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We find that both pretraining schemes lead to improvements in average F1-score for all entity types. Furthermore, we found that the model pretrained with GSPT ...
Jan 1, 2020 · We evaluate different methods for alleviating the data sparsity problem by pretraining a deep neural network (LSTM-CRF), followed by a rather short fine-tuning ...
Motivation: Several recent studies showed that the application of deep neural networks advanced the state-of-the-art in named entity recognition (NER), ...
HunFair, which comes with models for genes, proteins, chemicals, diseases, species and cell lines, is an advanced NER tagger for biomedical texts. Compared with ...
HUNER is a state-of-the-art NER model for biomedical entities. It comes with models for genes/proteins, chemicals, diseases, species and cell lines.
About. The tools on this website are bases on the publication "Pretraining Improves Deep Learning for Biomedical Named Entity Recognition".
We also investigate the effect of pretraining on multiple gold standard corpora, by comparing HunFlair to a non-pretrained version on all 23 NER corpora. On ...
Feb 9, 2021 · In this work, we explore the effectiveness of transfer learning and semi-supervised self-training to improve the performance of NER models in biomedical ...
In this paper, we propose a neural network method that can effectively recognize entities in unstandardized online medical/health text.
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What is biomedical named entity recognition?
Aug 18, 2020 · To address this, we recently released the HUNER tagger (Weber et al., 2019) that was trained on a large collection of biomedical NER datasets, ...