This problem has been extensively studied when the position weight matrix (PWM) model is used to represent motifs. We investigate it under the feature motif ...
This problem has been extensively studied when the position weight matrix (PWM) model is used to represent motifs. We investigate it under the feature motif ...
This problem has been extensively studied when the position weight matrix (PWM) model is used to represent motifs. We investigate it under the feature motif ...
Fast Matching of Transcription Factor Motifs Using Generalized ...
www.liebertpub.com › cmb.2012.0289
The problem of finding the locations in DNA sequences that match a given motif describing the binding specificities of a transcription factor (TF) has many ...
Fast Matching of Transcription Factor Motifs Using Generalized Position Weight Matrix Models ; English · Journal of Computational Biology · 20 · 9 · 621-630.
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What are the motifs in transcription factors?
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What is the position weight matrix of the DNA sequence?
Dec 5, 2016 · We develop fast motif matching algorithms for the aforementioned tasks. First, we formalize a framework based on high-order position weight ...
Sep 4, 2014 · Fast matching of transcription factor motifs using generalized position weight matrix models. J. Comput. Biol., 20 (9) (2013), pp. 1-10.
Jun 11, 2013 · The problem has applications in the discovery of transcription factor binding sites in DNA sequences when using generalized versions of the ...
... Fast matching of transcription factor motifs using generalized position weight matrix models. Journal of Computational Biology 20(9), 1–10 (2013). Article ...
Ukkonen, “Fast matching of transcription factor motifs using generalized position weight matrix models,” Journal of Computational Biology, vol. 20, no. 9 ...