Riverine dissolved silicon (DSi) and biogenic silica (BSi) are modulated along the estuarine grad... more Riverine dissolved silicon (DSi) and biogenic silica (BSi) are modulated along the estuarine gradient by several biotic and abiotic processes governed by physical forcings. An important area controlling silicon transport in alluvial estuaries with large intertidal mudflats is the benthic diatom-dominated biofilm system. Here, the hypertidal Severn Estuary, UK, has been used as a case study to improve our understanding of silicon transport in these benthic-dominated systems. We present the first time-series dataset of Si concentrations in the Severn. River and tidal hydrodynamics drove spatio-temporal changes in DSi. The longitudinal profile of DSi followed the classical view of dilution with downstream transport. Despite low riverine supply of BSi and low siliceous-phytoplankton production, relatively high BSi concentrations were measured in the Severn Estuary (maximum of 14.9 mg/L), which accounted for over 70% of the total bioavailable silicon present and were characterised by iso...
Impacts of widespread release of engineered titanium dioxide nanoparticles (nTiO2) on freshwater ... more Impacts of widespread release of engineered titanium dioxide nanoparticles (nTiO2) on freshwater phytoplankton and phytobenthic assemblages in the field, represents a significant knowledge gap. Using outdoor experiments, we quantified impacts of nTiO2 on phytoplankton and periphyton from UK rivers, applied at levels representative of environmentally realistic concentrations (0.05 mg/L) and hot spots of accumulation (5.0 mg/L). Addition of nTiO2 to river water led to rapid temporal size changes in homoagglomerates and many heteroaggregates of nTiO2 with algae in the phytoplankton, including green algae, pennate and centric diatoms, increasing settlement in some cells. Changes in phytoplankton composition were evident after 72 h resulting from a significant decline in the relative abundance of very small phytoplankton (1-3 μm), often accompanied by increases in centric diatoms at both concentrations. Significant changes detected in the composition of the phytobenthos after 12 days, were not evident when using benthic diatoms alone. A lack of inhibition in the maximum quantum yield (Fv/Fm) in phytobenthos after 72-h exposures contrasted with a significant inhibition in Fv/Fm in 75% of phytoplankton samples, the highest recorded in Rutile nTiO2 exposures at both concentrations of nTiO2. After 12 days the strong positive stimulatory responses recorded in the maximum relative electron transport rate (rETRmax) and the maximum non-photochemical coefficient (NPQmax), in phytoplankton and phytobenthos samples exposed to the higher Anatase nTiO2 concentration, were not measured in Rutile exposed biota. Collectively, these results indicate that the Rutile phase of nTiO2 has more negative impacts on freshwater algae than the Anatase form, at specific time scales, and phytoplankton may be more impacted by nTiO2 than phytobenthos. We caution that repeated release of nTiO2, could lead to significant changes in biomass and algal composition, dependent on the phase and concentration of nTiO2.
Antarctic perennially ice-covered lakes provide a stable low-disturbance environment where comple... more Antarctic perennially ice-covered lakes provide a stable low-disturbance environment where complex microbially mediated structures can grow. Lake Untersee, an ultra-oligotrophic lake in East Antarctica, has the lake floor covered in benthic microbial mat communities, where laminated organo-sedimentary structures form with three distinct, sympatric morphologies: small, elongated cuspate pinnacles, large complex cones and flat mats. We examined the diversity of prokaryotes and eukaryotes in pinnacles, cones and flat microbial mats using high-throughput sequencing of 16S and 18S rRNA genes and assessed how microbial composition may underpin the formation of these distinct macroscopic mat morphologies under the same environmental conditions. Our analysis identified distinct clustering of microbial communities according to mat morphology. The prokaryotic communities were dominated by Cyanobacteria, Proteobacteria, Verrucomicrobia, Planctomycetes, and Actinobacteria. While filamentous Tyc...
