We study this question in the paper. We propose a strategy to classify amino acids, which leads to a better hash seed. Our results raise a new question about ...

Abstract. Spaced seeds have been extensively studied in the homology search field. A spaced seed can be regarded as a very special type of hash function on ...

Dec 21, 2014 · ... This matrix quantifies the likelihood of a substitution event between two amino acids based on observed mutations in protein sequences that ...

Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J.: Basic local alignment search tool. J. Mol. Biol. 215(3), 403–410 (1990)

May 10, 2023 · Here we present aaHash, a hashing algorithm designed for amino acid sequences that uses multi-level seed tables to represent the biochemical ...

Spaced seeds have been extensively studied in the homology search field. A spaced seed can be regarded as a very special type of hash function on.

Here, we present aaHash, a recursive hashing algorithm tailored for amino acid sequences. This algorithm utilizes multiple hash levels to represent biochemical ...

Title, Amino Acid Classification and Hash Seeds for Homology Search. Publication Type, Conference. Date, 2009. Authors, W. Li, B. Ma, K. Zhang.

Amino Acid Classification and Hash Seeds for Homology Search. Conference ... We propose a strategy to classify amino acids, which leads to a better hash seed.

... cO Springer-Verlag Berlin Heidelberg 2009 positions out of k . A spaced seed can be. Amino Acid Classification and Hash Seeds for Homology Search Introduction.