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Commits on Sep 27, 2024

• Added Umami analytics to the docs

  

  Viktor Petukhov

  committed
  86f0204
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Commits on Sep 24, 2024

• Removed the docs from README

  

  Viktor Petukhov

  committed
  7bc689f
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• Updated the docs

  

  Viktor Petukhov

  committed
  9e163c4
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• Prepared docs for Documenter.jl

  

  Viktor Petukhov

  committed
  0fbad4b
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Commits on Sep 13, 2024

• Update CHANGELOG.md

  VPetukhov

  authored
  b0600d2
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• Merge branch 'develop' of github.com:kharchenkolab/Baysor

  VPetukhov

  committed
  332e657
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• Small test fix

  

  Viktor Petukhov

  committed
  4d3fc4e
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• Fixed segmentation convergence plot size

  

  Viktor Petukhov

  committed
  865c797
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• Fixed error message bug

  VPetukhov

  committed
  4257d73
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• Fixed a plotting bug for prior polygons

  VPetukhov

  committed
  ff7a78e
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• Merge branch 'master' of github.com:kharchenkolab/Baysor into develop

  VPetukhov

  committed
  e3d5e2e
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• More informative error messages

  

  Viktor Petukhov

  committed
  01a4e55
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• Merge branch 'master' of github.com:kharchenkolab/Baysor

  VPetukhov

  committed
  c3e0de8
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Commits on Sep 12, 2024

• Fixed examples and CLI docs

  

  Viktor Petukhov

  committed
  a5d102c
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• README and Docker for application build

  

  Viktor Petukhov

  committed
  26a6feb
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• Updated Comonicon and dependencies

  

  Viktor Petukhov

  committed
  ee4f4d9
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Commits on Sep 6, 2024

• Set min markersize to 1 in plot_dataset_colors

  

  Viktor Petukhov

  committed
  12800a7
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• Improved z slicing for polygons

  

  Viktor Petukhov

  committed
  ff54289
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• normalize_df_types! now converts all AbstractStrings to Strings

  

  Viktor Petukhov

  committed
  6d4c2e7
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• Updated changelog and configs

  

  Viktor Petukhov

  committed
  d965776
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• Fixed splitext bug for molecules.csv

  

  Viktor Petukhov

  committed
  aa8e3fd
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• Fixed plot sizes. Limited molecule plot size to 3000 pixels max.

  

  Viktor Petukhov

  committed
  9a19694
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• Fixed Symbol in configs, fixed RI name in defaults

  

  Viktor Petukhov

  committed
  1012273
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• Allowing string labels for prior segmentation

  

  Viktor Petukhov

  committed
  b2a05a1
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Commits on Sep 5, 2024

• Fixed boundary_polygons tests

  

  Viktor Petukhov

  committed
  6e0bcdc
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• Removed obsolete Dirichlet options

  

  Viktor Petukhov

  committed
  30ae1a7
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• Fixed example configs, added Xenium

  

  Viktor Petukhov

  committed
  83f2754
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• log-transform counts for NCVs; renamed :hash to :ri

  

  Viktor Petukhov

  committed
  7e3f68f
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• Fixed CLI docs

  

  Viktor Petukhov

  committed
  ed509ab
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Commits on Sep 4, 2024

• 2d and 3d polygons are now stored separately

  

  Viktor Petukhov

  committed
  b43ca39
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• Tests for polygons

  

  Viktor Petukhov

  committed
  0fccce6
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• Bin z-stack if many slices are provided

  

  Viktor Petukhov

  committed
  9e97d50
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• Using cell names for polygon IDs in CLI

  

  Viktor Petukhov

  committed
  e151039
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• Updated README and CHANGELOG

  

  Viktor Petukhov

  committed
  1fa3620
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• Save polygons as FeatureCollection by default. Replaced save-polygons with polygon-format.

  

  Viktor Petukhov

  committed
  a626253
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