Distant glacial areas are interconnected by a complex system of fractures and water channels whic... more Distant glacial areas are interconnected by a complex system of fractures and water channels which run in the glacier interior and characterize the englacial realm. Water can slowly freeze in these channels where the slow freezing excludes air bubbles giving the ice a clear aspect. This ice is uplifted to the surface ablation zone by glacial movements and can therefore be observed in the form of clear surface ice bands. We employed an indirect method to sample englacial water by coring these ice bands. We were able, for the first time, to compare microbial communities sampled from clear (i.e. frozen englacial water bands) and cloudy ice (i.e. meteoric ice) through 16S rRNA gene sequencing. Although microbial communities were primarily shaped and structured by their spatial distribution on the glacier, ice type was a clear secondary factor. One area of the glacier, in particular, presented significant microbial community clear/cloudy ice differences. Although the clear ice and suprag...
Melting of the Greenland Ice Sheet is a leading cause of land-ice mass loss and cryosphere-attrib... more Melting of the Greenland Ice Sheet is a leading cause of land-ice mass loss and cryosphere-attributed sea level rise. Blooms of pigmented glacier ice algae lower ice albedo and accelerate surface melting in the ice sheet’s southwest sector. Although glacier ice algae cause up to 13% of the surface melting in this region, the controls on bloom development remain poorly understood. Here we show a direct link between mineral phosphorus in surface ice and glacier ice algae biomass through the quantification of solid and fluid phase phosphorus reservoirs in surface habitats across the southwest ablation zone of the ice sheet. We demonstrate that nutrients from mineral dust likely drive glacier ice algal growth, and thereby identify mineral dust as a secondary control on ice sheet melting.
From global food security to textile production and biofuels, the demands currently made on plant... more From global food security to textile production and biofuels, the demands currently made on plant photosynthetic productivity will continue to increase. Enhancing photosynthesis using designer, green and sustainable materials offers an attractive alternative to current genetic-based strategies and promising work with nanomaterials has recently started to emerge. Here we describe in planta use of carbon-based nanoparticles produced by low-cost renewable routes that are bioavailable to mature plants. Uptake of these functionalised nanoparticles from the soil improves photosynthesis and also increases crop production. We show for the first time that glucose-functionalization enhances nanoparticle uptake, photoprotection and pigment production, unlocking enhanced yields. This is demonstrated in Triticum aestivum Apogee (dwarf bread wheat) and results in an 18% increase in grain yield. This establishes the viability of a functional nanomaterial to augment photosynthesis as a route to inc...
Background – The microscopic world of the freshwater biofilm is a complex association of organism... more Background – The microscopic world of the freshwater biofilm is a complex association of organisms from prokaryotes to metazoans. Understanding the relationships between these organisms, and between them and their environment, is complicated by the processes by which biofilms are studied. Whilst it is possible to observe and minutely describe the individual organisms which comprise biofilms, inter-relationships within the ‘community’ are often destroyed during sample collection and investigation under the microscope. Ecologists often focus on particular groups of organisms (e.g. diatoms) and interrogate data using multivariate statistics. This offers valuable insights that enable us to understand how associations of particular taxonomic groups respond to key environmental gradients yet offers an essentially abstract view of the microscopic world. Approach – In this essay we contrast the great detail achieved when we see and describe individual cells with the gross approximations nec...
Prediction of high latitude response to climate change is hampered by poor understanding of the r... more Prediction of high latitude response to climate change is hampered by poor understanding of the role of nonlinear changes in ecosystem forcing and response. While the effects of nonlinear climate change are often delayed or dampened by internal ecosystem dynamics, recent warming events in the Arctic have driven rapid environmental response, raising questions of how terrestrial and freshwater systems in this region may shift in response to abrupt climate change. We quantified environmental responses to recent abrupt climate change in West Greenland using long-term monitoring and paleoecological reconstructions. Using >40 years of weather data, we found that after 1994, mean June air temperatures shifted 2.2 °C higher and mean winter precipitation doubled from 21 to 40 mm; since 2006, mean July air temperatures shifted 1.1 °C higher. Nonlinear environmental responses occurred with or shortly after these abrupt climate shifts, including increasing ice sheet discharge, increasing dus...
