Data sharing is one of the cornerstones of modern science that enables large-scale analyses and r... more Data sharing is one of the cornerstones of modern science that enables large-scale analyses and reproducibility. We evaluated data availability in research articles across nine disciplines in Nature and Science magazines and recorded corresponding authors’ concerns, requests and reasons for declining data sharing. Although data sharing has improved in the last decade and particularly in recent years, data availability and willingness to share data still differ greatly among disciplines. We observed that statements of data availability upon (reasonable) request are inefficient and should not be allowed by journals. To improve data sharing at the time of manuscript acceptance, researchers should be better motivated to release their data with real benefits such as recognition, or bonus points in grant and job applications. We recommend that data management costs should be covered by funding agencies; publicly available research data ought to be included in the evaluation of application...
Common practices and several studies have demonstrated the positive effect of biochar amendment o... more Common practices and several studies have demonstrated the positive effect of biochar amendment on climate change mitigation, soil properties, and plant growth. We performed a greenhouse experiment to assess the potential of wood biochar to improve the properties of the growing media and the growth of seedlings in boreal tree species. We added willow biochar (0%, 5%, 10%, and 20%) to raw peat and measured the growth of Norway spruce (Picea abies (L.) H. Karst.), Scots pine (Pinus sylvestris L.), and silver birch (Betula pendula Roth) seedlings. In addition, the co-effect of biochar amendment with 0%, 50%, and 100% fertilization was estimated. We found that using up to 10% of biochar did not reduce the water retention capacity of the growing media significantly. Moreover, biochar amendment significantly increased carbon, nitrogen, potassium, and phosphorus concentrations and had a significant liming effect on the growing media. The biochar amendment increased the aboveground growth o...
Fire is a major natural disturbance factor in boreal forests, and the frequency of forest fires i... more Fire is a major natural disturbance factor in boreal forests, and the frequency of forest fires is predicted to increase due to climate change. Nitrogen (N) is a key determinant of carbon sequestration in boreal forests because the shortage of N limits tree growth. We studied changes in N pools and fluxes, and the overall N balance across a 155-year non stand-replacing fire chronosequence in sub-arctic Pinus sylvestris forests in Finland. Two years after the fire, total ecosystem N pool was 622 kg ha-1 of which 16% was in the vegetation, 8% in the dead biomass and 76% in the soil. 155 years after the fire, total N pool was 960 kg ha-1, with 27% in the vegetation, 3% in the dead biomass and 69% in the soil. This implies an annual accumulation rate of 2.28 kg ha-1 which was distributed equally between soil and biomass. The observed changes in N pools were consistent with the computed N balance +2.11 kg ha-1 yr-1 over the 155-year post-fire period. Nitrogen deposition was an important ...
Soil microbial responses to fire are likely to change over the course of forest recovery. Investi... more Soil microbial responses to fire are likely to change over the course of forest recovery. Investigations on long-term changes in bacterial dynamics following fire are rare. We characterized the soil bacterial communities across three different times post fire in a 2 to 152-year fire chronosequence by Illumina MiSeq sequencing, coupled with a functional gene array (GeoChip). The results showed that the bacterial diversity did not differ between the recently and older burned areas, suggesting a concomitant recovery in the bacterial diversity after fire. The differences in bacterial communities over time were mainly driven by the rare operational taxonomic units (OTUs < 0.1%). Proteobacteria (39%), Acidobacteria (34%) and Actinobacteria (17%) were the most abundant phyla across all sites. Genes involved in C and N cycling pathways were present in all sites showing high redundancy in the gene profiles. However, hierarchical cluster analysis using gene signal intensity revealed that t...
ABSTRACT Fire is the primary process which organizes the physical and biological attributes of th... more ABSTRACT Fire is the primary process which organizes the physical and biological attributes of the boreal biome and influences energy flows and biogeochemical cycles, particularly the carbon and nitrogen cycle. We established a forest fire chronosequence in the northern boreal forest in Lapland (Värriö Strict Nature Reserve), Finland (67°46&#39; N, 29°35&#39; E) that spans 160 years. Soil organic matter and its turnover were measured in and ex situ, as well as biomass of trees. The fungal biomass was assessed using soil ergosterol contents. The results indicate that fires slow down the turnover of soil organic matter for a period of at least 50 years. The turnover rate in recently burnt sites was only half of the turnover of the old forest site. Decreases in the turnover where still substantial 50 years after fire. The slow recovery of fungal biomass after fires seems to be the cause of the decrease since sites with a higher concentration of fungal biomass in the soils had shorter soil organic matter turnover rates. Increases in stand foliar biomass were less important for the turnover of soil organic matter. We tried to explore the potential importance of our finding using a simple data driven simulation model that estimates soil carbon dynamic from litter input and the measured soil carbon turnover times. The results indicate the initial post-fire slowdown of soil carbon turnover is an important component of the boreal carbon cycle. Using our fire intervals the simulated soil carbon stocks with a lower post-fire soil organic matter turnover were up to 15 % larger than simulations assuming a constant carbon turnover rate. Our sensitivity analysis indicates that the effects will be larger in areas with frequent fires. We do not know which environmental factors cause the delay in the turnover time and the effects of fires on post fire soil organic matter turnover could be considerably smaller or larger. Altogether our results fit well to published results from laboratory studies and show that post-fire depression of microbial activities are important on the ecosystem and landscape level. Since fire frequencies in boreal forests will increase in many areas as the result of climate change, it will be important to better understand the effects of fire on the soil carbon turnover and to incorporate it into carbon cycle models.
