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Comparing bacterial genomes implies the use of a dedicated measure. It relies on comparing circular genomes based on a set of conserved genes.
Comparing bacterial genomes implies the use of a dedicated measure. It relies on comparing circular genomes based on a set of conserved genes.
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Abstract. Comparing bacterial genomes implies the use of a dedicated measure. It relies on comparing circular genomes based on a set of con- served genes.
An approach to compute the common intervals between two circular genomes that takes into account duplications is proposed and indeed emphasizes sets of ...
Bibliographic details on Comparing Bacterial Genomes by Searching Their Common Intervals.
Abstract—We consider the problem of inferring approx- imate common intervals of multiple genomes. Genomes are modelled as sequences of homologous genes ...
Missing: Searching | Show results with:Searching
Jun 30, 2023 · We have developed a de novo method for the identification of dispersed repeats based on the use of random position-weight matrices (PWMs) ...
Abstract: We consider the problem of inferring approximate common intervals of multiple genomes. Genomes are modelled as sequences of homologous genes ...
Apr 10, 2013 · In most bacterial genome sequencing experiments, whole genomic DNA is extracted from the isolate and thus the sequence data includes both ...
Missing: Intervals. | Show results with:Intervals.
In this chapter we present several tools for comparison of sequenced pathogenic genomes, and discuss differences between pathogens and non-pathogens. The ...