Surface ablation of the Greenland ice sheet is amplified by surface darkening caused by light‐abs... more Surface ablation of the Greenland ice sheet is amplified by surface darkening caused by light‐absorbing impurities such as mineral dust, black carbon, and pigmented microbial cells. We present the first quantitative assessment of the microbial contribution to the ice sheet surface darkening, based on field measurements of surface reflectance and concentrations of light‐absorbing impurities, including pigmented algae, during the 2014 melt season in the southwestern part of the ice sheet. The impact of algae on bare ice darkening in the study area was greater than that of nonalgal impurities and yielded a net albedo reduction of 0.038 ± 0.0035 for each algal population doubling. We argue that algal growth is a crucial control of bare ice darkening, and incorporating the algal darkening effect will improve mass balance and sea level projections of the Greenland ice sheet and ice masses elsewhere.
Understanding and predicting the likely consequences of anthropogenic disturbance on species and ... more Understanding and predicting the likely consequences of anthropogenic disturbance on species and ecosystems is a major prerequisite of achieving the sustainable use of natural resources. It is also a key element in the management of sites with statutory designation. During planning and decision‐making processes involving potential disturbance issues, land managers and responsible authorities are often required to take account of the needs and views of a diversity of site user groups. The effects and impacts of disturbance can occur over a range of spatial and temporal scales, and research into these consequences must address this problem. This paper provides (1) an overview of the field and analytical methodologies contributing to the development of an integrated method for collecting multi‐scale bird, resource and disturbance data in freshwater systems, and (2) an overview of the drivers and need for such data in sustainable resource management. Whilst the results of the bird–habit...
Photosynthesis by microbes on the surfaces of glaciers and ice sheets has the potential to fix ca... more Photosynthesis by microbes on the surfaces of glaciers and ice sheets has the potential to fix carbon, alter the albedo of ice surfaces via the production of organic matter and so enhance ice melt. It could also be important for supplying labile organic matter and nutrients to in situ and downstream ecosystems. This study compares in situ 24 hour incubation methods for measuring rates of gross photosynthesis, respiration and net community production (NCP) in cryoconite holes on three Svalbard valley glaciers. Rates of gross photosynthesis and respiration measured by the ΔCO2 method were closely balanced, resulting in rates of NCP close to the detection limit (mean of –1.3 μg C g−1 d–1) consistent with previous measurements in Arctic cryoconite holes. This suggests that organic matter within cryoconite holes may be derived largely from allochthonous sources. The molar ratio of ΔO2 to ΔCO2 in incubations gave mean respiratory and photosynthetic quotients of 0.80 ± 0.17 (1 × SD) and 1....
The living prokaryotic microbiome of the calcified geniculate (articulated) red alga, Corallina o... more The living prokaryotic microbiome of the calcified geniculate (articulated) red alga, Corallina officinalis from the intertidal seashore is characterised for the first time based on the V6 hypervariable region of 16S rRNA. Results revealed an extraordinary diversity of bacteria associated with the microbiome. Thirty-five prokaryotic phyla were recovered, of which Proteobacteria, Cyanobacteria, Bacteroidetes, Actinobacteria, Planctomycetes, Acidobacteria, Verrucomicrobia, Firmicutes and Chloroflexi made up the core microbiome. Unclassified sequences made up twenty-five percent of sequences suggesting insufficient sampling of the world's oceans/macroalgae. The greatest diversity in the microbiome was on the upper shore, followed by the lower shore then the middle shore, although the microbiome community composition did not vary between shore levels. The C. officinalis core microbiome was broadly similar in composition to those reported in the literature for crustose coralline alga...
