<p>Summary of number of loci common between genetic maps for different mapping populations.... more <p>Summary of number of loci common between genetic maps for different mapping populations.</p
Una población de 117 líneas endogámicas recombinantes (RILs) F6, derivada de la cruza de las vari... more Una población de 117 líneas endogámicas recombinantes (RILs) F6, derivada de la cruza de las variedades Frontana e INIA66, se analizó mediante el uso de marcadores moleculares para construir un mapa genético que servirá de base para determinar los QTL de caracteres que segregan en la población. Un segundo objetivo fue determinar el potencial conjunto de la utilización de dos tipos de marcadores: RFLPs y los microsatélites o secuencias simples repetidas (SSRs), en el análisis genético de una especie de genoma complejo, como el que posee el trigo harinero (Triticum aestivum L. em. Thell.). Los progenitores se analizaron con 822 sondas de RFLPs y 68 pares de iniciadores. Mientras que los RFLPs mostraron un nivel bajo de polimorfismo (29 %), los SSRs tuvieron una mayor capacidad de detección del mismo (40 %). El análisis de las 117 RILs con 158 sondas RFLPs y 27 SSRs permitió la formación de 26 grupos de ligamiento. La especificidad de los SSRs fue un factor importante para la correcta ...
<p>Markers are shown on <i>right</i> side of the LG while map distances are sho... more <p>Markers are shown on <i>right</i> side of the LG while map distances are shown on the <i>left</i> side. Each LG has been divided into 203 BINs of 20 cM each. The homoeologous loci between the corresponding LGs in the reference consensus map are indicated in red colour.</p
<p>The LGs of the reference consensus map are represented as a01 to a10 and b01 to b10. The... more <p>The LGs of the reference consensus map are represented as a01 to a10 and b01 to b10. The LGs of AA map are named as Group 1 to Group 11 and for BB map as B1 to B10 respectively (published by Moretzsohn et al 2005, 2009). The AA map was represented by a red bar and the BB map with green colour. The common markers between corresponding LGs in the reference consensus map and AA map are indicated in red colour and pink colour with BB map.</p
Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establish... more Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome
With the aim of understanding the genetic basis and identification of quantitative trait loci (QT... more With the aim of understanding the genetic basis and identification of quantitative trait loci (QTL) for drought tolerance, two new recombinant inbred line (RIL) mapping populations, namely ICGS 76 × CSMG 84-1 (RIL-2) and ICGS 44 × ICGS 76 (RIL-3), were used. CMap Visualization Links: ICGS76 X CSMG84-1 ICGS44 X ICGS76 TAG24 X ICGV86031 DOI: doi:10.1007/s11032-011-9660-0
A reference consensus genetic map was developed from 10 RILs and one BC population using the mark... more A reference consensus genetic map was developed from 10 RILs and one BC population using the marker segregation data. This map comprised of 897 marker loci including 895 SSR and 2 cleaved amplified polymorphic sequence (CAPS). CMap Visualization Links: Reference consensus genetic map BC-1 RIL-1, RIL-2, RIL-3, RIL-4, RIL-5, RIL-6, RIL-7, RIL-8, RIL-9, RIL-10 combined_corresponding_a01, combined_corresponding_a02, combined_corresponding_a03, combined_corresponding_a04, combined_corresponding_a05, combined_corresponding_a06, combined_corresponding_a07, combined_corresponding_a08, combined_corresponding_a09, combined_corresponding_a10, combined_corresponding_b01, combined_corresponding_b02, combined_corresponding_b03, combined_corresponding_b04, combined_corresponding_b05, combined_corresponding_b06, combined_corresponding_b07, combined_corresponding_b08, combined_corresponding_b09, combined_corresponding_b10 DOI: doi:10.1371/journal.pone.0041213
Suffix Division Organization International Crops Research Institute for the Semi-Arid Tropics (IC... more Suffix Division Organization International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) Address Patancheru-502324, Greater Hyderabad, Andhra Pradesh, India Division Generation Challenge Program (GCP) Organization c/o CIMMYT Address Int APDO Postal 6641, 06600, Mexico, DF, Mexico Division The University of Western Australia Organization School of Plant Biology (M084), Natural and Agricultural Sciences Address 35 Stirling Highway, 6009, Crawley, WA, Australia Email r.k.varshney@cgiar.org
311 SSRs and 71 gene based SNPs were developed from mapping population of C. arietinum ICC 4958 ×... more 311 SSRs and 71 gene based SNPs were developed from mapping population of C. arietinum ICC 4958 × C. reticulatum PI 489777 CMap Visualization Links: ICC 4958 X PI 489777 DOI: doi:10.1007/s00122-010-1265-1
EXECUTIVE SUMMARY Pressures to capitalize upon to skyrocketing fossil fuel prices during the peri... more EXECUTIVE SUMMARY Pressures to capitalize upon to skyrocketing fossil fuel prices during the period 2004-08 caused many agencies and businesses to rush into biofuels development with insufficient scientific knowledge or agronomic experience. They lacked a clear idea of the sustainability and productivity of the technical options they were promoting, and of the social, economic, and environmental consequences of their actions. There continues to be too much heat and too little light in biofuels debates today. The CGIAR can replace heat with light in service of its pro-poor mission by asking "can bioenergy help alleviate hunger and poverty in the developing world, without degrading the environment?" This question implies a range of important scientific hypotheses needing skilled analysis by a holistic team of economists, biologists, and environmental scientists working closely with process engineers, entrepreneurs, governments and farmer groups. Based on its sweet sorghum an...
