacha, Salma16
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Keshavan, Anisha17
- Yvernault, Benjamin
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Hamalainen, Carlo
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Christian, Horea18
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Ćirić , Rastko2
- Dubois, Mathieu
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Joseph, Michael19
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Cipollini, Ben20
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Tilley II, Steven21
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Visconti di Oleggio Castello, Matteo22
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De La Vega, Alejandro23
- Wong, Jason24
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Kaczmarzyk, Jakub3
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Huntenburg, Julia M.25
- Clark, Michael G.26
- Benderoff, Erin27
- Erickson, Drew
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Kent, James D.28
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Hanke, Michael29
- Giavasis, Steven30
- Moloney, Brendan
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Nichols, B. Nolan31
- Tungaraza, Rosalia
- Frohlich, Caroline30
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Wassermann, Demian32
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de Hollander, Gilles33
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Dell'Orco, Andrea34
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Eshaghi, Arman35
- Millman, Jarrod
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Mancini, Matteo35
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Close, Thomas36
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Nielson, Dylan M.37
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Varoquaux, Gael38
- Watanabe, Aimi
- Mordom, David
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Waller, Lea39
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Machado, Fátima40
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Guillon, Jérémy41
- Koudoro, Serge42
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Robert-Fitzgerald, Timothy43
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Chetverikov, Andrey44
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Rokem, Ariel45
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Acland, Benjamin46
- Forbes, Jessica
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Markello, Ross47
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Gillman, Ashley48
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Kong, Xiang-Zhen49
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Geisler, Daniel50
- Salvatore, John
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Gramfort, Alexandre51
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Doll, Anna52
- Buchanan, Colin
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DuPre, Elizabeth47
- Liu, Siqi53
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Schaefer, Alexander54
- Kleesiek, Jens55
- Sikka, Sharad56
- Schwartz, Yannick
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Ghayoor, Ali5
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Lee, John A.57
- Mattfeld, Aaron
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Richie-Halford, Adam58
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Liem, Franz59
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Perez-Guevara, Martin Felipe60
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Heinsfeld, Anibal Sólon
- Haselgrove, Christian
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Durnez, Joke61
- Lampe, Leonie62
- Poldrack, Russell
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Glatard, Tristan63
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Tabas, Alejandro64
- Cumba, Chad
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Pérez-García, Fernando35
- Blair, Ross
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Iqbal, Shariq65
- Baratz, Zvi66
- Welch, David15
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Contier, Oliver67
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Triplett, William1
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Craddock, R. Cameron30
- Correa, Carlos
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Papadopoulos Orfanos, Dimitri68
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Stadler, Jörg69
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Warner, Joshua70
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Sisk, Lucinda M.71
- Falkiewicz, Marcel
- Sharp, Paul72
- Rothmei, Simon
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Kim, Sin73
- Weinstein, Alejandro
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Kahn, Ari E.74
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Kastman, Erik75
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Bottenhorn, Katherine13
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Grignard, Martin76
- Perkins, L. Nathan77
- Zhou, Dale
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Bielievtsov, Dmytro
- Ben-Zvi, Gal66
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Cooper, Gavin78
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Stojic, Hrvoje79
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Linkersdörfer, Janosch80
- Renfro, Mandy
- Hinds, Oliver
- Stanley, Olivia81
- Küttner, René
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Pauli, Wolfgang M.82
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Glen, Daniel83