Data sharing is one of the cornerstones of modern science that enables large-scale analyses and r... more Data sharing is one of the cornerstones of modern science that enables large-scale analyses and reproducibility. We evaluated data availability in research articles across nine disciplines in Nature and Science magazines and recorded corresponding authors’ concerns, requests and reasons for declining data sharing. Although data sharing has improved in the last decade and particularly in recent years, data availability and willingness to share data still differ greatly among disciplines. We observed that statements of data availability upon (reasonable) request are inefficient and should not be allowed by journals. To improve data sharing at the time of manuscript acceptance, researchers should be better motivated to release their data with real benefits such as recognition, or bonus points in grant and job applications. We recommend that data management costs should be covered by funding agencies; publicly available research data ought to be included in the evaluation of application...
Common practices and several studies have demonstrated the positive effect of biochar amendment o... more Common practices and several studies have demonstrated the positive effect of biochar amendment on climate change mitigation, soil properties, and plant growth. We performed a greenhouse experiment to assess the potential of wood biochar to improve the properties of the growing media and the growth of seedlings in boreal tree species. We added willow biochar (0%, 5%, 10%, and 20%) to raw peat and measured the growth of Norway spruce (Picea abies (L.) H. Karst.), Scots pine (Pinus sylvestris L.), and silver birch (Betula pendula Roth) seedlings. In addition, the co-effect of biochar amendment with 0%, 50%, and 100% fertilization was estimated. We found that using up to 10% of biochar did not reduce the water retention capacity of the growing media significantly. Moreover, biochar amendment significantly increased carbon, nitrogen, potassium, and phosphorus concentrations and had a significant liming effect on the growing media. The biochar amendment increased the aboveground growth o...
Fire is a major natural disturbance factor in boreal forests, and the frequency of forest fires i... more Fire is a major natural disturbance factor in boreal forests, and the frequency of forest fires is predicted to increase due to climate change. Nitrogen (N) is a key determinant of carbon sequestration in boreal forests because the shortage of N limits tree growth. We studied changes in N pools and fluxes, and the overall N balance across a 155-year non stand-replacing fire chronosequence in sub-arctic Pinus sylvestris forests in Finland. Two years after the fire, total ecosystem N pool was 622 kg ha-1 of which 16% was in the vegetation, 8% in the dead biomass and 76% in the soil. 155 years after the fire, total N pool was 960 kg ha-1, with 27% in the vegetation, 3% in the dead biomass and 69% in the soil. This implies an annual accumulation rate of 2.28 kg ha-1 which was distributed equally between soil and biomass. The observed changes in N pools were consistent with the computed N balance +2.11 kg ha-1 yr-1 over the 155-year post-fire period. Nitrogen deposition was an important ...
Soil microbial responses to fire are likely to change over the course of forest recovery. Investi... more Soil microbial responses to fire are likely to change over the course of forest recovery. Investigations on long-term changes in bacterial dynamics following fire are rare. We characterized the soil bacterial communities across three different times post fire in a 2 to 152-year fire chronosequence by Illumina MiSeq sequencing, coupled with a functional gene array (GeoChip). The results showed that the bacterial diversity did not differ between the recently and older burned areas, suggesting a concomitant recovery in the bacterial diversity after fire. The differences in bacterial communities over time were mainly driven by the rare operational taxonomic units (OTUs < 0.1%). Proteobacteria (39%), Acidobacteria (34%) and Actinobacteria (17%) were the most abundant phyla across all sites. Genes involved in C and N cycling pathways were present in all sites showing high redundancy in the gene profiles. However, hierarchical cluster analysis using gene signal intensity revealed that t...
ABSTRACT Fire is the primary process which organizes the physical and biological attributes of th... more ABSTRACT Fire is the primary process which organizes the physical and biological attributes of the boreal biome and influences energy flows and biogeochemical cycles, particularly the carbon and nitrogen cycle. We established a forest fire chronosequence in the northern boreal forest in Lapland (Värriö Strict Nature Reserve), Finland (67°46&#39; N, 29°35&#39; E) that spans 160 years. Soil organic matter and its turnover were measured in and ex situ, as well as biomass of trees. The fungal biomass was assessed using soil ergosterol contents. The results indicate that fires slow down the turnover of soil organic matter for a period of at least 50 years. The turnover rate in recently burnt sites was only half of the turnover of the old forest site. Decreases in the turnover where still substantial 50 years after fire. The slow recovery of fungal biomass after fires seems to be the cause of the decrease since sites with a higher concentration of fungal biomass in the soils had shorter soil organic matter turnover rates. Increases in stand foliar biomass were less important for the turnover of soil organic matter. We tried to explore the potential importance of our finding using a simple data driven simulation model that estimates soil carbon dynamic from litter input and the measured soil carbon turnover times. The results indicate the initial post-fire slowdown of soil carbon turnover is an important component of the boreal carbon cycle. Using our fire intervals the simulated soil carbon stocks with a lower post-fire soil organic matter turnover were up to 15 % larger than simulations assuming a constant carbon turnover rate. Our sensitivity analysis indicates that the effects will be larger in areas with frequent fires. We do not know which environmental factors cause the delay in the turnover time and the effects of fires on post fire soil organic matter turnover could be considerably smaller or larger. Altogether our results fit well to published results from laboratory studies and show that post-fire depression of microbial activities are important on the ecosystem and landscape level. Since fire frequencies in boreal forests will increase in many areas as the result of climate change, it will be important to better understand the effects of fire on the soil carbon turnover and to incorporate it into carbon cycle models.
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