Riverine dissolved silicon (DSi) and biogenic silica (BSi) are modulated along the estuarine grad... more Riverine dissolved silicon (DSi) and biogenic silica (BSi) are modulated along the estuarine gradient by several biotic and abiotic processes governed by physical forcings. An important area controlling silicon transport in alluvial estuaries with large intertidal mudflats is the benthic diatom-dominated biofilm system. Here, the hypertidal Severn Estuary, UK, has been used as a case study to improve our understanding of silicon transport in these benthic-dominated systems. We present the first time-series dataset of Si concentrations in the Severn. River and tidal hydrodynamics drove spatio-temporal changes in DSi. The longitudinal profile of DSi followed the classical view of dilution with downstream transport. Despite low riverine supply of BSi and low siliceous-phytoplankton production, relatively high BSi concentrations were measured in the Severn Estuary (maximum of 14.9 mg/L), which accounted for over 70% of the total bioavailable silicon present and were characterised by iso...
Impacts of widespread release of engineered titanium dioxide nanoparticles (nTiO2) on freshwater ... more Impacts of widespread release of engineered titanium dioxide nanoparticles (nTiO2) on freshwater phytoplankton and phytobenthic assemblages in the field, represents a significant knowledge gap. Using outdoor experiments, we quantified impacts of nTiO2 on phytoplankton and periphyton from UK rivers, applied at levels representative of environmentally realistic concentrations (0.05 mg/L) and hot spots of accumulation (5.0 mg/L). Addition of nTiO2 to river water led to rapid temporal size changes in homoagglomerates and many heteroaggregates of nTiO2 with algae in the phytoplankton, including green algae, pennate and centric diatoms, increasing settlement in some cells. Changes in phytoplankton composition were evident after 72 h resulting from a significant decline in the relative abundance of very small phytoplankton (1-3 μm), often accompanied by increases in centric diatoms at both concentrations. Significant changes detected in the composition of the phytobenthos after 12 days, were not evident when using benthic diatoms alone. A lack of inhibition in the maximum quantum yield (Fv/Fm) in phytobenthos after 72-h exposures contrasted with a significant inhibition in Fv/Fm in 75% of phytoplankton samples, the highest recorded in Rutile nTiO2 exposures at both concentrations of nTiO2. After 12 days the strong positive stimulatory responses recorded in the maximum relative electron transport rate (rETRmax) and the maximum non-photochemical coefficient (NPQmax), in phytoplankton and phytobenthos samples exposed to the higher Anatase nTiO2 concentration, were not measured in Rutile exposed biota. Collectively, these results indicate that the Rutile phase of nTiO2 has more negative impacts on freshwater algae than the Anatase form, at specific time scales, and phytoplankton may be more impacted by nTiO2 than phytobenthos. We caution that repeated release of nTiO2, could lead to significant changes in biomass and algal composition, dependent on the phase and concentration of nTiO2.
Antarctic perennially ice-covered lakes provide a stable low-disturbance environment where comple... more Antarctic perennially ice-covered lakes provide a stable low-disturbance environment where complex microbially mediated structures can grow. Lake Untersee, an ultra-oligotrophic lake in East Antarctica, has the lake floor covered in benthic microbial mat communities, where laminated organo-sedimentary structures form with three distinct, sympatric morphologies: small, elongated cuspate pinnacles, large complex cones and flat mats. We examined the diversity of prokaryotes and eukaryotes in pinnacles, cones and flat microbial mats using high-throughput sequencing of 16S and 18S rRNA genes and assessed how microbial composition may underpin the formation of these distinct macroscopic mat morphologies under the same environmental conditions. Our analysis identified distinct clustering of microbial communities according to mat morphology. The prokaryotic communities were dominated by Cyanobacteria, Proteobacteria, Verrucomicrobia, Planctomycetes, and Actinobacteria. While filamentous Tyc...