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Kimbler, Adam13
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Meyers, Benjamin84
- Tarbert, Claire
- Ginsburg, Daniel
- Haehn, Daniel
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Margulies, Daniel S.85
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Condamine, Eric86
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Ma, Feilong22
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Malone, Ian B.35
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Snoek, Lukas87
- Brett, Matthew
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Cieslak, Matthew88
- Hallquist, Michael
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Molina-Romero, Miguel89
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Bilgel, Murat90
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Lee, Nat
- Jalan, Raunak
- Inati, Souheil
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Gerhard, Stephan91
- Mathotaarachchi, Sulantha92
- Saase, Victor
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Van, Andrew46
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Steele, Christopher John93
- Ort, Eduard94
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Lerma-Usabiaga, Garikoitz2
- Schwabacher, Isaac
- Arias, Jaime
- Lai, Jeff
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Pellman, John95
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Huguet, Jordi96
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Junhao WEN74
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Leinweber, Katrin97
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Chawla, Kshitij98
- Weninger, Leon99
- Modat, Marc
- Harms, Robbert
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Andberg, Sami Kristian100
- Matsubara, K
- González Orozco, Abel A.101
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Routier, Alexandre102
- Marina, Ana
- Davison, Andrew
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Floren, Andrew103
- Park, Anne
- Cheung, Brian
- McDermottroe, Conor
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McNamee, Daniel104
- Shachnev, Dmitry
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Vogel, Dorian105
- Flandin, Guillaume
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Jones, Henry106
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Gonzalez, Ivan107
- Varada, Jan
- Schlamp, Kai
- Podranski, Kornelius
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Huang, Lijie108
- Noel, Maxime
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Pannetier, Nicolas109
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Numssen, Ole67
- Khanuja, Ranjeet
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Mukhometzianov, Rinat110
- Urchs, Sebastian
- Nickson, Thomas
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Huang, Lijie108
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Broderick, William65
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Xie, Xihe111
- Tambini, Arielle
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Mihai, Paul Glad64
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Gorgolewski, Krzysztof J.1
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Ghosh, Satrajit112
- 1. Department of Psychology, Stanford University
- 2. Stanford University
- 3. MIT
- 4. Independent
- 5. The University of Iowa
- 6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
- 7. Developer
- 8. Klinikum rechts der Isar, TUM. ACPySS
- 9. UC Berkeley
- 10. University of California, San Francisco
- 11. Mayo Clinic, Neurology, Rochester, MN, USA
- 12. Dartmouth College: Hanover, NH, United States
- 13. Florida International University
- 14. Department of Electrical and Computer Engineering, Johns Hopkins University
- 15. University of Iowa
- 16. Molecular Imaging Research Center, CEA, France
- 17. UC Berkeley - UCSF Graduate Program in Bioengineering
- 18. Institute for Biomedical Engineering, ETH and University of Zurich
- 19. The Centre for Addiction and Mental Health
- 20. UC San Diego
- 21. Holland Bloorview Kids Rehabilitation Hospital
- 22. Dartmouth College
- 23. University of Texas at Austin
- 24. Shattuck Lab, UCLA Brain Mapping Center
- 25. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 26. National Institutes of Health
- 27. Concordia University
- 28. Neuroscience Program, University of Iowa
- 29. Otto-von-Guericke-University Magdeburg, Germany
- 30. Child Mind Institute
- 31. SRI International
- 32. Athena EPI, Inria Sophia-Antipolis
- 33. Vrije Universiteit, Amsterdam
- 34. Charitè Universitätsmedizin Berlin, Germany
- 35. University College London
- 36. University of Sydney
- 37. National Institute of Mental Health
- 38. INRIA
- 39. Charite Universitatsmedizin Berlin, Germany
- 40. CIBIT, UC
- 41. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
- 42. Indiana University, IN, USA
- 43. Penn Statistics in Imaging and Visualization Endeavor, University of Pennsylvania
- 44. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
- 45. The University of Washington eScience Institute
- 46. Washington University in St Louis
- 47. Montreal Neurological Institute and Hospital
- 48. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
- 49. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
- 50. Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany
- 51. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
- 52. Department of Psychology, University of Bielefeld, Bielefeld, Germany.