<p>Summary of number of loci common between genetic maps for different mapping populations.... more <p>Summary of number of loci common between genetic maps for different mapping populations.</p
Una población de 117 líneas endogámicas recombinantes (RILs) F6, derivada de la cruza de las vari... more Una población de 117 líneas endogámicas recombinantes (RILs) F6, derivada de la cruza de las variedades Frontana e INIA66, se analizó mediante el uso de marcadores moleculares para construir un mapa genético que servirá de base para determinar los QTL de caracteres que segregan en la población. Un segundo objetivo fue determinar el potencial conjunto de la utilización de dos tipos de marcadores: RFLPs y los microsatélites o secuencias simples repetidas (SSRs), en el análisis genético de una especie de genoma complejo, como el que posee el trigo harinero (Triticum aestivum L. em. Thell.). Los progenitores se analizaron con 822 sondas de RFLPs y 68 pares de iniciadores. Mientras que los RFLPs mostraron un nivel bajo de polimorfismo (29 %), los SSRs tuvieron una mayor capacidad de detección del mismo (40 %). El análisis de las 117 RILs con 158 sondas RFLPs y 27 SSRs permitió la formación de 26 grupos de ligamiento. La especificidad de los SSRs fue un factor importante para la correcta ...
<p>Markers are shown on <i>right</i> side of the LG while map distances are sho... more <p>Markers are shown on <i>right</i> side of the LG while map distances are shown on the <i>left</i> side. Each LG has been divided into 203 BINs of 20 cM each. The homoeologous loci between the corresponding LGs in the reference consensus map are indicated in red colour.</p
<p>The LGs of the reference consensus map are represented as a01 to a10 and b01 to b10. The... more <p>The LGs of the reference consensus map are represented as a01 to a10 and b01 to b10. The LGs of AA map are named as Group 1 to Group 11 and for BB map as B1 to B10 respectively (published by Moretzsohn et al 2005, 2009). The AA map was represented by a red bar and the BB map with green colour. The common markers between corresponding LGs in the reference consensus map and AA map are indicated in red colour and pink colour with BB map.</p
Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establish... more Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome
With the aim of understanding the genetic basis and identification of quantitative trait loci (QT... more With the aim of understanding the genetic basis and identification of quantitative trait loci (QTL) for drought tolerance, two new recombinant inbred line (RIL) mapping populations, namely ICGS 76 × CSMG 84-1 (RIL-2) and ICGS 44 × ICGS 76 (RIL-3), were used. CMap Visualization Links: ICGS76 X CSMG84-1 ICGS44 X ICGS76 TAG24 X ICGV86031 DOI: doi:10.1007/s11032-011-9660-0
A reference consensus genetic map was developed from 10 RILs and one BC population using the mark... more A reference consensus genetic map was developed from 10 RILs and one BC population using the marker segregation data. This map comprised of 897 marker loci including 895 SSR and 2 cleaved amplified polymorphic sequence (CAPS). CMap Visualization Links: Reference consensus genetic map BC-1 RIL-1, RIL-2, RIL-3, RIL-4, RIL-5, RIL-6, RIL-7, RIL-8, RIL-9, RIL-10 combined_corresponding_a01, combined_corresponding_a02, combined_corresponding_a03, combined_corresponding_a04, combined_corresponding_a05, combined_corresponding_a06, combined_corresponding_a07, combined_corresponding_a08, combined_corresponding_a09, combined_corresponding_a10, combined_corresponding_b01, combined_corresponding_b02, combined_corresponding_b03, combined_corresponding_b04, combined_corresponding_b05, combined_corresponding_b06, combined_corresponding_b07, combined_corresponding_b08, combined_corresponding_b09, combined_corresponding_b10 DOI: doi:10.1371/journal.pone.0041213
Suffix Division Organization International Crops Research Institute for the Semi-Arid Tropics (IC... more Suffix Division Organization International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) Address Patancheru-502324, Greater Hyderabad, Andhra Pradesh, India Division Generation Challenge Program (GCP) Organization c/o CIMMYT Address Int APDO Postal 6641, 06600, Mexico, DF, Mexico Division The University of Western Australia Organization School of Plant Biology (M084), Natural and Agricultural Sciences Address 35 Stirling Highway, 6009, Crawley, WA, Australia Email r.k.varshney@cgiar.org
311 SSRs and 71 gene based SNPs were developed from mapping population of C. arietinum ICC 4958 ×... more 311 SSRs and 71 gene based SNPs were developed from mapping population of C. arietinum ICC 4958 × C. reticulatum PI 489777 CMap Visualization Links: ICC 4958 X PI 489777 DOI: doi:10.1007/s00122-010-1265-1
EXECUTIVE SUMMARY Pressures to capitalize upon to skyrocketing fossil fuel prices during the peri... more EXECUTIVE SUMMARY Pressures to capitalize upon to skyrocketing fossil fuel prices during the period 2004-08 caused many agencies and businesses to rush into biofuels development with insufficient scientific knowledge or agronomic experience. They lacked a clear idea of the sustainability and productivity of the technical options they were promoting, and of the social, economic, and environmental consequences of their actions. There continues to be too much heat and too little light in biofuels debates today. The CGIAR can replace heat with light in service of its pro-poor mission by asking "can bioenergy help alleviate hunger and poverty in the developing world, without degrading the environment?" This question implies a range of important scientific hypotheses needing skilled analysis by a holistic team of economists, biologists, and environmental scientists working closely with process engineers, entrepreneurs, governments and farmer groups. Based on its sweet sorghum an...
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