Distant glacial areas are interconnected by a complex system of fractures and water channels whic... more Distant glacial areas are interconnected by a complex system of fractures and water channels which run in the glacier interior and characterize the englacial realm. Water can slowly freeze in these channels where the slow freezing excludes air bubbles giving the ice a clear aspect. This ice is uplifted to the surface ablation zone by glacial movements and can therefore be observed in the form of clear surface ice bands. We employed an indirect method to sample englacial water by coring these ice bands. We were able, for the first time, to compare microbial communities sampled from clear (i.e. frozen englacial water bands) and cloudy ice (i.e. meteoric ice) through 16S rRNA gene sequencing. Although microbial communities were primarily shaped and structured by their spatial distribution on the glacier, ice type was a clear secondary factor. One area of the glacier, in particular, presented significant microbial community clear/cloudy ice differences. Although the clear ice and suprag...
Melting of the Greenland Ice Sheet is a leading cause of land-ice mass loss and cryosphere-attrib... more Melting of the Greenland Ice Sheet is a leading cause of land-ice mass loss and cryosphere-attributed sea level rise. Blooms of pigmented glacier ice algae lower ice albedo and accelerate surface melting in the ice sheet’s southwest sector. Although glacier ice algae cause up to 13% of the surface melting in this region, the controls on bloom development remain poorly understood. Here we show a direct link between mineral phosphorus in surface ice and glacier ice algae biomass through the quantification of solid and fluid phase phosphorus reservoirs in surface habitats across the southwest ablation zone of the ice sheet. We demonstrate that nutrients from mineral dust likely drive glacier ice algal growth, and thereby identify mineral dust as a secondary control on ice sheet melting.
From global food security to textile production and biofuels, the demands currently made on plant... more From global food security to textile production and biofuels, the demands currently made on plant photosynthetic productivity will continue to increase. Enhancing photosynthesis using designer, green and sustainable materials offers an attractive alternative to current genetic-based strategies and promising work with nanomaterials has recently started to emerge. Here we describe in planta use of carbon-based nanoparticles produced by low-cost renewable routes that are bioavailable to mature plants. Uptake of these functionalised nanoparticles from the soil improves photosynthesis and also increases crop production. We show for the first time that glucose-functionalization enhances nanoparticle uptake, photoprotection and pigment production, unlocking enhanced yields. This is demonstrated in Triticum aestivum Apogee (dwarf bread wheat) and results in an 18% increase in grain yield. This establishes the viability of a functional nanomaterial to augment photosynthesis as a route to inc...
Background – The microscopic world of the freshwater biofilm is a complex association of organism... more Background – The microscopic world of the freshwater biofilm is a complex association of organisms from prokaryotes to metazoans. Understanding the relationships between these organisms, and between them and their environment, is complicated by the processes by which biofilms are studied. Whilst it is possible to observe and minutely describe the individual organisms which comprise biofilms, inter-relationships within the ‘community’ are often destroyed during sample collection and investigation under the microscope. Ecologists often focus on particular groups of organisms (e.g. diatoms) and interrogate data using multivariate statistics. This offers valuable insights that enable us to understand how associations of particular taxonomic groups respond to key environmental gradients yet offers an essentially abstract view of the microscopic world. Approach – In this essay we contrast the great detail achieved when we see and describe individual cells with the gross approximations nec...
Prediction of high latitude response to climate change is hampered by poor understanding of the r... more Prediction of high latitude response to climate change is hampered by poor understanding of the role of nonlinear changes in ecosystem forcing and response. While the effects of nonlinear climate change are often delayed or dampened by internal ecosystem dynamics, recent warming events in the Arctic have driven rapid environmental response, raising questions of how terrestrial and freshwater systems in this region may shift in response to abrupt climate change. We quantified environmental responses to recent abrupt climate change in West Greenland using long-term monitoring and paleoecological reconstructions. Using >40 years of weather data, we found that after 1994, mean June air temperatures shifted 2.2 °C higher and mean winter precipitation doubled from 21 to 40 mm; since 2006, mean July air temperatures shifted 1.1 °C higher. Nonlinear environmental responses occurred with or shortly after these abrupt climate shifts, including increasing ice sheet discharge, increasing dus...