- 53. The University of Sydney
- 54. National University Singapore
- 55. UniversityHospital Heidelberg, Germany
- 56. Nathan s Kline institute for psychiatric research
- 57. NIMH IRP
- 58. University of Washington
- 59. University of Zurich
- 60. Neurospin/Unicog/Inserm/CEA
- 61. Department of Psychology, Stanford University; Parietal, INRIA
- 62. MPI CBS Leipzig, Germany
- 63. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
- 64. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
- 65. Duke University
- 66. Sagol School of Neuroscience, Tel Aviv University
- 67. Max Planck Institute for Human Cognitive and Brain Sciences
- 68. CEA
- 69. Leibniz Institute for Neurobiology
- 70. Mayo Clinic
- 71. Yale University; New Haven, CT, United States
- 72. University of Illinois Urbana Champaign
- 73. Korea Advanced Institute of Science and Technology
- 74. University of Pennsylvania
- 75. Harvard University - Psychology
- 76. GIGA Institute
- 77. Boston University
- 78. University of Newcastle, Australia
- 79. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
- 80. German Institute for International Educational Research
- 81. Dept of Medical Biophysics, Univeristy of Western Ontario
- 82. California Institute of Technology
- 83. NIMH, Scientific and Statistical Computing Core
- 84. University of Pittsburgh
- 85. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 86. CNRS, UMS3552 IRMaGe
- 87. University of Amsterdam
- 88. Department of Neuropsychiatry, University of Pennsylvania
- 89. Technical University Munich
- 90. National Institute on Aging, Baltimore, MD, USA
- 91. Institute of Neuroinformatics, ETH/University of Zurich
- 92. Enigma Biomedical Group
- 93. MPI-CBS; McGill University
- 94. Vrije Universiteit Amsterdam
- 95. Child Mind Institute / Nathan Kline Institute
- 96. BarcelonaBeta Brain Research Center
- 97. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
- 98. INRIA-Saclay, Team Parietal
- 99. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
- 100. University of Helsinki
- 101. Universidad de Guadalajara
- 102. ARAMIS Lab
- 103. The University of Texas at Austin
- 104. University of Cambridge
- 105. University of Applied Sciences and Arts Northwestern Switzerland
- 106. Stanford University and the University of Chicago
- 107. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
- 108. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- 109. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
- 110. University of Waterloo
- 111. Weill Cornell Medicine
- 112. MIT, HMS
Description
1.7.0 (October 20, 2021)
New feature release in the 1.7.x series.
- FIX: Make ants.LaplacianThickness output_image a string, not file (https://github.com/nipy/nipype/pull/3393)
- FIX: coord for mrconvert (https://github.com/nipy/nipype/pull/3369)
- FIX:
antsRegistration
allows therestrict_deformation
to be float (https://github.com/nipy/nipype/pull/3387) - FIX: Also allow
errno.EBUSY
duringemptydirs
on NFS (https://github.com/nipy/nipype/pull/3357) - FIX: Removed exists=True from MathsOutput (https://github.com/nipy/nipype/pull/3385)
- FIX: Extension not extensions, after pybids v0.9 (https://github.com/nipy/nipype/pull/3380)
- ENH: Add CAT12 SANLM denoising filter (https://github.com/nipy/nipype/pull/3374)
- ENH: Add expected steps for FreeSurfer 7 recon-all (https://github.com/nipy/nipype/pull/3389)
- ENH: Stop printing false positive differences when logging cached nodes (https://github.com/nipy/nipype/pull/3376)
- ENH: Add new flags to MRtrix/preprocess.py (DWI2Tensor, MRtransform) (https://github.com/nipy/nipype/pull/3365)
- ENH:
verbose
input should not be hashed inants.Registration
(https://github.com/nipy/nipype/pull/3377) - REF: Clean-up the BaseInterface
run()
function using context (https://github.com/nipy/nipype/pull/3347) - DOC: Fix typo in README (https://github.com/nipy/nipype/pull/3386)
- STY: Make private member name consistent with the rest of them (https://github.com/nipy/nipype/pull/3346)
- MNT: Simplify interface execution and better error handling of
Node
(https://github.com/nipy/nipype/pull/3349) - MNT: Add user name and email to Docker to appease git/annex/datalad (https://github.com/nipy/nipype/pull/3378)
- CI: Update CircleCI machine image (https://github.com/nipy/nipype/pull/3391)
Files
nipy/nipype-1.7.0.zip
Files
(3.7 MB)
Name | Size | Download all |
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md5:c1e533b3959b20cc0cef11c94057410f
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Additional details
Related works
- Is supplement to
- https://github.com/nipy/nipype/tree/1.7.0 (URL)