In this paper, we present a novel algorithm of binary particle swarm optimization (BPSO) for MSA solving. The approach is examined by using a set of standard ...

Abstract—Multiple sequence alignment (MSA) is a fundamental and challenging problem in the analysis of biologic sequence. The MSA problem is hard to be ...

In this paper, we present a novel algorithm of binary particle swarm optimization (BPSO) for MSA solving. The approach is examined by using a set of standard ...

Nov 25, 2019 · A novel algorithm for MSA called ProbPFP is presented in this paper. It intergrate optimized HMM by particle swarm with partition function.

Multiple sequence alignment using multi-objective based bacterial foraging optimization algorithm · A Review on Particle Swarm Optimization variants and their ...

However, it is difficult to deal with multiple sequence alignment problem(MSA). In this paper, an improved particle swarm optimization is designed to solve MSA.

The recent advent of bioinformatics has given rise to the central and recurrent problem of optimally aligning biological sequences.

Experiments show that the proposed novel binary particle swarm optimization (NBPSO-MSA) outperforms other 12 state-of-the art aligners in accuracy, ...

In this paper, we propose mutation-based binary particle swarm optimization (M-BPSO) for MSA solving. In the proposed M-BPSO algorithm, BPSO algorithm is ...

This paper presents a Fragmented protein sequence alignment using two-layer PSO (FTLPSO) method to overcome the drawbacks of particle swarm optimization (PSO)