Surface ablation of the Greenland ice sheet is amplified by surface darkening caused by light‐abs... more Surface ablation of the Greenland ice sheet is amplified by surface darkening caused by light‐absorbing impurities such as mineral dust, black carbon, and pigmented microbial cells. We present the first quantitative assessment of the microbial contribution to the ice sheet surface darkening, based on field measurements of surface reflectance and concentrations of light‐absorbing impurities, including pigmented algae, during the 2014 melt season in the southwestern part of the ice sheet. The impact of algae on bare ice darkening in the study area was greater than that of nonalgal impurities and yielded a net albedo reduction of 0.038 ± 0.0035 for each algal population doubling. We argue that algal growth is a crucial control of bare ice darkening, and incorporating the algal darkening effect will improve mass balance and sea level projections of the Greenland ice sheet and ice masses elsewhere.
Understanding and predicting the likely consequences of anthropogenic disturbance on species and ... more Understanding and predicting the likely consequences of anthropogenic disturbance on species and ecosystems is a major prerequisite of achieving the sustainable use of natural resources. It is also a key element in the management of sites with statutory designation. During planning and decision‐making processes involving potential disturbance issues, land managers and responsible authorities are often required to take account of the needs and views of a diversity of site user groups. The effects and impacts of disturbance can occur over a range of spatial and temporal scales, and research into these consequences must address this problem. This paper provides (1) an overview of the field and analytical methodologies contributing to the development of an integrated method for collecting multi‐scale bird, resource and disturbance data in freshwater systems, and (2) an overview of the drivers and need for such data in sustainable resource management. Whilst the results of the bird–habit...
Photosynthesis by microbes on the surfaces of glaciers and ice sheets has the potential to fix ca... more Photosynthesis by microbes on the surfaces of glaciers and ice sheets has the potential to fix carbon, alter the albedo of ice surfaces via the production of organic matter and so enhance ice melt. It could also be important for supplying labile organic matter and nutrients to in situ and downstream ecosystems. This study compares in situ 24 hour incubation methods for measuring rates of gross photosynthesis, respiration and net community production (NCP) in cryoconite holes on three Svalbard valley glaciers. Rates of gross photosynthesis and respiration measured by the ΔCO2 method were closely balanced, resulting in rates of NCP close to the detection limit (mean of –1.3 μg C g−1 d–1) consistent with previous measurements in Arctic cryoconite holes. This suggests that organic matter within cryoconite holes may be derived largely from allochthonous sources. The molar ratio of ΔO2 to ΔCO2 in incubations gave mean respiratory and photosynthetic quotients of 0.80 ± 0.17 (1 × SD) and 1....
The living prokaryotic microbiome of the calcified geniculate (articulated) red alga, Corallina o... more The living prokaryotic microbiome of the calcified geniculate (articulated) red alga, Corallina officinalis from the intertidal seashore is characterised for the first time based on the V6 hypervariable region of 16S rRNA. Results revealed an extraordinary diversity of bacteria associated with the microbiome. Thirty-five prokaryotic phyla were recovered, of which Proteobacteria, Cyanobacteria, Bacteroidetes, Actinobacteria, Planctomycetes, Acidobacteria, Verrucomicrobia, Firmicutes and Chloroflexi made up the core microbiome. Unclassified sequences made up twenty-five percent of sequences suggesting insufficient sampling of the world's oceans/macroalgae. The greatest diversity in the microbiome was on the upper shore, followed by the lower shore then the middle shore, although the microbiome community composition did not vary between shore levels. The C. officinalis core microbiome was broadly similar in composition to those reported in the literature for crustose coralline alga...
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