Jul 1, 2008 · A backrub shifts the Cα–Cβ orientation of a given side-chain by rigid-body dipeptide rotation plus smaller individual rotations of the two ...
A backrub shifts the C(alpha)-C(beta) orientation of a given side-chain by rigid-body dipeptide rotation plus smaller individual rotations of the two peptides, ...
Jul 1, 2008 · A backrub shifts the C(alpha)-C(beta) orientation of a given side-chain by rigid-body dipeptide rotation plus smaller individual rotations of ...
A combinatorial search algorithm for protein design that incorporates an automated procedure for local backbone flexibility via backrub motions and derives ...
Abstract Motivation: The Backrub is a small but kinematically efficient side-chain-coupled local backbone motion frequently observed in atomic-resolution ...
Second, we directly apply a provably-accurate, backrub-enabled protein design algorithm to idealized versions of these motifs, and discover that the lowest- ...
Feb 2, 2006 · The geometry used by the Backrub algorithm is diagrammed in Figure 1A. It acts on a central residue i and the two flanking peptides. For each of ...
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Algorithm for backrub motions in protein design. Motivation: The Backrub is a small but kinematically efficient side-chain-coupled local backbone motion ...
The BACKRUB modeling algorithm, described below, closely satisfies the backrub ... model for protein folding by multiple methionine substitutions within ...
Algorithm for backrub motions in protein design. I. Georgiev, D. Keedy, J. Richardson, D. Richardson, and B. Donald. ISMB, page 196-204. (2008 ). Links and ...